You are here

Home

ATCC64974_56320-T1, ATCC64974_56320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56320-T1
Unique NameATCC64974_56320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4303447..4305162+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56320-T1 ID=ATCC64974_56320-T1|Name=ATCC64974_56320-T1|organism=Aspergillus niger N402|type=mRNA|length=1716bp|location=Sequence derived from alignment at OGUI01000007.1:4303447..4305162+ (Aspergillus niger N402)
ATGCCCTATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATC
TTTCTTGTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGG
ATTCCTTTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGT
ATTGTTGCGTCCTATAATGGTTCGGACACCCGCGCCGATCACAACTTCTT
CGCATTTCATCTCCGGCTGACATTCTGCAGGCGGTGCTATTCTAGGCTCG
GTTTTTGTCTCCTACCTCTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTT
CACCGGCGGCCTCCTCGCTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTG
TCAACGTGGCCATGCTCATTGCCGGCCGTTTGATCGCTGGTCTTGCTATT
GGGTTGATGTCCGCCATCATTCCAGTCTATTGTGTATGTATCGCTATAAC
GCATCTCTATGTAATCACTAGATTGCCGCGGGCTCTGACTGCTCTCCCAG
AGTGAGCTATCTCCTCCCCGTATTCGTGGCTTCTTAGGTTCACTGCAGCA
ATGGATGATTGGACTCGGAGTTGTTGTAGCTGTGAGTGATTTATCTATCT
ACTATACCCCTGTCTGGCTAGTCCGCTAGTCAACTACTAGCTCGCCCTCA
ATCCCTGACTAATCGCCTCCAGCAATGGGTGGGATACGGCTGTTCGCTTC
GTACAGGAGATTTCAGCTGGAGTTTCCCCTTGGCATTTCAAGCAGTCCCC
GCCGTGATTCTTAGCTGTGGCGTCTGGTTTCTCCCTGAGTCCCCTCGTTG
GCTCATAGAAAAGGGCAACCCAGATGCTGGTTGGGCGGTCTTGAACCGCC
TCCATCTACCTCGGGGACAGCTGAATGCTCTACCAGTCGAATCGGAATTC
GAGCGAATCTCCGCGGGTATTGCGGAGGCCCGGCATTCAGCCAACCACTC
CTGGCGACAGCTTTTGTTCGCACAGCCTAATTGGCGCAAGCGTGTGCTGC
TTGCCTGTGGCATGCAGGTTTTCACACAATGCTCGGGCACGAATGTGCTC
CAGAATTATAACCCAGGATTATACCGATCCTTGGGCTTGTCGCAGTCCAC
ATCGCTCATCCTGCAGGGCATCTGGGGTGCATTGGCTCAGTTTTGGAACA
CCGTATTCATACTCTTCATCGATCGGGTCGACCGTCGCAAGCTTCTCATT
CCGTCGTTGCTGGGTATGGGCGCCACCATGTGCGTGGAGGCCATCTTGGG
GCAGGTGTACAATAACTTTGAAAGCGTGGCGTCACCGAATCACAGTGCCG
TTCGTGCTGCAATCGCTGTATTCTTCGTCTTCTCTTTCTTCTATACTAGT
CTCGGGCTCATCTCTTGGATCTATCAATCCGAAATTTTCCCCACTGCTAT
TCGCGCCCGGGGCTCTTCTGTAGCCACCGCCACGAATTGGAGTCTGAATC
TGGTTTTCGCTCAGTGTTCGCCAATCGCCCAGTCACGAATTCAGTTCAAA
TATTTCTACTGTTTTGCGGCCTTCAACTGGGTTGCGGCGGGTCTCGTCTG
GACCTTCTATCCAGAGACCGCCGGCAAATCGCTCGAGGAAATTGACCGTC
TCTTTACTGCAGAAACCTCGATGCCCGCTTATGATGCAGACAAGCCTCAC
GTTTCACTGCCAAATTCAAAAGCTAAGGATTCTCTGGTGGTATTTAGCAC
ACAGGATACTACATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4303447..4305162+

>ATCC64974_56320-T1 ID=ATCC64974_56320-T1|Name=ATCC64974_56320-T1|organism=Aspergillus niger N402|type=CDS|length=5988bp|location=Sequence derived from alignment at OGUI01000007.1:4303447..4305162+ (Aspergillus niger N402)
ATGCCCTATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATC
TTTCTTGTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGG
ATTCCTTTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGT
ATTGTTGCGTCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTC
CTACCTCTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCC
TCCTCGCTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCC
ATGCTCATTGCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTC
CGCCATCATTCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTG
GCTTCTTAGGTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTA
GCTCAATGGGTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTG
GAGTTTCCCCTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTG
GCGTCTGGTTTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAAC
CCAGATGCTGGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACA
GCTGAATGCTCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTA
TTGCGGAGGCCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTC
GCACAGCCTAATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGT
TTTCACACAATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGAT
TATACCGATCCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGC
ATCTGGGGTGCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCAT
CGATCGGGTCGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGG
GCGCCACCATGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTT
GAAAGCGTGGCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGT
ATTCTTCGTCTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGA
TCTATCAATCCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCT
GTAGCCACCGCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTC
GCCAATCGCCCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGG
CCTTCAACTGGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACC
GCCGGCAAATCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTC
GATGCCCGCTTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAA
AAGCTAAGGATTCTCTGGTGGTATTTAGCACACAGGATACTACATAGATG
CCCTATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATCTTT
CTTGTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGGATT
CCTTTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGTATT
GTTGCGTCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTCCTA
CCTCTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCCTCC
TCGCTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCCATG
CTCATTGCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTCCGC
CATCATTCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTGGCT
TCTTAGGTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCT
CAATGGGTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTGGAG
TTTCCCCTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTGGCG
TCTGGTTTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAACCCA
GATGCTGGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACAGCT
GAATGCTCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTATTG
CGGAGGCCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTCGCA
CAGCCTAATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGTTTT
CACACAATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGATTAT
ACCGATCCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGCATC
TGGGGTGCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCATCGA
TCGGGTCGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGGGCG
CCACCATGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTTGAA
AGCGTGGCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGTATT
CTTCGTCTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGATCT
ATCAATCCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCTGTA
GCCACCGCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTCGCC
AATCGCCCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGGCCT
TCAACTGGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACCGCC
GGCAAATCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTCGAT
GCCCGCTTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAAAAG
CTAAGGATTCTCTGGTGGTATTTAGCACACAGGATACTACATAGATGCCC
TATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATCTTTCTT
GTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGGATTCCT
TTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGTATTGTT
GCGTCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTCCTACCT
CTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCCTCCTCG
CTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCCATGCTC
ATTGCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTCCGCCAT
CATTCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTGGCTTCT
TAGGTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCTCAA
TGGGTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTGGAGTTT
CCCCTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTGGCGTCT
GGTTTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAACCCAGAT
GCTGGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACAGCTGAA
TGCTCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTATTGCGG
AGGCCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTCGCACAG
CCTAATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGTTTTCAC
ACAATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGATTATACC
GATCCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGCATCTGG
GGTGCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCATCGATCG
GGTCGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGGGCGCCA
CCATGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTTGAAAGC
GTGGCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGTATTCTT
CGTCTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGATCTATC
AATCCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCTGTAGCC
ACCGCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTCGCCAAT
CGCCCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGGCCTTCA
ACTGGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACCGCCGGC
AAATCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTCGATGCC
CGCTTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAAAAGCTA
AGGATTCTCTGGTGGTATTTAGCACACAGGATACTACATAGATGCCCTAT
CTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATCTTTCTTGTT
TGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGGATTCCTTTA
GATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGTATTGTTGCG
TCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTCCTACCTCTC
TGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCCTCCTCGCTA
GCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCCATGCTCATT
GCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTCCGCCATCAT
TCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTGGCTTCTTAG
GTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCTCAATGG
GTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTGGAGTTTCCC
CTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTGGCGTCTGGT
TTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAACCCAGATGCT
GGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACAGCTGAATGC
TCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTATTGCGGAGG
CCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTCGCACAGCCT
AATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGTTTTCACACA
ATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGATTATACCGAT
CCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGCATCTGGGGT
GCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCATCGATCGGGT
CGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGGGCGCCACCA
TGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTTGAAAGCGTG
GCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGTATTCTTCGT
CTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGATCTATCAAT
CCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCTGTAGCCACC
GCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTCGCCAATCGC
CCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGGCCTTCAACT
GGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACCGCCGGCAAA
TCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTCGATGCCCGC
TTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAAAAGCTAAGG
ATTCTCTGGTGGTATTTAGCACACAGGATACTACATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_56320ATCC64974_56320Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56320-T1.exon1ATCC64974_56320-T1.exon1Aspergillus niger N402exon
ATCC64974_56320-T1.exon2ATCC64974_56320-T1.exon2Aspergillus niger N402exon
ATCC64974_56320-T1.exon3ATCC64974_56320-T1.exon3Aspergillus niger N402exon
ATCC64974_56320-T1.exon4ATCC64974_56320-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56320-T1.cdsATCC64974_56320-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56320-T1ATCC64974_56320-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4303447..4305162 +
Powered by Drupal