You are here

Home

ATCC64974_56430-T1, ATCC64974_56430-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56430-T1
Unique NameATCC64974_56430-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4328006..4329588-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56430-T1 ID=ATCC64974_56430-T1|Name=ATCC64974_56430-T1|organism=Aspergillus niger N402|type=mRNA|length=1583bp|location=Sequence derived from alignment at OGUI01000007.1:4328006..4329588- (Aspergillus niger N402)
ATGGGTCCCGAAGAACGCCTTAGGCTGCTTTTTGCGCGGGATGAAGACCT
CTTGAAGATGGACACTGGCCGCCGTCAGGCAACCGAATCTCGGCCCGTTG
ATGACACTGGTGGCCCTCAGACAGAGCATACCGAGAACCTGGGAAACAAG
CCTTCAGCTATAACTACCCAGAACACAACTCAACCCACTCAGATTGCGTC
TCCTGAACTCCCTTCTCCACCCAAGCTCCCTGCTCCAGCCCCGGCAGGTG
ACTCTCAATATGAACACGTATTTCCTCTCAACGGCCAGTTCAGCCCCCTT
TTGGCTATTGCCAAATATCCCTACAGACATATAAAAGGATCCTTGAGCCA
AGAGGTTTCCAGCCGCTTCTTCGACGCAGGTAAATTCTGGAACCGCTCGT
GGGATGTGTAAGTTGCTCTATTCACAGCTTTGCACAAGTAAATCTGATAA
GTGCCAGTTATTTTGTCCACGCACCAGCTTCTCTCGGATCTAAGCCTGTA
CTCCTTACTCCCACCGATGGAGTCAGTTCCTTCTTGGAAGAGATAAATCG
TGCTCTGAAGTGTGAATTGTCGTTGCCAGCAGATATGTCCGCCGGGCTTG
TCTTGTCTTTCAAAGATGGGTATCCTCAGCCTGTCTACCTCGGCCGCAGT
ACCACACGTGAGACCAAGGACCAGCTCGAGTTGCAAATTCCTTCACCATC
ATCGGAGCACAACAGTTCTTCTGGAGACATGGACGAGGAATACGCTGCTT
TCGAGACCATGGTGGAAGCCGCTATCGAGGCCACCAGGAACAAAAAGAAA
TCTTCCAAGCAGAAACTGTTGATGCGTGCGATGAAAGAGCTTGATATGCA
GCAGATGGTTCGACGGATGCAGTGCTACTTTGGTTTGCGTTCGATGGATG
ACATTGAAGGGACAGCAGACATGGGTGACTGGGATACCCCGGGCACAGTG
CCCACAGTGCAGCCGCTAGATGCCACCAAGGCAGTACCGTATCCTTTCTG
GAGAGAGCCCGTGTTTATCAGTATCGACGTAGAGTCGAATGAGCGCTGCC
ATAGCCAGGTGACTGAGGTCGGAGTGTCAGTGTTGGACATGCGGAGTCTG
GTGGGGGTTCCGCCGGGCGTGAACGGCGATCAGTGGCGGAGCCGTATCCA
GTCCCGGCATCTACGAGTGAGAGAATACGGCCATATCGTGAACCATGAGT
TCGTGTCGGGCTGTCCTGGCATGTTTCAGTTCGGAGAGAGCGAATGGGTG
CTGCAACGAGACTTGGTGGACGTAGTGCGATCAAGCCTGCGCTTGGGCGA
TGCACTGGACCGTCGCCTCGTATTGGTCGGCCACAATCTTTCAGCAGATG
TCAAGTATCTCAAGCAAGTTGGGGTGGATGTGGGAGGGTTTCGTGACCAG
ATCGACACAGCGCAGATGTTTCGCAAGCTGCGGAAGGAAGAGTCGGTACG
GTCGCTGGGAGGCGTGCTGGCGAAACTGGACATTAAGGGCTGGTACTTGC
ACAATGCCGGGAATGATGCGCGGTACACTATGGAGGTTCTCGTCGCCAGC
TTTATGGGAGCGAGTGAGGAAGACTCAGCGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4328006..4329588-

>ATCC64974_56430-T1 ID=ATCC64974_56430-T1|Name=ATCC64974_56430-T1|organism=Aspergillus niger N402|type=CDS|length=3066bp|location=Sequence derived from alignment at OGUI01000007.1:4328006..4329588- (Aspergillus niger N402)
TTATTTTGTCCACGCACCAGCTTCTCTCGGATCTAAGCCTGTACTCCTTA
CTCCCACCGATGGAGTCAGTTCCTTCTTGGAAGAGATAAATCGTGCTCTG
AAGTGTGAATTGTCGTTGCCAGCAGATATGTCCGCCGGGCTTGTCTTGTC
TTTCAAAGATGGGTATCCTCAGCCTGTCTACCTCGGCCGCAGTACCACAC
GTGAGACCAAGGACCAGCTCGAGTTGCAAATTCCTTCACCATCATCGGAG
CACAACAGTTCTTCTGGAGACATGGACGAGGAATACGCTGCTTTCGAGAC
CATGGTGGAAGCCGCTATCGAGGCCACCAGGAACAAAAAGAAATCTTCCA
AGCAGAAACTGTTGATGCGTGCGATGAAAGAGCTTGATATGCAGCAGATG
GTTCGACGGATGCAGTGCTACTTTGGTTTGCGTTCGATGGATGACATTGA
AGGGACAGCAGACATGGGTGACTGGGATACCCCGGGCACAGTGCCCACAG
TGCAGCCGCTAGATGCCACCAAGGCAGTACCGTATCCTTTCTGGAGAGAG
CCCGTGTTTATCAGTATCGACGTAGAGTCGAATGAGCGCTGCCATAGCCA
GGTGACTGAGGTCGGAGTGTCAGTGTTGGACATGCGGAGTCTGGTGGGGG
TTCCGCCGGGCGTGAACGGCGATCAGTGGCGGAGCCGTATCCAGTCCCGG
CATCTACGAGTGAGAGAATACGGCCATATCGTGAACCATGAGTTCGTGTC
GGGCTGTCCTGGCATGTTTCAGTTCGGAGAGAGCGAATGGGTGCTGCAAC
GAGACTTGGTGGACGTAGTGCGATCAAGCCTGCGCTTGGGCGATGCACTG
GACCGTCGCCTCGTATTGGTCGGCCACAATCTTTCAGCAGATGTCAAGTA
TCTCAAGCAAGTTGGGGTGGATGTGGGAGGGTTTCGTGACCAGATCGACA
CAGCGCAGATGTTTCGCAAGCTGCGGAAGGAAGAGTCGGTACGGTCGCTG
GGAGGCGTGCTGGCGAAACTGGACATTAAGGGCTGGTACTTGCACAATGC
CGGGAATGATGCGCGGTACACTATGGAGGTTCTCGTCGCCAGCTTTATGG
GAGCGAGTGAGGAAGACTCAGCGTAGATGGGTCCCGAAGAACGCCTTAGG
CTGCTTTTTGCGCGGGATGAAGACCTCTTGAAGATGGACACTGGCCGCCG
TCAGGCAACCGAATCTCGGCCCGTTGATGACACTGGTGGCCCTCAGACAG
AGCATACCGAGAACCTGGGAAACAAGCCTTCAGCTATAACTACCCAGAAC
ACAACTCAACCCACTCAGATTGCGTCTCCTGAACTCCCTTCTCCACCCAA
GCTCCCTGCTCCAGCCCCGGCAGGTGACTCTCAATATGAACACGTATTTC
CTCTCAACGGCCAGTTCAGCCCCCTTTTGGCTATTGCCAAATATCCCTAC
AGACATATAAAAGGATCCTTGAGCCAAGAGGTTTCCAGCCGCTTCTTCGA
CGCAGGTAAATTCTGGAACCGCTCGTGGGATGTTTATTTTGTCCACGCAC
CAGCTTCTCTCGGATCTAAGCCTGTACTCCTTACTCCCACCGATGGAGTC
AGTTCCTTCTTGGAAGAGATAAATCGTGCTCTGAAGTGTGAATTGTCGTT
GCCAGCAGATATGTCCGCCGGGCTTGTCTTGTCTTTCAAAGATGGGTATC
CTCAGCCTGTCTACCTCGGCCGCAGTACCACACGTGAGACCAAGGACCAG
CTCGAGTTGCAAATTCCTTCACCATCATCGGAGCACAACAGTTCTTCTGG
AGACATGGACGAGGAATACGCTGCTTTCGAGACCATGGTGGAAGCCGCTA
TCGAGGCCACCAGGAACAAAAAGAAATCTTCCAAGCAGAAACTGTTGATG
CGTGCGATGAAAGAGCTTGATATGCAGCAGATGGTTCGACGGATGCAGTG
CTACTTTGGTTTGCGTTCGATGGATGACATTGAAGGGACAGCAGACATGG
GTGACTGGGATACCCCGGGCACAGTGCCCACAGTGCAGCCGCTAGATGCC
ACCAAGGCAGTACCGTATCCTTTCTGGAGAGAGCCCGTGTTTATCAGTAT
CGACGTAGAGTCGAATGAGCGCTGCCATAGCCAGGTGACTGAGGTCGGAG
TGTCAGTGTTGGACATGCGGAGTCTGGTGGGGGTTCCGCCGGGCGTGAAC
GGCGATCAGTGGCGGAGCCGTATCCAGTCCCGGCATCTACGAGTGAGAGA
ATACGGCCATATCGTGAACCATGAGTTCGTGTCGGGCTGTCCTGGCATGT
TTCAGTTCGGAGAGAGCGAATGGGTGCTGCAACGAGACTTGGTGGACGTA
GTGCGATCAAGCCTGCGCTTGGGCGATGCACTGGACCGTCGCCTCGTATT
GGTCGGCCACAATCTTTCAGCAGATGTCAAGTATCTCAAGCAAGTTGGGG
TGGATGTGGGAGGGTTTCGTGACCAGATCGACACAGCGCAGATGTTTCGC
AAGCTGCGGAAGGAAGAGTCGGTACGGTCGCTGGGAGGCGTGCTGGCGAA
ACTGGACATTAAGGGCTGGTACTTGCACAATGCCGGGAATGATGCGCGGT
ACACTATGGAGGTTCTCGTCGCCAGCTTTATGGGAGCGAGTGAGGAAGAC
TCAGCGTAGATGGGTCCCGAAGAACGCCTTAGGCTGCTTTTTGCGCGGGA
TGAAGACCTCTTGAAGATGGACACTGGCCGCCGTCAGGCAACCGAATCTC
GGCCCGTTGATGACACTGGTGGCCCTCAGACAGAGCATACCGAGAACCTG
GGAAACAAGCCTTCAGCTATAACTACCCAGAACACAACTCAACCCACTCA
GATTGCGTCTCCTGAACTCCCTTCTCCACCCAAGCTCCCTGCTCCAGCCC
CGGCAGGTGACTCTCAATATGAACACGTATTTCCTCTCAACGGCCAGTTC
AGCCCCCTTTTGGCTATTGCCAAATATCCCTACAGACATATAAAAGGATC
CTTGAGCCAAGAGGTTTCCAGCCGCTTCTTCGACGCAGGTAAATTCTGGA
ACCGCTCGTGGGATGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_56430ATCC64974_56430Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56430-T1ATCC64974_56430-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56430-T1.cdsATCC64974_56430-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56430-T1.exon2ATCC64974_56430-T1.exon2Aspergillus niger N402exon
ATCC64974_56430-T1.exon1ATCC64974_56430-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4328006..4329588 -
Powered by Drupal