You are here

Home

ATCC64974_56590-T1, ATCC64974_56590-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56590-T1
Unique NameATCC64974_56590-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4376435..4378108-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56590-T1 ID=ATCC64974_56590-T1|Name=ATCC64974_56590-T1|organism=Aspergillus niger N402|type=mRNA|length=1674bp|location=Sequence derived from alignment at OGUI01000007.1:4376435..4378108- (Aspergillus niger N402)
ATGTTCGACCGAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAA
TGGACGTCAGAGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCA
TTACCCTCATTCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCAT
GGAAACATCCCCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACC
TACCCGAAAGATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCG
GCCCTATATCCTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGG
ACATTCAGAACAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCT
AGCTTCCATGGGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCT
CGGGCCGCCGTCCGGTGAGTGGCATCTGTGCATTCATATTGTTCCTCTTA
CCCCTAACAGCTAGTCCCTTAGATCCTCATTGCGAGTTCCATTCTCTTCT
TTCTTTTTACTGTGGCCACAGCGCTAGCCCCCAATCTTGAAGCCTACTTT
ATCTTCCGCATATGTGCCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGG
GAGTGCCACCGTGGGCGATATTTATGAGCCAATGTCTCGAGCTTTACCAC
TGGGATGGGTATTGTCAGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTT
CTAGGAGTATGTCTCATCCAAAACATACCATTCACCTGGCTGTTCTTAAC
TGACACTTTCATATATAGGGCATCATGGCTACCTTCCGCCCATGGAGATA
TATATTCTGGCTACTTGCTGCATTAAACGGCTTCGCAGCAGTCCTTTTTA
TGATATTCTTTCCGGAGACCATCAGCCACAAATCAAACGCCCATTTCAGA
GGGAAGAGCCTGCCTCAGCAGACCAAGCAGCTCTGGAACCACATCTCACC
CCTTCGCATTGCCCGCTTGGTCTTCTCTTACCCGAACATCTTTCTCACTA
GCCTCACTGCCGGCGCCTTAGTGTGGAATCAATACGCCCTTCTCACGCCT
ATTCGCTACGTTCTTAACCCTCGCTTTCACCTGGAAAGCCCCATTGAAGC
CGGCCTCTTCTACCTCGGCCCCGGTGGCGGCTACATAGCCGGCACCTTCT
TTGGTGGCCGTTGGGCCGATCTTGTGGCTCGGAAATACACTCGTATCCGC
AACGGACGACGTATACCTGAAGACCGTCTCCGCTCTTGTGTATCCTTCAT
CTTAATTGCTATCCCAGCATGCATCCTTGTTTATGGCTGGACAGTTGACA
AAGAAGTCGGGGGCATCCCAGTTCCCGTCGTCGCTATGTTTCTGCAAGGA
GTAGCCACAATGTTCTGCTTCCCCAGTCTGAACACTTACGGATTGGATGT
TATGCAAGAGAGTGGTAGAAGCGAGGAGGTCGTCGCGGCGAACTTTGTTT
GCCGGTATATGTTTGCTGCTCTCGGGACGGGTGTTGTCCTACCTGCACTT
AAGGCAATGGGCGTGGGGTGGTTCAGTACCATCTCGGCGCTGTTTCTGAT
AGCTGTCGGTGGTGGATTATATCTGACCGCGGAATATGGCCCTCGATGGA
GGGAGGCTGTTGATGCAAAGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGA
GAACACGCCCCAGAGCATGTTTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4376435..4378108-

>ATCC64974_56590-T1 ID=ATCC64974_56590-T1|Name=ATCC64974_56590-T1|organism=Aspergillus niger N402|type=CDS|length=4662bp|location=Sequence derived from alignment at OGUI01000007.1:4376435..4378108- (Aspergillus niger N402)
GGCATCATGGCTACCTTCCGCCCATGGAGATATATATTCTGGCTACTTGC
TGCATTAAACGGCTTCGCAGCAGTCCTTTTTATGATATTCTTTCCGGAGA
CCATCAGCCACAAATCAAACGCCCATTTCAGAGGGAAGAGCCTGCCTCAG
CAGACCAAGCAGCTCTGGAACCACATCTCACCCCTTCGCATTGCCCGCTT
GGTCTTCTCTTACCCGAACATCTTTCTCACTAGCCTCACTGCCGGCGCCT
TAGTGTGGAATCAATACGCCCTTCTCACGCCTATTCGCTACGTTCTTAAC
CCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCGGCCTCTTCTACCTCGG
CCCCGGTGGCGGCTACATAGCCGGCACCTTCTTTGGTGGCCGTTGGGCCG
ATCTTGTGGCTCGGAAATACACTCGTATCCGCAACGGACGACGTATACCT
GAAGACCGTCTCCGCTCTTGTGTATCCTTCATCTTAATTGCTATCCCAGC
ATGCATCCTTGTTTATGGCTGGACAGTTGACAAAGAAGTCGGGGGCATCC
CAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGTAGCCACAATGTTCTGC
TTCCCCAGTCTGAACACTTACGGATTGGATGTTATGCAAGAGAGTGGTAG
AAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGCCGGTATATGTTTGCTG
CTCTCGGGACGGGTGTTGTCCTACCTGCACTTAAGGCAATGGGCGTGGGG
TGGTTCAGTACCATCTCGGCGCTGTTTCTGATAGCTGTCGGTGGTGGATT
ATATCTGACCGCGGAATATGGCCCTCGATGGAGGGAGGCTGTTGATGCAA
AGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGAACACGCCCCAGAGCAT
GTTTAAATCCTCATTGCGAGTTCCATTCTCTTCTTTCTTTTTACTGTGGC
CACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTATCTTCCGCATATGTG
CCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGAGTGCCACCGTGGGC
GATATTTATGAGCCAATGTCTCGAGCTTTACCACTGGGATGGGTATTGTC
AGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCTAGGAATGTTCGACC
GAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATGGACGTCAG
AGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATTACCCTCAT
TCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGGAAACATCC
CCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTACCCGAAAG
ATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGCCCTATATC
CTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGACATTCAGAA
CAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAGCTTCCATG
GGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCGGGCCGCCG
TCCGGGCATCATGGCTACCTTCCGCCCATGGAGATATATATTCTGGCTAC
TTGCTGCATTAAACGGCTTCGCAGCAGTCCTTTTTATGATATTCTTTCCG
GAGACCATCAGCCACAAATCAAACGCCCATTTCAGAGGGAAGAGCCTGCC
TCAGCAGACCAAGCAGCTCTGGAACCACATCTCACCCCTTCGCATTGCCC
GCTTGGTCTTCTCTTACCCGAACATCTTTCTCACTAGCCTCACTGCCGGC
GCCTTAGTGTGGAATCAATACGCCCTTCTCACGCCTATTCGCTACGTTCT
TAACCCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCGGCCTCTTCTACC
TCGGCCCCGGTGGCGGCTACATAGCCGGCACCTTCTTTGGTGGCCGTTGG
GCCGATCTTGTGGCTCGGAAATACACTCGTATCCGCAACGGACGACGTAT
ACCTGAAGACCGTCTCCGCTCTTGTGTATCCTTCATCTTAATTGCTATCC
CAGCATGCATCCTTGTTTATGGCTGGACAGTTGACAAAGAAGTCGGGGGC
ATCCCAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGTAGCCACAATGTT
CTGCTTCCCCAGTCTGAACACTTACGGATTGGATGTTATGCAAGAGAGTG
GTAGAAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGCCGGTATATGTTT
GCTGCTCTCGGGACGGGTGTTGTCCTACCTGCACTTAAGGCAATGGGCGT
GGGGTGGTTCAGTACCATCTCGGCGCTGTTTCTGATAGCTGTCGGTGGTG
GATTATATCTGACCGCGGAATATGGCCCTCGATGGAGGGAGGCTGTTGAT
GCAAAGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGAACACGCCCCAGA
GCATGTTTAAATCCTCATTGCGAGTTCCATTCTCTTCTTTCTTTTTACTG
TGGCCACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTATCTTCCGCATA
TGTGCCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGAGTGCCACCGT
GGGCGATATTTATGAGCCAATGTCTCGAGCTTTACCACTGGGATGGGTAT
TGTCAGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCTAGGAATGTTC
GACCGAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATGGACG
TCAGAGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATTACCC
TCATTCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGGAAAC
ATCCCCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTACCCG
AAAGATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGCCCTA
TATCCTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGACATTC
AGAACAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAGCTTC
CATGGGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCGGGCC
GCCGTCCGGGCATCATGGCTACCTTCCGCCCATGGAGATATATATTCTGG
CTACTTGCTGCATTAAACGGCTTCGCAGCAGTCCTTTTTATGATATTCTT
TCCGGAGACCATCAGCCACAAATCAAACGCCCATTTCAGAGGGAAGAGCC
TGCCTCAGCAGACCAAGCAGCTCTGGAACCACATCTCACCCCTTCGCATT
GCCCGCTTGGTCTTCTCTTACCCGAACATCTTTCTCACTAGCCTCACTGC
CGGCGCCTTAGTGTGGAATCAATACGCCCTTCTCACGCCTATTCGCTACG
TTCTTAACCCTCGCTTTCACCTGGAAAGCCCCATTGAAGCCGGCCTCTTC
TACCTCGGCCCCGGTGGCGGCTACATAGCCGGCACCTTCTTTGGTGGCCG
TTGGGCCGATCTTGTGGCTCGGAAATACACTCGTATCCGCAACGGACGAC
GTATACCTGAAGACCGTCTCCGCTCTTGTGTATCCTTCATCTTAATTGCT
ATCCCAGCATGCATCCTTGTTTATGGCTGGACAGTTGACAAAGAAGTCGG
GGGCATCCCAGTTCCCGTCGTCGCTATGTTTCTGCAAGGAGTAGCCACAA
TGTTCTGCTTCCCCAGTCTGAACACTTACGGATTGGATGTTATGCAAGAG
AGTGGTAGAAGCGAGGAGGTCGTCGCGGCGAACTTTGTTTGCCGGTATAT
GTTTGCTGCTCTCGGGACGGGTGTTGTCCTACCTGCACTTAAGGCAATGG
GCGTGGGGTGGTTCAGTACCATCTCGGCGCTGTTTCTGATAGCTGTCGGT
GGTGGATTATATCTGACCGCGGAATATGGCCCTCGATGGAGGGAGGCTGT
TGATGCAAAGCTTCAGGCTAAAGGGGAAGAAAAGGGGAGAGAACACGCCC
CAGAGCATGTTTAAATCCTCATTGCGAGTTCCATTCTCTTCTTTCTTTTT
ACTGTGGCCACAGCGCTAGCCCCCAATCTTGAAGCCTACTTTATCTTCCG
CATATGTGCCGCGTTTCAGGGAACCGCATTTTTAGTGCTTGGGAGTGCCA
CCGTGGGCGATATTTATGAGCCAATGTCTCGAGCTTTACCACTGGGATGG
GTATTGTCAGGTAGTGTGACCGGGCCTGCCCTTGGTCCCGTTCTAGGAAT
GTTCGACCGAAAGTTCTTGAATTCGTCCTCGACACTCGTTGTCCCTAATG
GACGTCAGAGCTCCAGACATGAGCATCGACCGCCTCTCAACTCAACCATT
ACCCTCATTCAGGCCACCACTCATGACTCAGACCGTACTTTGCCTCATGG
AAACATCCCCGAAGAGGTCCATGAGGATCAGTACAACCAGTTCTCACCTA
CCCGAAAGATTATTGTCGTTATTATCCTTTCGTATTCTGCTATCCTCGGC
CCTATATCCTCCACTGCCATTCTGGCCTCTGTCCCAGAGATTGCCAGGAC
ATTCAGAACAGACGCAGATATTATCACTGCCAGCAACGCTCTTTACCTAG
CTTCCATGGGGATAGCTGCTCTCCTCTGGGGTCCTTTGAGTCAGATCTCG
GGCCGCCGTCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_56590ATCC64974_56590Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56590-T1ATCC64974_56590-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56590-T1.cdsATCC64974_56590-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56590-T1.exon3ATCC64974_56590-T1.exon3Aspergillus niger N402exon
ATCC64974_56590-T1.exon2ATCC64974_56590-T1.exon2Aspergillus niger N402exon
ATCC64974_56590-T1.exon1ATCC64974_56590-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4376435..4378108 -
Powered by Drupal