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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:4384824..4386046+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_56620-T1 ID=ATCC64974_56620-T1|Name=ATCC64974_56620-T1|organism=Aspergillus niger N402|type=mRNA|length=1223bp|location=Sequence derived from alignment at OGUI01000007.1:4384824..4386046+ (Aspergillus niger N402)
ATGCCGCGTAGAGCACATAAGAAGTCGCGCAATGGCTGCTTTGAATGTAA
GCGGCGCCACATTAAAGTAAGTTTGATGGGTTCGCCTGGCACACCTGTAG
CATCAGAATCTGACTTGTGCAGTGCGACGAGAAACAACCGATATGTTCCA
ACTGTCGGTCTTCGGAACGCTCCTGCGAATACGCGGATCCGTTCATACGG
GCGGCCAGTTCGCAGTCAAGCAAGTCATCGATCCCGTCACCTGCTGGCAC
GGTGACGGATGAACTACCCCTGCGTTCGCCTGCACATCCCTCTTCTCTTT
CTGAAAGTCCCCCAGTCAACATGCTTCACGCTGAGCTGTTCTTCAACTTG
ACAAATTACACCCTTTGCGGCCTCAGCGAAGGGGAGACTGGATGGATTGG
TACCCCGGACGTGATGCGAATTGTTGTCTCGACGCCCTATCTCATCAATC
AAGTCCTTGCACTAAGTGCTCTACACTTGAGTGTAGCGCGTCCAGGAAAT
AGAGAGTGGTATCGGCGCCATGCAGCCCATCTACAAACGCATGCATTGGA
GATTTACAATCAAAGGAGACTCGAATTTGACCAGGAGAGCAGTGTCCCAC
TATTTCTTTTCTCCTGCATCCTCGGCATGCATACTCTCTGTGACGTCTTG
GTTCACCGTGAAGACACCAGTTTCGATAGATTTCTGGAACGATTCGTGCA
TTGCCTGAAACTCCAACTTGGTATTCGCGTCGTGATTTCTTCGACCACGT
GGCAATCACTACAGGAGTCAATTCTCAAGAAACCGCTTCAAGACGGAGCA
ATCTTGTTCAATTGGGATACGAATCTGGGACCCGAGTGCGCAAGACTCTT
GCGGCTCATTGAAGGAGCTAAATTGGGCGATGCCATTACTTCCACCTATC
GCAGTGCGGTCCAGGCGCTGCAAAAGTCCATGAATGCAGCCATGAGAGGT
TCGCTGAAGAATATAAGCGGAGTTACGGGCTGGCCTGTCATAGTCAGCCC
AGAATATGCCGAACATTTGGCAATGCAACGGCCCGAAGCTCTGGTAATCC
TGGCTCATTACGCTGTGATTCTACACTGGCATCGGCACTTCTGGTTGTTT
GGCGATGGTGGCCGCTTCCTTATTGAGTCCATCAACAGGTATCTGGGCCC
GAGCTGGGCAGAGTGGTTAGAGTGGCCAAACCGGAGCTTGAGTGAACCTA
GTCAGTTAGGTGAAATATCGTAA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:4384824..4386046+ >ATCC64974_56620-T1 ID=ATCC64974_56620-T1|Name=ATCC64974_56620-T1|organism=Aspergillus niger N402|type=CDS|length=2334bp|location=Sequence derived from alignment at OGUI01000007.1:4384824..4386046+ (Aspergillus niger N402)
ATGCCGCGTAGAGCACATAAGAAGTCGCGCAATGGCTGCTTTGAATGTAA
GCGGCGCCACATTAAATGCGACGAGAAACAACCGATATGTTCCAACTGTC
GGTCTTCGGAACGCTCCTGCGAATACGCGGATCCGTTCATACGGGCGGCC
AGTTCGCAGTCAAGCAAGTCATCGATCCCGTCACCTGCTGGCACGGTGAC
GGATGAACTACCCCTGCGTTCGCCTGCACATCCCTCTTCTCTTTCTGAAA
GTCCCCCAGTCAACATGCTTCACGCTGAGCTGTTCTTCAACTTGACAAAT
TACACCCTTTGCGGCCTCAGCGAAGGGGAGACTGGATGGATTGGTACCCC
GGACGTGATGCGAATTGTTGTCTCGACGCCCTATCTCATCAATCAAGTCC
TTGCACTAAGTGCTCTACACTTGAGTGTAGCGCGTCCAGGAAATAGAGAG
TGGTATCGGCGCCATGCAGCCCATCTACAAACGCATGCATTGGAGATTTA
CAATCAAAGGAGACTCGAATTTGACCAGGAGAGCAGTGTCCCACTATTTC
TTTTCTCCTGCATCCTCGGCATGCATACTCTCTGTGACGTCTTGGTTCAC
CGTGAAGACACCAGTTTCGATAGATTTCTGGAACGATTCGTGCATTGCCT
GAAACTCCAACTTGGTATTCGCGTCGTGATTTCTTCGACCACGTGGCAAT
CACTACAGGAGTCAATTCTCAAGAAACCGCTTCAAGACGGAGCAATCTTG
TTCAATTGGGATACGAATCTGGGACCCGAGTGCGCAAGACTCTTGCGGCT
CATTGAAGGAGCTAAATTGGGCGATGCCATTACTTCCACCTATCGCAGTG
CGGTCCAGGCGCTGCAAAAGTCCATGAATGCAGCCATGAGAGGTTCGCTG
AAGAATATAAGCGGAGTTACGGGCTGGCCTGTCATAGTCAGCCCAGAATA
TGCCGAACATTTGGCAATGCAACGGCCCGAAGCTCTGGTAATCCTGGCTC
ATTACGCTGTGATTCTACACTGGCATCGGCACTTCTGGTTGTTTGGCGAT
GGTGGCCGCTTCCTTATTGAGTCCATCAACAGGTATCTGGGCCCGAGCTG
GGCAGAGTGGTTAGAGTGGCCAAACCGGAGCTTGAGTGAACCTAGTCAGT
TAGGTGAAATATCGTAAATGCCGCGTAGAGCACATAAGAAGTCGCGCAAT
GGCTGCTTTGAATGTAAGCGGCGCCACATTAAATGCGACGAGAAACAACC
GATATGTTCCAACTGTCGGTCTTCGGAACGCTCCTGCGAATACGCGGATC
CGTTCATACGGGCGGCCAGTTCGCAGTCAAGCAAGTCATCGATCCCGTCA
CCTGCTGGCACGGTGACGGATGAACTACCCCTGCGTTCGCCTGCACATCC
CTCTTCTCTTTCTGAAAGTCCCCCAGTCAACATGCTTCACGCTGAGCTGT
TCTTCAACTTGACAAATTACACCCTTTGCGGCCTCAGCGAAGGGGAGACT
GGATGGATTGGTACCCCGGACGTGATGCGAATTGTTGTCTCGACGCCCTA
TCTCATCAATCAAGTCCTTGCACTAAGTGCTCTACACTTGAGTGTAGCGC
GTCCAGGAAATAGAGAGTGGTATCGGCGCCATGCAGCCCATCTACAAACG
CATGCATTGGAGATTTACAATCAAAGGAGACTCGAATTTGACCAGGAGAG
CAGTGTCCCACTATTTCTTTTCTCCTGCATCCTCGGCATGCATACTCTCT
GTGACGTCTTGGTTCACCGTGAAGACACCAGTTTCGATAGATTTCTGGAA
CGATTCGTGCATTGCCTGAAACTCCAACTTGGTATTCGCGTCGTGATTTC
TTCGACCACGTGGCAATCACTACAGGAGTCAATTCTCAAGAAACCGCTTC
AAGACGGAGCAATCTTGTTCAATTGGGATACGAATCTGGGACCCGAGTGC
GCAAGACTCTTGCGGCTCATTGAAGGAGCTAAATTGGGCGATGCCATTAC
TTCCACCTATCGCAGTGCGGTCCAGGCGCTGCAAAAGTCCATGAATGCAG
CCATGAGAGGTTCGCTGAAGAATATAAGCGGAGTTACGGGCTGGCCTGTC
ATAGTCAGCCCAGAATATGCCGAACATTTGGCAATGCAACGGCCCGAAGC
TCTGGTAATCCTGGCTCATTACGCTGTGATTCTACACTGGCATCGGCACT
TCTGGTTGTTTGGCGATGGTGGCCGCTTCCTTATTGAGTCCATCAACAGG
TATCTGGGCCCGAGCTGGGCAGAGTGGTTAGAGTGGCCAAACCGGAGCTT
GAGTGAACCTAGTCAGTTAGGTGAAATATCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_56620-T1 | ATCC64974_56620-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:4384824..4386046 + |
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