You are here

Home

ATCC64974_56770-T1, ATCC64974_56770-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56770-T1
Unique NameATCC64974_56770-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4428093..4429007-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56770-T1 ID=ATCC64974_56770-T1|Name=ATCC64974_56770-T1|organism=Aspergillus niger N402|type=mRNA|length=915bp|location=Sequence derived from alignment at OGUI01000007.1:4428093..4429007- (Aspergillus niger N402)
ATGACATCTGAAAAGGTCCGTCCCCTGCCTCACCTGAACCCAGGTGAGGT
ATCGTTGTTGGATCTCGCGACCGACGACCCTCGCGATACCGTAACTTTGT
CCGACAAAGAGGCCTTGATCCTGCAGCTGTATCGGCAGATCCAGGAACAG
CGATTGGAGAAAGCGCTACTAGAACAAGGTCGGTGTCCATGTTGCTAGAG
CAACAAACTATCATTTGTACTTGATCTAGAACTAATCATTATGCCTTATA
CAGACACGGATTTGCTATCTGGAGACAATGCTGAAGAGCAACTAGCCGTC
GCCGAGCGTGAGCTTCTGGAAGCTAGGGCGACTTATACAGTCAGGAGGAA
AGCTGTTGGCACAGTTCTTATGACTGATCCCATCCTCAAGGCTGTTCATC
TGAAAGCGTCGACGCCAGCTGAACAGTAAGTTTACTAATCGTCTTCTGCA
TATAATTTTCTTGATTCTTGCGCCTTTTGCATTATTTGCTGGTTTTCCTA
TTTTTGGAGTGCTTCAATTATCTTCTCCTTACTTACCAGAAACAGGGCCC
TCCTACGGCTCATTAATCGTCGCGACATGCTATCTTTAGCGCATGAAAAT
CTGAATACTGCACACAATGCAACTCTTCGAAGGCTTTCAAGCCTGGAGGT
GGAAAATTCACAGATCCACCAGCAAAACCAAGAGTTAGTCCGTGAGCTGT
TAGCCCTTACGGTAGATGATGAATCATGGAGAGAGAATCTGGAAGATGCG
GAGCTCAAGGCCCAGCTAGATCAACTAGATGCGGATCGCAGGAAAAGCAA
AGCTAAATGGGAAACCATGAAAAACATCGCAAGCGGGATGGTTGTCGGTA
GTGGAGTGAACTGGGCTGAAGACGAGAGGCTCACGGCTCTGGTCCTTGAC
GAATCTGATGATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4428093..4429007-

>ATCC64974_56770-T1 ID=ATCC64974_56770-T1|Name=ATCC64974_56770-T1|organism=Aspergillus niger N402|type=CDS|length=2160bp|location=Sequence derived from alignment at OGUI01000007.1:4428093..4429007- (Aspergillus niger N402)
GGCCCTCCTACGGCTCATTAATCGTCGCGACATGCTATCTTTAGCGCATG
AAAATCTGAATACTGCACACAATGCAACTCTTCGAAGGCTTTCAAGCCTG
GAGGTGGAAAATTCACAGATCCACCAGCAAAACCAAGAGTTAGTCCGTGA
GCTGTTAGCCCTTACGGTAGATGATGAATCATGGAGAGAGAATCTGGAAG
ATGCGGAGCTCAAGGCCCAGCTAGATCAACTAGATGCGGATCGCAGGAAA
AGCAAAGCTAAATGGGAAACCATGAAAAACATCGCAAGCGGGATGGTTGT
CGGTAGTGGAGTGAACTGGGCTGAAGACGAGAGGCTCACGGCTCTGGTCC
TTGACGAATCTGATGATTGAACACGGATTTGCTATCTGGAGACAATGCTG
AAGAGCAACTAGCCGTCGCCGAGCGTGAGCTTCTGGAAGCTAGGGCGACT
TATACAGTCAGGAGGAAAGCTGTTGGCACAGTTCTTATGACTGATCCCAT
CCTCAAGGCTGTTCATCTGAAAGCGTCGACGCCAGCTGAACAATGACATC
TGAAAAGGTCCGTCCCCTGCCTCACCTGAACCCAGGTGAGGTATCGTTGT
TGGATCTCGCGACCGACGACCCTCGCGATACCGTAACTTTGTCCGACAAA
GAGGCCTTGATCCTGCAGCTGTATCGGCAGATCCAGGAACAGCGATTGGA
GAAAGCGCTACTAGAACAAGGGCCCTCCTACGGCTCATTAATCGTCGCGA
CATGCTATCTTTAGCGCATGAAAATCTGAATACTGCACACAATGCAACTC
TTCGAAGGCTTTCAAGCCTGGAGGTGGAAAATTCACAGATCCACCAGCAA
AACCAAGAGTTAGTCCGTGAGCTGTTAGCCCTTACGGTAGATGATGAATC
ATGGAGAGAGAATCTGGAAGATGCGGAGCTCAAGGCCCAGCTAGATCAAC
TAGATGCGGATCGCAGGAAAAGCAAAGCTAAATGGGAAACCATGAAAAAC
ATCGCAAGCGGGATGGTTGTCGGTAGTGGAGTGAACTGGGCTGAAGACGA
GAGGCTCACGGCTCTGGTCCTTGACGAATCTGATGATTGAACACGGATTT
GCTATCTGGAGACAATGCTGAAGAGCAACTAGCCGTCGCCGAGCGTGAGC
TTCTGGAAGCTAGGGCGACTTATACAGTCAGGAGGAAAGCTGTTGGCACA
GTTCTTATGACTGATCCCATCCTCAAGGCTGTTCATCTGAAAGCGTCGAC
GCCAGCTGAACAATGACATCTGAAAAGGTCCGTCCCCTGCCTCACCTGAA
CCCAGGTGAGGTATCGTTGTTGGATCTCGCGACCGACGACCCTCGCGATA
CCGTAACTTTGTCCGACAAAGAGGCCTTGATCCTGCAGCTGTATCGGCAG
ATCCAGGAACAGCGATTGGAGAAAGCGCTACTAGAACAAGGGCCCTCCTA
CGGCTCATTAATCGTCGCGACATGCTATCTTTAGCGCATGAAAATCTGAA
TACTGCACACAATGCAACTCTTCGAAGGCTTTCAAGCCTGGAGGTGGAAA
ATTCACAGATCCACCAGCAAAACCAAGAGTTAGTCCGTGAGCTGTTAGCC
CTTACGGTAGATGATGAATCATGGAGAGAGAATCTGGAAGATGCGGAGCT
CAAGGCCCAGCTAGATCAACTAGATGCGGATCGCAGGAAAAGCAAAGCTA
AATGGGAAACCATGAAAAACATCGCAAGCGGGATGGTTGTCGGTAGTGGA
GTGAACTGGGCTGAAGACGAGAGGCTCACGGCTCTGGTCCTTGACGAATC
TGATGATTGAACACGGATTTGCTATCTGGAGACAATGCTGAAGAGCAACT
AGCCGTCGCCGAGCGTGAGCTTCTGGAAGCTAGGGCGACTTATACAGTCA
GGAGGAAAGCTGTTGGCACAGTTCTTATGACTGATCCCATCCTCAAGGCT
GTTCATCTGAAAGCGTCGACGCCAGCTGAACAATGACATCTGAAAAGGTC
CGTCCCCTGCCTCACCTGAACCCAGGTGAGGTATCGTTGTTGGATCTCGC
GACCGACGACCCTCGCGATACCGTAACTTTGTCCGACAAAGAGGCCTTGA
TCCTGCAGCTGTATCGGCAGATCCAGGAACAGCGATTGGAGAAAGCGCTA
CTAGAACAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000776kinetochore
Vocabulary: Biological Process
TermDefinition
GO:0051382kinetochore assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_56770ATCC64974_56770Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56770-T1ATCC64974_56770-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56770-T1.cdsATCC64974_56770-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56770-T1.exon3ATCC64974_56770-T1.exon3Aspergillus niger N402exon
ATCC64974_56770-T1.exon2ATCC64974_56770-T1.exon2Aspergillus niger N402exon
ATCC64974_56770-T1.exon1ATCC64974_56770-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008426
DBxrefPFAM:PF05837
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4428093..4429007 -
Powered by Drupal