You are here

Home

ATCC64974_56780-T1, ATCC64974_56780-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56780-T1
Unique NameATCC64974_56780-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4429569..4433417+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56780-T1 ID=ATCC64974_56780-T1|Name=ATCC64974_56780-T1|organism=Aspergillus niger N402|type=mRNA|length=3849bp|location=Sequence derived from alignment at OGUI01000007.1:4429569..4433417+ (Aspergillus niger N402)
ATGACTGCTCGTGGGAAAAACGTTAAGACGCTTGCCACGGAGGTACGGTC
ACGCCGAACAATCAAACGAGGACTTTGTGCTAAAGCCATCAATAAACAGA
GCGAAATCTTTGTCTATGACCGAAGATGGGTCAGCGAGCCCAACAGCATC
CAGATTCCCGAGCTACCCCCGCCACATCCACTGCACGTCGATAACCCGCC
CGATACCCTCACAAACCAGAACGATCTACAAGCATGGAGGAGCCTCTACT
TAGCAAGGAGGACATGGGCCGCGGACCTCACGGAGCGCTGCGAGTCGGCG
GAAAAGCAGATACATGAGCACAACGAGCGCACTGATATCATCAACCGAGC
TGCAAGCGTAGCTCTCGAGAACCTCAAAACCCACGTCGGCACCCTAGAGC
ATAAATTCCAAGAGGCCCAGTCCTTCGCCAATGAACTTTTAAGTCAACAG
CAAGCAGCACTCAATGGATGGAAAAGGGCATTGTCAACTTTAGATAGCAT
TCCAGCTCGCAAGGACTTCCCCTTCCTGGGCCGTCCGTCAACACCAACGA
AAGGCAGAGGCCAAGCGATGGGTACACTACAAGACTACGTGGATACAGCG
GAGGTACAAAGGGCTGGCTCGGAAGCCCCAGAAATACTTGCGCGCTTTGC
CCATCAAGTTAGCACTATCGAGAAAAATGTTAGTGAGATTGCTACAGATA
CTCAACGCCTGGTTGATGAAGCCTTTCCTACGAGTGTTGAGCCCGTGGAT
GGACTCTTGCAGGAAATGGAAACAATATCAAATAAGATACAATCCGACTA
CGAGCATGTTCTGGCCTTGCCTAACAACCCAAAGACATTGGCAAACGTTT
CTAGGCTCGCTCTCAGCCATACAAAAGACCTTCTACCATCGTTATTGGAC
GTTAGCAACGAAATACAGGCTGGCCAGGAAGAAGCTGTGAGACGATATAA
TGCGGCAGTGAAAGCCTCGTCGAGTCATATGCGGCTCATATCTTCTATTG
AGTATCGGCTTGCCGAAACTCTACCTCAGATCAACAGCCTGCCTTTGCAA
AGCGAAGCATTTGATGTCATTTACACGGTCTTCCATATGCCTATTATCTA
CGGGTCGGTTCTGATTGAGTCTGTGCGACGTCGCGAGTTCAATGATAAAA
TGAAGAACGACTCACTGACTTTGGCGGAGGAAATGTCTGTATTCCGGGAA
GAAGAGCAGCGTCGAAGGAAGAAATGGCTCAAAAATATGGCTGATTTTAT
TTCCATCTCTGATGCTACGACCCCTGGCATCGAGATAAATCTACGGGGCC
AGGAGCAGGAATGGCCTGCCGTTAGTAGGAAAGAAGTTGAGTCATATATC
GAAGACCTGAAAAATAAACCTGACATGGAAAATCACGCCCAAGAACTGAT
GCAGCGCTTCAAAGAGCTTGATGCTCCTACCCGGATGCAGCGTCGCAGAG
CAAAAGCTTTCAAACAGGGAAGTCTTTTTGACCTGAGCCGAAGCTCGCTT
TTACTGCGCAGTGACGATATGGTCAGAAGTCTAAAAGATGAGAAAGTCAA
GCTTGAAGATAGATTGAAAGGCTCCGAGAGCCGTATTCGAAAGTTAGAGG
ATCTCCTTCATCGTCAGAGTCATATGAGCCGACCCTCCAGCGGCAACTTC
TCACTTGATTTCCCCAGTTCACCGGCGTCGCCTCACCCCGACTCACTTTC
AAGGAGATCTTCGGTCTCTTCAAGGCGAATGTCTGCAAATCAAGCTCCGG
AGGAAAAGGCGCTCGTACAACGTATCACTCGCCTCGAGGCCGAGCTAGCG
GCTGAGCGAGACACGGTGCAACGACTTCAAAAGGAGGCACATGCCGAGCG
GCAGTCTAATACCGACAAAATACAAGAAGCCCAGTCAACGAAGAAAGATC
TCATTGGCAATCTCGAAGCGCGGCAACGTGAGTTTGATGACGAGCGCAGA
TTTTTGGAGGGTGAATTAAGAAGGCTTCGAATCCGGACTGAGGAGCTAGA
AGAGGAGGTGGACAGAAATCTCGACAGTCGCGAACACGAGAAGCAAGACG
CCGATGAGCGCATACATCATCTCGAGATGGAATTGCAAGATGTCCATGCC
CGAGCTGAAGAAGAATTGAGGAAAGCAAATGAAACGATTGGACACTTGCA
ATCGGAGAAGGGCGTAGGAGAAACCCTACGGGCCCGTATTGAAGAGCTAC
AGAACCAGGTGGCTGAAAACGAAAGGAAAGAAAACGATAACAAGCACGCT
TTGCAGGTCGCTTTTCTCAATTTGTCTCCTGGTGGCTCTGTTCCTACCGA
ATTTCCGAATATCATTAAAGCAATTGAGGTTCTCTCCGAAGGGCTAACAA
TCCATGCCAAGAATGCGGAGGAGAGTGCCGCAAAAGCTTCAGCGGAAAGC
AAGGTGCTCGAAGAACGGTTGGGTCTGATGGAGTCTGAATTGGAGGATTT
GAGAAAGACTGCGACCTCACGAGAAACAGAACTTTCCCAAGCTCGAAATG
AATTGGCTGAAGGAAATGCAAAGCTGAGCATTGTGACCTCAGAATTGGAA
GATGAACGATCAAAACTCATCGCATTACAGTCCCAATTTGCTGCGGGCGA
GACAGGATCCGACGCCCTGCGGGAGCGTGTTACCGAAGAAGAACGGAAGT
TAACTGATCTGGCCCAGAGGCTAGCTGAGGTTGAGACATTGGCTCGTCAG
TCTGAAGAAGAAGTTACTACCTGGAAGAAGAAGGTTGAAGCAATGTCCGA
AGCGGAGCAGCAAGCTACTGTACGGTTCGAGACTTGCGGGGTCAGGTTCC
AGGAGTTGTCAAAGCAGCTTTTCGCACAAGTGGAGAAGCTGGAGCGCATG
CTGGAACAACTAGGGTTCACGATCGTTCGTCAAAATGGTGACATAGTTGT
GCAGAGGTCGTCCAAGGTCAATGCCCTCTCTAGCACCGGTGACAGTCTTA
GCCAGTCGGGAGTGGTGTCTGTGAGACCGGACGCAAGCCTTCTCGATTGG
ATGCATGCCGATAGCAAGGAAGAAGAAACAGATAAGTTCATGGCTTTCGT
GGAATCCTTATATCAATTTGATGTGGACATCTTCGGCGACGCGGTCGTCA
AGCGTGTAAAGGATATTGAAGTTCTTGCTCGCAAATGGCAGAAAGAAGCC
CGCGGATACCGAGACAAGTACCACCGGGTTCAAAGCGAAGCCCATGATAA
AATCGCCTACCGGTCCTTTAAAGAAGGGGATCTTGCACTCTTCTTGCCTA
CCCGCAACCAAGCTATCCGGTCATGGGCTGCGTTCAATGTTGGCGCACCA
CACTATTTCCTGCGCGAGCAAGATGCGCACAAGCTTCAAACCCGGGACTG
GCTGCTTGCTCGGATTACCAAGATCGAAGAACGCGTTGTTGATCTCTCCA
AATCGATGAACGGTGCCAATCCTGACCGCCGTTCCATCGGCGAAGTCAGC
GATGGCACCTCACTTGATGACGAAAACCCGTTTGAGCTGTCTGATGGTCT
CCGCTGGTACCTCTTAGATGCCACGGAAGAAAAGCCAGGCGCCCCAGCGA
CTCCGGGCTTAGGAAAGAGCACTGTTGCGCCAGCACACGTAGACGCCAAA
GGCAGCATTCGCATGAAACGCACATCAGCCGGTGGGAATATTGCCAAAAC
GTTGACCAAGAGCTTAGACAGCCGACGAAATAGTTCCAATTCTAAGAAGG
GGCATTCCTCGACTCCTTCACAACGCGGCAACGAATCAACAACAGACCTA
GCAAGACTAGCTGAACAAGACACTGCTGCCAGCTTACACTCACGGGAGGC
AGCCCCCAAACCCGATGAGGTTCGCCGCAACCCTCCTCAGGGTCCGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4429569..4433417+

>ATCC64974_56780-T1 ID=ATCC64974_56780-T1|Name=ATCC64974_56780-T1|organism=Aspergillus niger N402|type=CDS|length=3849bp|location=Sequence derived from alignment at OGUI01000007.1:4429569..4433417+ (Aspergillus niger N402)
ATGACTGCTCGTGGGAAAAACGTTAAGACGCTTGCCACGGAGGTACGGTC
ACGCCGAACAATCAAACGAGGACTTTGTGCTAAAGCCATCAATAAACAGA
GCGAAATCTTTGTCTATGACCGAAGATGGGTCAGCGAGCCCAACAGCATC
CAGATTCCCGAGCTACCCCCGCCACATCCACTGCACGTCGATAACCCGCC
CGATACCCTCACAAACCAGAACGATCTACAAGCATGGAGGAGCCTCTACT
TAGCAAGGAGGACATGGGCCGCGGACCTCACGGAGCGCTGCGAGTCGGCG
GAAAAGCAGATACATGAGCACAACGAGCGCACTGATATCATCAACCGAGC
TGCAAGCGTAGCTCTCGAGAACCTCAAAACCCACGTCGGCACCCTAGAGC
ATAAATTCCAAGAGGCCCAGTCCTTCGCCAATGAACTTTTAAGTCAACAG
CAAGCAGCACTCAATGGATGGAAAAGGGCATTGTCAACTTTAGATAGCAT
TCCAGCTCGCAAGGACTTCCCCTTCCTGGGCCGTCCGTCAACACCAACGA
AAGGCAGAGGCCAAGCGATGGGTACACTACAAGACTACGTGGATACAGCG
GAGGTACAAAGGGCTGGCTCGGAAGCCCCAGAAATACTTGCGCGCTTTGC
CCATCAAGTTAGCACTATCGAGAAAAATGTTAGTGAGATTGCTACAGATA
CTCAACGCCTGGTTGATGAAGCCTTTCCTACGAGTGTTGAGCCCGTGGAT
GGACTCTTGCAGGAAATGGAAACAATATCAAATAAGATACAATCCGACTA
CGAGCATGTTCTGGCCTTGCCTAACAACCCAAAGACATTGGCAAACGTTT
CTAGGCTCGCTCTCAGCCATACAAAAGACCTTCTACCATCGTTATTGGAC
GTTAGCAACGAAATACAGGCTGGCCAGGAAGAAGCTGTGAGACGATATAA
TGCGGCAGTGAAAGCCTCGTCGAGTCATATGCGGCTCATATCTTCTATTG
AGTATCGGCTTGCCGAAACTCTACCTCAGATCAACAGCCTGCCTTTGCAA
AGCGAAGCATTTGATGTCATTTACACGGTCTTCCATATGCCTATTATCTA
CGGGTCGGTTCTGATTGAGTCTGTGCGACGTCGCGAGTTCAATGATAAAA
TGAAGAACGACTCACTGACTTTGGCGGAGGAAATGTCTGTATTCCGGGAA
GAAGAGCAGCGTCGAAGGAAGAAATGGCTCAAAAATATGGCTGATTTTAT
TTCCATCTCTGATGCTACGACCCCTGGCATCGAGATAAATCTACGGGGCC
AGGAGCAGGAATGGCCTGCCGTTAGTAGGAAAGAAGTTGAGTCATATATC
GAAGACCTGAAAAATAAACCTGACATGGAAAATCACGCCCAAGAACTGAT
GCAGCGCTTCAAAGAGCTTGATGCTCCTACCCGGATGCAGCGTCGCAGAG
CAAAAGCTTTCAAACAGGGAAGTCTTTTTGACCTGAGCCGAAGCTCGCTT
TTACTGCGCAGTGACGATATGGTCAGAAGTCTAAAAGATGAGAAAGTCAA
GCTTGAAGATAGATTGAAAGGCTCCGAGAGCCGTATTCGAAAGTTAGAGG
ATCTCCTTCATCGTCAGAGTCATATGAGCCGACCCTCCAGCGGCAACTTC
TCACTTGATTTCCCCAGTTCACCGGCGTCGCCTCACCCCGACTCACTTTC
AAGGAGATCTTCGGTCTCTTCAAGGCGAATGTCTGCAAATCAAGCTCCGG
AGGAAAAGGCGCTCGTACAACGTATCACTCGCCTCGAGGCCGAGCTAGCG
GCTGAGCGAGACACGGTGCAACGACTTCAAAAGGAGGCACATGCCGAGCG
GCAGTCTAATACCGACAAAATACAAGAAGCCCAGTCAACGAAGAAAGATC
TCATTGGCAATCTCGAAGCGCGGCAACGTGAGTTTGATGACGAGCGCAGA
TTTTTGGAGGGTGAATTAAGAAGGCTTCGAATCCGGACTGAGGAGCTAGA
AGAGGAGGTGGACAGAAATCTCGACAGTCGCGAACACGAGAAGCAAGACG
CCGATGAGCGCATACATCATCTCGAGATGGAATTGCAAGATGTCCATGCC
CGAGCTGAAGAAGAATTGAGGAAAGCAAATGAAACGATTGGACACTTGCA
ATCGGAGAAGGGCGTAGGAGAAACCCTACGGGCCCGTATTGAAGAGCTAC
AGAACCAGGTGGCTGAAAACGAAAGGAAAGAAAACGATAACAAGCACGCT
TTGCAGGTCGCTTTTCTCAATTTGTCTCCTGGTGGCTCTGTTCCTACCGA
ATTTCCGAATATCATTAAAGCAATTGAGGTTCTCTCCGAAGGGCTAACAA
TCCATGCCAAGAATGCGGAGGAGAGTGCCGCAAAAGCTTCAGCGGAAAGC
AAGGTGCTCGAAGAACGGTTGGGTCTGATGGAGTCTGAATTGGAGGATTT
GAGAAAGACTGCGACCTCACGAGAAACAGAACTTTCCCAAGCTCGAAATG
AATTGGCTGAAGGAAATGCAAAGCTGAGCATTGTGACCTCAGAATTGGAA
GATGAACGATCAAAACTCATCGCATTACAGTCCCAATTTGCTGCGGGCGA
GACAGGATCCGACGCCCTGCGGGAGCGTGTTACCGAAGAAGAACGGAAGT
TAACTGATCTGGCCCAGAGGCTAGCTGAGGTTGAGACATTGGCTCGTCAG
TCTGAAGAAGAAGTTACTACCTGGAAGAAGAAGGTTGAAGCAATGTCCGA
AGCGGAGCAGCAAGCTACTGTACGGTTCGAGACTTGCGGGGTCAGGTTCC
AGGAGTTGTCAAAGCAGCTTTTCGCACAAGTGGAGAAGCTGGAGCGCATG
CTGGAACAACTAGGGTTCACGATCGTTCGTCAAAATGGTGACATAGTTGT
GCAGAGGTCGTCCAAGGTCAATGCCCTCTCTAGCACCGGTGACAGTCTTA
GCCAGTCGGGAGTGGTGTCTGTGAGACCGGACGCAAGCCTTCTCGATTGG
ATGCATGCCGATAGCAAGGAAGAAGAAACAGATAAGTTCATGGCTTTCGT
GGAATCCTTATATCAATTTGATGTGGACATCTTCGGCGACGCGGTCGTCA
AGCGTGTAAAGGATATTGAAGTTCTTGCTCGCAAATGGCAGAAAGAAGCC
CGCGGATACCGAGACAAGTACCACCGGGTTCAAAGCGAAGCCCATGATAA
AATCGCCTACCGGTCCTTTAAAGAAGGGGATCTTGCACTCTTCTTGCCTA
CCCGCAACCAAGCTATCCGGTCATGGGCTGCGTTCAATGTTGGCGCACCA
CACTATTTCCTGCGCGAGCAAGATGCGCACAAGCTTCAAACCCGGGACTG
GCTGCTTGCTCGGATTACCAAGATCGAAGAACGCGTTGTTGATCTCTCCA
AATCGATGAACGGTGCCAATCCTGACCGCCGTTCCATCGGCGAAGTCAGC
GATGGCACCTCACTTGATGACGAAAACCCGTTTGAGCTGTCTGATGGTCT
CCGCTGGTACCTCTTAGATGCCACGGAAGAAAAGCCAGGCGCCCCAGCGA
CTCCGGGCTTAGGAAAGAGCACTGTTGCGCCAGCACACGTAGACGCCAAA
GGCAGCATTCGCATGAAACGCACATCAGCCGGTGGGAATATTGCCAAAAC
GTTGACCAAGAGCTTAGACAGCCGACGAAATAGTTCCAATTCTAAGAAGG
GGCATTCCTCGACTCCTTCACAACGCGGCAACGAATCAACAACAGACCTA
GCAAGACTAGCTGAACAAGACACTGCTGCCAGCTTACACTCACGGGAGGC
AGCCCCCAAACCCGATGAGGTTCGCCGCAACCCTCCTCAGGGTCCGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG11ATCC64974_56780Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56780-T1.exon1ATCC64974_56780-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56780-T1.cdsATCC64974_56780-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56780-T1ATCC64974_56780-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019460
DBxrefPFAM:PF10377
Product peripheral membrane protein
Product coiled-coil
Productoligomeric
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4429569..4433417 +
Powered by Drupal