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ATCC64974_56980-T1, ATCC64974_56980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56980-T1
Unique NameATCC64974_56980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4488285..4489770+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56980-T1 ID=ATCC64974_56980-T1|Name=ATCC64974_56980-T1|organism=Aspergillus niger N402|type=mRNA|length=1486bp|location=Sequence derived from alignment at OGUI01000007.1:4488285..4489770+ (Aspergillus niger N402)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGTATG
TCAATCAACACGAAGAACATTCATTCACGCATTATCTTGCTAACCGATCA
CACCAGGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGA
AGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGAC
TACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCA
GCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGA
GGTTCGTCCAATACCCTATCCTATCAATCCATCTCCATCCTTTGTTACTA
ACGCCAAAATGATCCAGTGCTGCCGTTGCGAAATAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4488285..4489770+

>ATCC64974_56980-T1 ID=ATCC64974_56980-T1|Name=ATCC64974_56980-T1|organism=Aspergillus niger N402|type=CDS|length=4077bp|location=Sequence derived from alignment at OGUI01000007.1:4488285..4489770+ (Aspergillus niger N402)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGGACC
TGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAGTGGATCGTC
AACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTACAAGGAGGG
CACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGCAGGTCATTG
AGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGTGCTGCCGTT
GCGAAATAAATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAG
CGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGT
ATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTC
CCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGAT
CCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGG
CCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTC
GTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCA
GAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACC
TGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGT
GTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTA
CAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTG
TCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTC
GCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCA
GAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTC
AGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTC
AACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGC
CTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCG
CCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTC
TACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTA
CGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACT
TCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTG
CGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGC
CCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACA
TCAAGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAG
TGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTA
CAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGC
AGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGT
GCTGCCGTTGCGAAATAAATGGCAGCCAACGTTCCTCCTTCCGCTGAGAC
CCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCG
CCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCAT
CTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAA
GGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCG
ACTATGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCC
GACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTA
CCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCG
TCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAG
GAGCACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCG
CTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACC
AGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGG
GGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGA
GGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACC
CTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTC
CCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTT
CTCCCCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGC
GCTACCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAAC
AGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCA
GGAGGGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGT
ACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAG
GATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGT
TGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGC
GGATCGACATCAAGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAG
GGTGAGAAGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAA
GATTGACTACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGG
TGTACCAGCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAA
GTTCTGAGTGCTGCCGTTGCGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
INT6ATCC64974_56980Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56980-T1.exon1ATCC64974_56980-T1.exon1Aspergillus niger N402exon
ATCC64974_56980-T1.exon2ATCC64974_56980-T1.exon2Aspergillus niger N402exon
ATCC64974_56980-T1.exon3ATCC64974_56980-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56980-T1.cdsATCC64974_56980-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56980-T1ATCC64974_56980-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016650
DBxrefInterPro:IPR019010
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
DBxrefPFAM:PF09440
Producteukaryotic translation initiation factor 3 subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4488285..4489770 +
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