You are here

Home

ATCC64974_56990-T1, ATCC64974_56990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56990-T1
Unique NameATCC64974_56990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4493773..4494928-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56990-T1 ID=ATCC64974_56990-T1|Name=ATCC64974_56990-T1|organism=Aspergillus niger N402|type=mRNA|length=1156bp|location=Sequence derived from alignment at OGUI01000007.1:4493773..4494928- (Aspergillus niger N402)
ATGTCATCCGCCGTTGTGCACAGCGACGACCTCATGGAGCCCACGCTCCA
GTCGGTGGTGAACCAAAAGACCTTGCGTTGGATCTTTGTTGGCGGCAAAG
GAGGTGTCGGCAAGACTACGACTTCCTGCTCTCTTGCAATTCAGCTTGCC
AAAGTTCGCAAATCCGTCCTTCTCATCTCCACCGATCCCGCACACAACCT
TAGCGATGCTTTCGGTCAGAAGTTTGGAAAGGAGGCCCGACTGGTCGATG
GATACACGAACCTGAGCGCTATGGAGATCGACCCTAACGGAAGTATTCAA
GATCTCCTGGCTAGTGGTGAAGGCCAAGGCGACGACCCTCTGTCTGGTAT
GGGCGTTGGTGGAATGATGCAGGACCTTGCGTTCAGTGTACGTCACGCAC
CGGAGCTGACCAGCAGAAAATCATTGCTCTCGTGGAAAATAGCTAATTGT
AGCAGATCCCCGGTGTTGATGAAGCTATGTCCTTTGCCGAAGTCCTGAAG
CAGGTCAAGTCGCTGTCCTACGAAGTTATTGTGTTTGACACTGCGCCGAC
CGGTCACACTCTCCGCTTCCTCCAATTCCCCACTGTCTTAGAGAAGGCTC
TCGCCAAGCTGTCGCAGCTGTCGTCTCAGTTCGGTCCCATGCTGAACTCG
ATCCTTGGTTCCCGTGGTGGTCTGCCTGGCGGTCAAAACATTGATGAATT
GTTGCAGAAGATGGAGTCGCTGAGGGAGACAATCAGCGAGGTTAACTCGC
AGTTCAAGGACGCCGATCTGACTACCTTCGTCTGTGTCTGCATTGCGGAA
TTCCTGTCCCTCTACGAAACCGAGCGCATGATCCAGGAGCTCACAAGCTA
TAACATCGATACCCATGCCATTGTGGTCAACCAGCTCCTGTTCCCCAAGC
AAAGCAGCGAGTGCGAGCAATGTAATGCACGGAGGAAGATGCAGAAGAAG
TACTTGGAGCAGATTGAAGAGTTATATGAAGACTTCAACGTGGTTAGAAT
GCCATTGCTGGTTGAGGAAGTTAGAGGCAAGGAGAAGCTTGAGAAGTAAG
TCGACGCCTAGATAACCAGTTGTGAGAGAAGCATCACGTTGGCTAACCTG
CCCACAGATTCAGCGACATGCTTGTGAACCCGTATGTTCCCCCGGAGGGC
AACTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4493773..4494928-

>ATCC64974_56990-T1 ID=ATCC64974_56990-T1|Name=ATCC64974_56990-T1|organism=Aspergillus niger N402|type=CDS|length=3078bp|location=Sequence derived from alignment at OGUI01000007.1:4493773..4494928- (Aspergillus niger N402)
ATTCAGCGACATGCTTGTGAACCCGTATGTTCCCCCGGAGGGCAACTGAA
TCCCCGGTGTTGATGAAGCTATGTCCTTTGCCGAAGTCCTGAAGCAGGTC
AAGTCGCTGTCCTACGAAGTTATTGTGTTTGACACTGCGCCGACCGGTCA
CACTCTCCGCTTCCTCCAATTCCCCACTGTCTTAGAGAAGGCTCTCGCCA
AGCTGTCGCAGCTGTCGTCTCAGTTCGGTCCCATGCTGAACTCGATCCTT
GGTTCCCGTGGTGGTCTGCCTGGCGGTCAAAACATTGATGAATTGTTGCA
GAAGATGGAGTCGCTGAGGGAGACAATCAGCGAGGTTAACTCGCAGTTCA
AGGACGCCGATCTGACTACCTTCGTCTGTGTCTGCATTGCGGAATTCCTG
TCCCTCTACGAAACCGAGCGCATGATCCAGGAGCTCACAAGCTATAACAT
CGATACCCATGCCATTGTGGTCAACCAGCTCCTGTTCCCCAAGCAAAGCA
GCGAGTGCGAGCAATGTAATGCACGGAGGAAGATGCAGAAGAAGTACTTG
GAGCAGATTGAAGAGTTATATGAAGACTTCAACGTGGTTAGAATGCCATT
GCTGGTTGAGGAAGTTAGAGGCAAGGAGAAGCTTGAGAAATGTCATCCGC
CGTTGTGCACAGCGACGACCTCATGGAGCCCACGCTCCAGTCGGTGGTGA
ACCAAAAGACCTTGCGTTGGATCTTTGTTGGCGGCAAAGGAGGTGTCGGC
AAGACTACGACTTCCTGCTCTCTTGCAATTCAGCTTGCCAAAGTTCGCAA
ATCCGTCCTTCTCATCTCCACCGATCCCGCACACAACCTTAGCGATGCTT
TCGGTCAGAAGTTTGGAAAGGAGGCCCGACTGGTCGATGGATACACGAAC
CTGAGCGCTATGGAGATCGACCCTAACGGAAGTATTCAAGATCTCCTGGC
TAGTGGTGAAGGCCAAGGCGACGACCCTCTGTCTGGTATGGGCGTTGGTG
GAATGATGCAGGACCTTGCGTTCAGTATTCAGCGACATGCTTGTGAACCC
GTATGTTCCCCCGGAGGGCAACTGAATCCCCGGTGTTGATGAAGCTATGT
CCTTTGCCGAAGTCCTGAAGCAGGTCAAGTCGCTGTCCTACGAAGTTATT
GTGTTTGACACTGCGCCGACCGGTCACACTCTCCGCTTCCTCCAATTCCC
CACTGTCTTAGAGAAGGCTCTCGCCAAGCTGTCGCAGCTGTCGTCTCAGT
TCGGTCCCATGCTGAACTCGATCCTTGGTTCCCGTGGTGGTCTGCCTGGC
GGTCAAAACATTGATGAATTGTTGCAGAAGATGGAGTCGCTGAGGGAGAC
AATCAGCGAGGTTAACTCGCAGTTCAAGGACGCCGATCTGACTACCTTCG
TCTGTGTCTGCATTGCGGAATTCCTGTCCCTCTACGAAACCGAGCGCATG
ATCCAGGAGCTCACAAGCTATAACATCGATACCCATGCCATTGTGGTCAA
CCAGCTCCTGTTCCCCAAGCAAAGCAGCGAGTGCGAGCAATGTAATGCAC
GGAGGAAGATGCAGAAGAAGTACTTGGAGCAGATTGAAGAGTTATATGAA
GACTTCAACGTGGTTAGAATGCCATTGCTGGTTGAGGAAGTTAGAGGCAA
GGAGAAGCTTGAGAAATGTCATCCGCCGTTGTGCACAGCGACGACCTCAT
GGAGCCCACGCTCCAGTCGGTGGTGAACCAAAAGACCTTGCGTTGGATCT
TTGTTGGCGGCAAAGGAGGTGTCGGCAAGACTACGACTTCCTGCTCTCTT
GCAATTCAGCTTGCCAAAGTTCGCAAATCCGTCCTTCTCATCTCCACCGA
TCCCGCACACAACCTTAGCGATGCTTTCGGTCAGAAGTTTGGAAAGGAGG
CCCGACTGGTCGATGGATACACGAACCTGAGCGCTATGGAGATCGACCCT
AACGGAAGTATTCAAGATCTCCTGGCTAGTGGTGAAGGCCAAGGCGACGA
CCCTCTGTCTGGTATGGGCGTTGGTGGAATGATGCAGGACCTTGCGTTCA
GTATTCAGCGACATGCTTGTGAACCCGTATGTTCCCCCGGAGGGCAACTG
AATCCCCGGTGTTGATGAAGCTATGTCCTTTGCCGAAGTCCTGAAGCAGG
TCAAGTCGCTGTCCTACGAAGTTATTGTGTTTGACACTGCGCCGACCGGT
CACACTCTCCGCTTCCTCCAATTCCCCACTGTCTTAGAGAAGGCTCTCGC
CAAGCTGTCGCAGCTGTCGTCTCAGTTCGGTCCCATGCTGAACTCGATCC
TTGGTTCCCGTGGTGGTCTGCCTGGCGGTCAAAACATTGATGAATTGTTG
CAGAAGATGGAGTCGCTGAGGGAGACAATCAGCGAGGTTAACTCGCAGTT
CAAGGACGCCGATCTGACTACCTTCGTCTGTGTCTGCATTGCGGAATTCC
TGTCCCTCTACGAAACCGAGCGCATGATCCAGGAGCTCACAAGCTATAAC
ATCGATACCCATGCCATTGTGGTCAACCAGCTCCTGTTCCCCAAGCAAAG
CAGCGAGTGCGAGCAATGTAATGCACGGAGGAAGATGCAGAAGAAGTACT
TGGAGCAGATTGAAGAGTTATATGAAGACTTCAACGTGGTTAGAATGCCA
TTGCTGGTTGAGGAAGTTAGAGGCAAGGAGAAGCTTGAGAAATGTCATCC
GCCGTTGTGCACAGCGACGACCTCATGGAGCCCACGCTCCAGTCGGTGGT
GAACCAAAAGACCTTGCGTTGGATCTTTGTTGGCGGCAAAGGAGGTGTCG
GCAAGACTACGACTTCCTGCTCTCTTGCAATTCAGCTTGCCAAAGTTCGC
AAATCCGTCCTTCTCATCTCCACCGATCCCGCACACAACCTTAGCGATGC
TTTCGGTCAGAAGTTTGGAAAGGAGGCCCGACTGGTCGATGGATACACGA
ACCTGAGCGCTATGGAGATCGACCCTAACGGAAGTATTCAAGATCTCCTG
GCTAGTGGTGAAGGCCAAGGCGACGACCCTCTGTCTGGTATGGGCGTTGG
TGGAATGATGCAGGACCTTGCGTTCAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GET3ATCC64974_56990Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56990-T1ATCC64974_56990-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56990-T1.cdsATCC64974_56990-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56990-T1.exon3ATCC64974_56990-T1.exon3Aspergillus niger N402exon
ATCC64974_56990-T1.exon2ATCC64974_56990-T1.exon2Aspergillus niger N402exon
ATCC64974_56990-T1.exon1ATCC64974_56990-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092631UM
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR027542
DBxrefInterPro:IPR016300
DBxrefInterPro:IPR025723
DBxrefPFAM:PF01656
DBxrefPFAM:PF02374
DBxrefPFAM:PF13614
ProductGolgi to ER traffic- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4493773..4494928 -
Powered by Drupal