You are here

Home

ATCC64974_570-T1, ATCC64974_570-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_570-T1
Unique NameATCC64974_570-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:210519..213827+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_570-T1 ID=ATCC64974_570-T1|Name=ATCC64974_570-T1|organism=Aspergillus niger N402|type=mRNA|length=3309bp|location=Sequence derived from alignment at OGUI01000001.1:210519..213827+ (Aspergillus niger N402)
ATGGACCCCTCCAAGCGCCATGAGCCCACTTCATCCACTGCGGCTTCATC
CCCCCCAGCAACCGGCCCCCCGCTGTCTACAGACGACGCGACTTCGTCGA
CTCACAGACTGAGCCATCCCTCTCTCCACGCGATGTCTCTACCTCCTTCT
TCCCCAGGACTCTCGTCGGCCGCCCTGTTATCGCCCTCCGATCCCCCCGC
GCGTGCTGTCGCGACCCAGGCGCATCCCACCCCACGTCGCATCCCCAGCT
CCAGCTCCCTGGCCGAGGAGCGTCGCAAGTCCTCTCCCAGCTTGAAGAAA
CGCTCATCCACCGCGTCGCTACGTTCCAATCGTGGAGCCTCCACCTCTCC
CCGCCCCAGCTTATCGCGACACTCCTCGTCCTCGTTTGGCACCTCTCCGA
CGAGCGCGTCCGCCACTCACCCAAACATGGCCAAGAAGGCTCACCGAACA
GTCTCAGCAGAGCACCCTGTCACTACAGCAGCATCTATCGCAGCAGAGTC
CTTTCGCAAAGAAGTAGATTGGCATCAGTCCGCAAAGCTACAGTCGCAGA
CACTGGTGCTCGTCCATGATGCGTGCTATGGCCATCGCTTCTCGCGCCCG
CGAACCTCCCGCGCGGCGCTTAACTCTATCGTCGAGCGTCCGGAGCGCAT
CCAGGCCAGCGTGCTGGGCATTTCGGCCGCCTATGTTCGACTAGCCCGGC
GACATGCAGGAGGCGCGTTCGCTCCTCATCCCGATCTCAATCCGCAGCAG
CTGCCCGTGCCGCCGTTCCACATTCGCAAGACAGCGCGCACACTGTCGCT
CAGCTCGCCCGCCGTCACGCACGTGCATGGGTCCAAATGGATGGAGGACC
TGAAGACCATGTGCGATGCAGCCGAATCCCGGCTTGCGTTGAACGGCAAG
GAGTTGGTCCGCCCTCGCAGCGCCGGCAAGGACAGCGCCGCCACCAATGC
CCCTGCTTTTCACGAAGGAGACCTGTACTTGTGCTCGGAATCCTTGAGCG
CGTTCGAAGGCGCCCTGGGTGGTGTCAGTGAAGGCGTGGATGCAGTCATG
GGTCCGGCCCCAACCAAGCGAGCGTTTGTCTGCATCCGCCCGCCCGGTCA
TCATTGTTCGGCGGGTCATCCGTCAGGCTTCTGTTGGATCAACAACGTCC
ATGTGGGCATCTCGTATGCGGCCATGACCCATGGCTTGACCCATGCCGCC
ATTCTCGACTTTGATCTGCATCACGGAGACGGATCGCAAGATATCGCCTG
GCAACAGAATCACAGAGCCGTTACTGCGCCACGGAATGCGGCTGCCCATC
GAAAGACCATGGTGGGATATTTTAGTCTGCACGATATCAACTCCTATCCG
TGTGAAATGGGCGAGCCAGAAAAGGTGCGTAATGCGAGTGTGTGTATCGA
CAAGGCCCACGGCCAGTCCATCTGGAACGTGCATCTGGAGCCGTGGAAGT
CGAATAAAGAGTTTTGGGACCTGTATGCCGCCAAGTACACTGTGCTGATC
GACAAGGCGCGTGCTTTCCTGCGCATGCATACCGAACGTCTGGCTAACAC
GCCCAATGGACCTCCGCCTAAGGCAGCCATTTTTATCTCAGCTGGGTTTG
ATGCGAGCGAGTGGGAGGGCGCCGGCATGCAGCGACACCAGGTCAACGTG
CCCACCGAGTTTTATGCCAGGTTCACGGCCGACGTGGTGCGGATGGCCAA
CGAGGAGGGCCTGGGGACGGATGGACGGATCATCAGTGTTCTTGAGGGCG
GCTACAGCAATCGTGCATTGACAAGCGGTGTGCTCAGTCATTTGTCTGGG
CTGGGGGATGCAAAGGGCAGCACCCATGATGTGGACGAGCAGCAGATCAA
CCGTCTTGCCTCTGAAATGACAGATCGTCTGGGCCTGTCTAATTCAGCAG
AGGGGCGATCAGTGACTGAACCGGTCTACAACAGTGAGTGGTGGTCACCA
GGCGTGCTGGAGGAATTGGAGGCACTAGTTTATTCGCCGGCAGCACCTGT
CAAGCCCCGGGAGAAGGCTGCACCGACCTACTTGACCACAACGCAGTCAT
TTTCTGCCAAAGTGGTCAATCCCCCGCGAGACCGCAGGTCGACCGGTTCG
CACTCTAGCCCGGAGCCCGAAGCACCGTCTCCACCCCCGCCAGTCAGCTG
GGCCACTGCCACGCACGAGCTATGCAAGGTTCTAATTCCGACCGGTCGGC
AAACGACAAGCTGTCAGCCAGAGGAACTCAACGCAGAGGCATCGCGCCTG
CGACGGGAGCGTCAGACAGCGGTGGATGCAGCCTCCACGAGCGCGACCAC
GGCTGCGGTTGCAGCTGCAGCTGCAGCTGCGGCTACGGCTACGGCTACGG
CGGCCGAGGACAGCCGGATGAAGCTCCGCGTGCGAAAGCCCAAGCCCTCG
CTGCCTCTGTCGCCTTCAGCCGAGACAGTCAAGCGTCCTGCGGCTCGTGG
AAGTCGGAGAACCACCATCGACACAGCTCCAGACACAGCCCCGGCTGTAC
AGACACCCGCTCGCGTGACCCGCAGGAAGAGCGCAGGGGCTGGCTCAGCA
GCATCGACCCCAGAGCCGACCGGGCCCAGACCCGCGACGAGTGCCACGGT
GCGCAAAACCAATACTTCACAATCCAGCACCCCTCGATTACCCTCGAGCC
CAAATACGCCTCCTGTGCCGCGGGTGCCGCCTGCTTTTCTTTCTGCAGAA
AGCGAAGAGTCGCCGAATCCCGATGGGCCGCAAGATGATCTGGACAGTCT
GACAGCCGGAGTACGCAAGCTGCACATCAAACTAAAGGTCCCGTCGCCGG
AAGAGAACGCGGCTAGGGAGAGAGAAAGAGAGAGACGGATAGCGGAAGAG
CGGAAGCGCACAGCGTCCAAGGCTACTTCGAAGACACAGACGCAGACGCA
GACCCCCAAGTCACCTCGCAAGCCCGCTGGCCGGGCACAGACGAGCTCGG
CTTCAAAGACGGCATCTCGATCTGCAGCGAAGCCTGCGCCAGTGGCCATT
CATCCAGGAACAGAAGCCAAGGACGAGCCATCGATCGTTACGCCAGTGAC
CTCGTCACCGCCGTCCGTGGGCAAAATTGAAAGCAACACCACCAACGGCT
GGGACAGAGGCGAATCCGAGGCTGCAGCTGGAATGGTCATGTCGCCGCCG
CTGACACCAGGCCGTCCACCATCGGCATTGTATTCTCCTCCAGGGATGAC
ATTGGCGCGGGACGGATTGCCGGTGATGATGTCGAGCGGGGTGATTCCAT
TTGCAGATACCGTACGGGGAATGCAGGAGGAGGAGGAGCAGAAAGGAGGT
AATAATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:210519..213827+

>ATCC64974_570-T1 ID=ATCC64974_570-T1|Name=ATCC64974_570-T1|organism=Aspergillus niger N402|type=CDS|length=3309bp|location=Sequence derived from alignment at OGUI01000001.1:210519..213827+ (Aspergillus niger N402)
ATGGACCCCTCCAAGCGCCATGAGCCCACTTCATCCACTGCGGCTTCATC
CCCCCCAGCAACCGGCCCCCCGCTGTCTACAGACGACGCGACTTCGTCGA
CTCACAGACTGAGCCATCCCTCTCTCCACGCGATGTCTCTACCTCCTTCT
TCCCCAGGACTCTCGTCGGCCGCCCTGTTATCGCCCTCCGATCCCCCCGC
GCGTGCTGTCGCGACCCAGGCGCATCCCACCCCACGTCGCATCCCCAGCT
CCAGCTCCCTGGCCGAGGAGCGTCGCAAGTCCTCTCCCAGCTTGAAGAAA
CGCTCATCCACCGCGTCGCTACGTTCCAATCGTGGAGCCTCCACCTCTCC
CCGCCCCAGCTTATCGCGACACTCCTCGTCCTCGTTTGGCACCTCTCCGA
CGAGCGCGTCCGCCACTCACCCAAACATGGCCAAGAAGGCTCACCGAACA
GTCTCAGCAGAGCACCCTGTCACTACAGCAGCATCTATCGCAGCAGAGTC
CTTTCGCAAAGAAGTAGATTGGCATCAGTCCGCAAAGCTACAGTCGCAGA
CACTGGTGCTCGTCCATGATGCGTGCTATGGCCATCGCTTCTCGCGCCCG
CGAACCTCCCGCGCGGCGCTTAACTCTATCGTCGAGCGTCCGGAGCGCAT
CCAGGCCAGCGTGCTGGGCATTTCGGCCGCCTATGTTCGACTAGCCCGGC
GACATGCAGGAGGCGCGTTCGCTCCTCATCCCGATCTCAATCCGCAGCAG
CTGCCCGTGCCGCCGTTCCACATTCGCAAGACAGCGCGCACACTGTCGCT
CAGCTCGCCCGCCGTCACGCACGTGCATGGGTCCAAATGGATGGAGGACC
TGAAGACCATGTGCGATGCAGCCGAATCCCGGCTTGCGTTGAACGGCAAG
GAGTTGGTCCGCCCTCGCAGCGCCGGCAAGGACAGCGCCGCCACCAATGC
CCCTGCTTTTCACGAAGGAGACCTGTACTTGTGCTCGGAATCCTTGAGCG
CGTTCGAAGGCGCCCTGGGTGGTGTCAGTGAAGGCGTGGATGCAGTCATG
GGTCCGGCCCCAACCAAGCGAGCGTTTGTCTGCATCCGCCCGCCCGGTCA
TCATTGTTCGGCGGGTCATCCGTCAGGCTTCTGTTGGATCAACAACGTCC
ATGTGGGCATCTCGTATGCGGCCATGACCCATGGCTTGACCCATGCCGCC
ATTCTCGACTTTGATCTGCATCACGGAGACGGATCGCAAGATATCGCCTG
GCAACAGAATCACAGAGCCGTTACTGCGCCACGGAATGCGGCTGCCCATC
GAAAGACCATGGTGGGATATTTTAGTCTGCACGATATCAACTCCTATCCG
TGTGAAATGGGCGAGCCAGAAAAGGTGCGTAATGCGAGTGTGTGTATCGA
CAAGGCCCACGGCCAGTCCATCTGGAACGTGCATCTGGAGCCGTGGAAGT
CGAATAAAGAGTTTTGGGACCTGTATGCCGCCAAGTACACTGTGCTGATC
GACAAGGCGCGTGCTTTCCTGCGCATGCATACCGAACGTCTGGCTAACAC
GCCCAATGGACCTCCGCCTAAGGCAGCCATTTTTATCTCAGCTGGGTTTG
ATGCGAGCGAGTGGGAGGGCGCCGGCATGCAGCGACACCAGGTCAACGTG
CCCACCGAGTTTTATGCCAGGTTCACGGCCGACGTGGTGCGGATGGCCAA
CGAGGAGGGCCTGGGGACGGATGGACGGATCATCAGTGTTCTTGAGGGCG
GCTACAGCAATCGTGCATTGACAAGCGGTGTGCTCAGTCATTTGTCTGGG
CTGGGGGATGCAAAGGGCAGCACCCATGATGTGGACGAGCAGCAGATCAA
CCGTCTTGCCTCTGAAATGACAGATCGTCTGGGCCTGTCTAATTCAGCAG
AGGGGCGATCAGTGACTGAACCGGTCTACAACAGTGAGTGGTGGTCACCA
GGCGTGCTGGAGGAATTGGAGGCACTAGTTTATTCGCCGGCAGCACCTGT
CAAGCCCCGGGAGAAGGCTGCACCGACCTACTTGACCACAACGCAGTCAT
TTTCTGCCAAAGTGGTCAATCCCCCGCGAGACCGCAGGTCGACCGGTTCG
CACTCTAGCCCGGAGCCCGAAGCACCGTCTCCACCCCCGCCAGTCAGCTG
GGCCACTGCCACGCACGAGCTATGCAAGGTTCTAATTCCGACCGGTCGGC
AAACGACAAGCTGTCAGCCAGAGGAACTCAACGCAGAGGCATCGCGCCTG
CGACGGGAGCGTCAGACAGCGGTGGATGCAGCCTCCACGAGCGCGACCAC
GGCTGCGGTTGCAGCTGCAGCTGCAGCTGCGGCTACGGCTACGGCTACGG
CGGCCGAGGACAGCCGGATGAAGCTCCGCGTGCGAAAGCCCAAGCCCTCG
CTGCCTCTGTCGCCTTCAGCCGAGACAGTCAAGCGTCCTGCGGCTCGTGG
AAGTCGGAGAACCACCATCGACACAGCTCCAGACACAGCCCCGGCTGTAC
AGACACCCGCTCGCGTGACCCGCAGGAAGAGCGCAGGGGCTGGCTCAGCA
GCATCGACCCCAGAGCCGACCGGGCCCAGACCCGCGACGAGTGCCACGGT
GCGCAAAACCAATACTTCACAATCCAGCACCCCTCGATTACCCTCGAGCC
CAAATACGCCTCCTGTGCCGCGGGTGCCGCCTGCTTTTCTTTCTGCAGAA
AGCGAAGAGTCGCCGAATCCCGATGGGCCGCAAGATGATCTGGACAGTCT
GACAGCCGGAGTACGCAAGCTGCACATCAAACTAAAGGTCCCGTCGCCGG
AAGAGAACGCGGCTAGGGAGAGAGAAAGAGAGAGACGGATAGCGGAAGAG
CGGAAGCGCACAGCGTCCAAGGCTACTTCGAAGACACAGACGCAGACGCA
GACCCCCAAGTCACCTCGCAAGCCCGCTGGCCGGGCACAGACGAGCTCGG
CTTCAAAGACGGCATCTCGATCTGCAGCGAAGCCTGCGCCAGTGGCCATT
CATCCAGGAACAGAAGCCAAGGACGAGCCATCGATCGTTACGCCAGTGAC
CTCGTCACCGCCGTCCGTGGGCAAAATTGAAAGCAACACCACCAACGGCT
GGGACAGAGGCGAATCCGAGGCTGCAGCTGGAATGGTCATGTCGCCGCCG
CTGACACCAGGCCGTCCACCATCGGCATTGTATTCTCCTCCAGGGATGAC
ATTGGCGCGGGACGGATTGCCGGTGATGATGTCGAGCGGGGTGATTCCAT
TTGCAGATACCGTACGGGGAATGCAGGAGGAGGAGGAGCAGAAAGGAGGT
AATAATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_570ATCC64974_570Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_570-T1.exon1ATCC64974_570-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_570-T1.cdsATCC64974_570-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_570-T1ATCC64974_570-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023696
DBxrefInterPro:IPR023801
DBxrefInterPro:IPR037138
DBxrefInterPro:IPR000286
DBxrefPFAM:PF00850
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:210519..213827 +
Powered by Drupal