You are here

Home

ATCC64974_57080-T1, ATCC64974_57080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57080-T1
Unique NameATCC64974_57080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4520165..4522535+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57080-T1 ID=ATCC64974_57080-T1|Name=ATCC64974_57080-T1|organism=Aspergillus niger N402|type=mRNA|length=2371bp|location=Sequence derived from alignment at OGUI01000007.1:4520165..4522535+ (Aspergillus niger N402)
ATGCTGTCCACGGCGCACAGCAACCTTCATGAGCGACATCGACAACACAG
GCGGCAGATCTCGACGCCGTCCGCTCTTGATGCCGTGAAAGCCCCCAGCC
TTCCGGCGCAAGCGATGCATCGTTATCATGCCCATCGTCGAGGACAGAGC
TTTGACAACAGAGCTTTGCGCGTCCAGCGATCGCAATCCATGCAAGATGG
TACAAATCATACTACTAACTCTACAGTACCGCAGCAGCACCATTCGAATA
TGCTCGGGGACAGCCAACACCAACGATACCTGTGTGTAGCGCAGCCGTCG
TTTCCCCAGCAATCAGCCCCCATGCCCATGATCCCCGACTGTTTCACCCC
GGAAGAGGTGCAAAACCTTCAAAGTCACAATGGCCAGGACAGTCAACCAA
GCATGGCCTACCTGAATGCGCCCTTCGCAAAGGACGTTCCGCACATGAAC
ATGCAGTTCGATCTGATGCAACAACAACAGATGCACAGCGCTAAGGTCCC
GTGCGGGTCTGGAACGGAAGGTCAATTTTTCGAGACGGGACTTTGGGACT
TTTACCAGCCAACTTTTCCCCCTCACGCTGATGTAAGGAAGTTATCGGTG
CAGTCGGATGCTACTCCGTCTCAGCACCCGCATACGCCTAAGCCCGGCAA
TACACGTACGTTTATGGCTCTGTCGGCTCTTTTCTATGCACAACTTGCTA
ATCTGTTGTGTAGACTATGCCCCGATTACACCAGCAACAACACCATTCAA
GCAAACCGTGGGCCTAGCTCAGTACGGTGGGGACATCCAGTCAGGATCCA
CCAAAGACCAGGGTAGCGCGATGCCCGGATCAGCCCAGTCGTCGTACATG
CAGCGAGCAAAGTCTCTCCAAGGCGTGGCTGGAACCACTTTCACGCAGCA
GAAGTTTGATGTCTCTACCCCCCCGAACACAGCATCATTTGAAGTGGATA
ACTTTGATACTTTTAACTATGAGCAGGGTTCTAGCTTTGAGGTTCCTAAA
TCGGAAAGTCTGTCACAAAGCCAGTATGCATCGTCGTCGTCGGCATCATC
ATCCTTCATGTCATCTCCCGAGCTTGCGGCTATGCCTTGCCCCGAAGATG
GAGGTGCAAAGACCCCCAAAATCCCTATCTATCCCGCCACTCCCAGCCGT
CCGCATCACAGGAAAACGCCCAGTGCAACACCTAGCTCATCGGCCAAGCC
AAAGCTTTCTCCGCGCGTCGCGTCTATCGATAACCTGAACCTCGACGCTC
GCGTGCAAGCATCAATCAAAGAAACGGGTGTCACCATTGACGAGATTGCG
TCGTACATTCATGGGCCGGACCCGGAGGACGGGAAATGGGTATGCCTGCA
CCCCGGCTGCGAGCGCCGCTTTGGAAGAAAAGAGAATATCAAGTCACATG
TCCAGACTCACCTGGGCGACCGCCAGTACAAGTGCGATCATTGCAATAAG
TGCTTTGTTCGCGGCCATGACCTTAAGCGTCATGCTAAGATCCATACCGG
CGACAAGCCTTACGAGTGCCTCTGTGGAAATGTATTTGCGAGACACGACG
CCTTGACTCGACACAGACAGCGGGGTATGTGCATTGGCGGCTACAAGGGA
ATTGTGCGCAAGACAACGAAACGGGGTCGTCCGAAGAAGCACCGACCAGA
GATGGATGAGAGACAAGACAAAGCATCGAGAACGCGTCAGAGGATTGCAG
AGAAGTCATCTTTCGACTCGTCCACATCCGAGTCCTCACGCAACACGCCT
CCTTCCGAAGTTTTCGAAAACATGAGCCTGCATGGTTCTAGCCCGGCGGA
AGAGATGCCAGTGTTCAACAACCCCAACTACTCGTTGCCACCAGAGGTTT
TCACATTCACGCCTCCTGCATCTCCCGGTTACAGCGTGGGAATCAAGCCA
TCGCCTTCTCGGGACGAGCGATCGATCACCCCCAGCTCAGAAGATGAAAT
GCTTCCTTCCTCGCCATCAAAGCAGCCCCTCGAGAGCCTCGTCACGGACT
CCAGCTTGCCTTACATGTCTGATCCGGAGACATGCCCGTACACAGATGCT
TCCGGCGCTGCTAGCCATTCTCTATCTTCACCCCATGCCGCTCCCACCCT
GTCAGAATCGTCTAACGGCTCGGATCTCGACATTTTTATTAGCCAGGATT
CGACCTCTGGTTTTGGAAAGCCCGAGTTTGGAGACCTGGCTGATCCCGAC
ATGGCCCCGTTCCCAGACTATGTGAACACGACGTCCTTTGAAGGTGGTCT
GGAACTGTTCCCCAACAAGCCCTTCTCCTCGGGCCCCGTCATGGCCGACG
ACTTCTTCTTCCAATTTCAAGTGGACGAACAAGCCTCGGATGTTATGACC
AAAGAATTCTTCATGGACTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4520165..4522535+

>ATCC64974_57080-T1 ID=ATCC64974_57080-T1|Name=ATCC64974_57080-T1|organism=Aspergillus niger N402|type=CDS|length=4626bp|location=Sequence derived from alignment at OGUI01000007.1:4520165..4522535+ (Aspergillus niger N402)
ATGCTGTCCACGGCGCACAGCAACCTTCATGAGCGACATCGACAACACAG
GCGGCAGATCTCGACGCCGTCCGCTCTTGATGCCGTGAAAGCCCCCAGCC
TTCCGGCGCAAGCGATGCATCGTTATCATGCCCATCGTCGAGGACAGAGC
TTTGACAACAGAGCTTTGCGCGTCCAGCGATCGCAATCCATGCAAGATGG
TACAAATCATACTACTAACTCTACAGTACCGCAGCAGCACCATTCGAATA
TGCTCGGGGACAGCCAACACCAACGATACCTGTGTGTAGCGCAGCCGTCG
TTTCCCCAGCAATCAGCCCCCATGCCCATGATCCCCGACTGTTTCACCCC
GGAAGAGGTGCAAAACCTTCAAAGTCACAATGGCCAGGACAGTCAACCAA
GCATGGCCTACCTGAATGCGCCCTTCGCAAAGGACGTTCCGCACATGAAC
ATGCAGTTCGATCTGATGCAACAACAACAGATGCACAGCGCTAAGGTCCC
GTGCGGGTCTGGAACGGAAGGTCAATTTTTCGAGACGGGACTTTGGGACT
TTTACCAGCCAACTTTTCCCCCTCACGCTGATGTAAGGAAGTTATCGGTG
CAGTCGGATGCTACTCCGTCTCAGCACCCGCATACGCCTAAGCCCGGCAA
TACACACTATGCCCCGATTACACCAGCAACAACACCATTCAAGCAAACCG
TGGGCCTAGCTCAGTACGGTGGGGACATCCAGTCAGGATCCACCAAAGAC
CAGGGTAGCGCGATGCCCGGATCAGCCCAGTCGTCGTACATGCAGCGAGC
AAAGTCTCTCCAAGGCGTGGCTGGAACCACTTTCACGCAGCAGAAGTTTG
ATGTCTCTACCCCCCCGAACACAGCATCATTTGAAGTGGATAACTTTGAT
ACTTTTAACTATGAGCAGGGTTCTAGCTTTGAGGTTCCTAAATCGGAAAG
TCTGTCACAAAGCCAGTATGCATCGTCGTCGTCGGCATCATCATCCTTCA
TGTCATCTCCCGAGCTTGCGGCTATGCCTTGCCCCGAAGATGGAGGTGCA
AAGACCCCCAAAATCCCTATCTATCCCGCCACTCCCAGCCGTCCGCATCA
CAGGAAAACGCCCAGTGCAACACCTAGCTCATCGGCCAAGCCAAAGCTTT
CTCCGCGCGTCGCGTCTATCGATAACCTGAACCTCGACGCTCGCGTGCAA
GCATCAATCAAAGAAACGGGTGTCACCATTGACGAGATTGCGTCGTACAT
TCATGGGCCGGACCCGGAGGACGGGAAATGGGTATGCCTGCACCCCGGCT
GCGAGCGCCGCTTTGGAAGAAAAGAGAATATCAAGTCACATGTCCAGACT
CACCTGGGCGACCGCCAGTACAAGTGCGATCATTGCAATAAGTGCTTTGT
TCGCGGCCATGACCTTAAGCGTCATGCTAAGATCCATACCGGCGACAAGC
CTTACGAGTGCCTCTGTGGAAATGTATTTGCGAGACACGACGCCTTGACT
CGACACAGACAGCGGGGTATGTGCATTGGCGGCTACAAGGGAATTGTGCG
CAAGACAACGAAACGGGGTCGTCCGAAGAAGCACCGACCAGAGATGGATG
AGAGACAAGACAAAGCATCGAGAACGCGTCAGAGGATTGCAGAGAAGTCA
TCTTTCGACTCGTCCACATCCGAGTCCTCACGCAACACGCCTCCTTCCGA
AGTTTTCGAAAACATGAGCCTGCATGGTTCTAGCCCGGCGGAAGAGATGC
CAGTGTTCAACAACCCCAACTACTCGTTGCCACCAGAGGTTTTCACATTC
ACGCCTCCTGCATCTCCCGGTTACAGCGTGGGAATCAAGCCATCGCCTTC
TCGGGACGAGCGATCGATCACCCCCAGCTCAGAAGATGAAATGCTTCCTT
CCTCGCCATCAAAGCAGCCCCTCGAGAGCCTCGTCACGGACTCCAGCTTG
CCTTACATGTCTGATCCGGAGACATGCCCGTACACAGATGCTTCCGGCGC
TGCTAGCCATTCTCTATCTTCACCCCATGCCGCTCCCACCCTGTCAGAAT
CGTCTAACGGCTCGGATCTCGACATTTTTATTAGCCAGGATTCGACCTCT
GGTTTTGGAAAGCCCGAGTTTGGAGACCTGGCTGATCCCGACATGGCCCC
GTTCCCAGACTATGTGAACACGACGTCCTTTGAAGGTGGTCTGGAACTGT
TCCCCAACAAGCCCTTCTCCTCGGGCCCCGTCATGGCCGACGACTTCTTC
TTCCAATTTCAAGTGGACGAACAAGCCTCGGATGTTATGACCAAAGAATT
CTTCATGGACTAAATGCTGTCCACGGCGCACAGCAACCTTCATGAGCGAC
ATCGACAACACAGGCGGCAGATCTCGACGCCGTCCGCTCTTGATGCCGTG
AAAGCCCCCAGCCTTCCGGCGCAAGCGATGCATCGTTATCATGCCCATCG
TCGAGGACAGAGCTTTGACAACAGAGCTTTGCGCGTCCAGCGATCGCAAT
CCATGCAAGATGGTACAAATCATACTACTAACTCTACAGTACCGCAGCAG
CACCATTCGAATATGCTCGGGGACAGCCAACACCAACGATACCTGTGTGT
AGCGCAGCCGTCGTTTCCCCAGCAATCAGCCCCCATGCCCATGATCCCCG
ACTGTTTCACCCCGGAAGAGGTGCAAAACCTTCAAAGTCACAATGGCCAG
GACAGTCAACCAAGCATGGCCTACCTGAATGCGCCCTTCGCAAAGGACGT
TCCGCACATGAACATGCAGTTCGATCTGATGCAACAACAACAGATGCACA
GCGCTAAGGTCCCGTGCGGGTCTGGAACGGAAGGTCAATTTTTCGAGACG
GGACTTTGGGACTTTTACCAGCCAACTTTTCCCCCTCACGCTGATGTAAG
GAAGTTATCGGTGCAGTCGGATGCTACTCCGTCTCAGCACCCGCATACGC
CTAAGCCCGGCAATACACACTATGCCCCGATTACACCAGCAACAACACCA
TTCAAGCAAACCGTGGGCCTAGCTCAGTACGGTGGGGACATCCAGTCAGG
ATCCACCAAAGACCAGGGTAGCGCGATGCCCGGATCAGCCCAGTCGTCGT
ACATGCAGCGAGCAAAGTCTCTCCAAGGCGTGGCTGGAACCACTTTCACG
CAGCAGAAGTTTGATGTCTCTACCCCCCCGAACACAGCATCATTTGAAGT
GGATAACTTTGATACTTTTAACTATGAGCAGGGTTCTAGCTTTGAGGTTC
CTAAATCGGAAAGTCTGTCACAAAGCCAGTATGCATCGTCGTCGTCGGCA
TCATCATCCTTCATGTCATCTCCCGAGCTTGCGGCTATGCCTTGCCCCGA
AGATGGAGGTGCAAAGACCCCCAAAATCCCTATCTATCCCGCCACTCCCA
GCCGTCCGCATCACAGGAAAACGCCCAGTGCAACACCTAGCTCATCGGCC
AAGCCAAAGCTTTCTCCGCGCGTCGCGTCTATCGATAACCTGAACCTCGA
CGCTCGCGTGCAAGCATCAATCAAAGAAACGGGTGTCACCATTGACGAGA
TTGCGTCGTACATTCATGGGCCGGACCCGGAGGACGGGAAATGGGTATGC
CTGCACCCCGGCTGCGAGCGCCGCTTTGGAAGAAAAGAGAATATCAAGTC
ACATGTCCAGACTCACCTGGGCGACCGCCAGTACAAGTGCGATCATTGCA
ATAAGTGCTTTGTTCGCGGCCATGACCTTAAGCGTCATGCTAAGATCCAT
ACCGGCGACAAGCCTTACGAGTGCCTCTGTGGAAATGTATTTGCGAGACA
CGACGCCTTGACTCGACACAGACAGCGGGGTATGTGCATTGGCGGCTACA
AGGGAATTGTGCGCAAGACAACGAAACGGGGTCGTCCGAAGAAGCACCGA
CCAGAGATGGATGAGAGACAAGACAAAGCATCGAGAACGCGTCAGAGGAT
TGCAGAGAAGTCATCTTTCGACTCGTCCACATCCGAGTCCTCACGCAACA
CGCCTCCTTCCGAAGTTTTCGAAAACATGAGCCTGCATGGTTCTAGCCCG
GCGGAAGAGATGCCAGTGTTCAACAACCCCAACTACTCGTTGCCACCAGA
GGTTTTCACATTCACGCCTCCTGCATCTCCCGGTTACAGCGTGGGAATCA
AGCCATCGCCTTCTCGGGACGAGCGATCGATCACCCCCAGCTCAGAAGAT
GAAATGCTTCCTTCCTCGCCATCAAAGCAGCCCCTCGAGAGCCTCGTCAC
GGACTCCAGCTTGCCTTACATGTCTGATCCGGAGACATGCCCGTACACAG
ATGCTTCCGGCGCTGCTAGCCATTCTCTATCTTCACCCCATGCCGCTCCC
ACCCTGTCAGAATCGTCTAACGGCTCGGATCTCGACATTTTTATTAGCCA
GGATTCGACCTCTGGTTTTGGAAAGCCCGAGTTTGGAGACCTGGCTGATC
CCGACATGGCCCCGTTCCCAGACTATGTGAACACGACGTCCTTTGAAGGT
GGTCTGGAACTGTTCCCCAACAAGCCCTTCTCCTCGGGCCCCGTCATGGC
CGACGACTTCTTCTTCCAATTTCAAGTGGACGAACAAGCCTCGGATGTTA
TGACCAAAGAATTCTTCATGGACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57080ATCC64974_57080Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57080-T1.exon1ATCC64974_57080-T1.exon1Aspergillus niger N402exon
ATCC64974_57080-T1.exon2ATCC64974_57080-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57080-T1.cdsATCC64974_57080-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57080-T1ATCC64974_57080-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4520165..4522535 +
Powered by Drupal