You are here

Home

ATCC64974_57120-T1, ATCC64974_57120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57120-T1
Unique NameATCC64974_57120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4532306..4533131-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57120-T1 ID=ATCC64974_57120-T1|Name=ATCC64974_57120-T1|organism=Aspergillus niger N402|type=mRNA|length=826bp|location=Sequence derived from alignment at OGUI01000007.1:4532306..4533131- (Aspergillus niger N402)
ATGAAGATCTTCATTCTTCTCGCCATCTGGCTGCTCGCCAGCTTGGGCTA
CGCAACTAGTAGGTACTACACTCCAACTGTCTTCTTCATCTGCTAACGCT
CTTAGGTTTCGTTGGCAATATGGCTGAAGTGTACCATGAGATTACTGATG
TCCTTCGTGGCCGTAAGTGTTACGAAGATGGTAGCTGAGGGTCCAATATA
CTGACTAGGCTTGGACAATAATATAGCCCACCATGCGGCTCACTTTGCCA
AACTGAACGGCGGTAAGCCTAAGCCCGATAAGCCTAAGGGTGTTGGGAAG
ACCCTGGATGATGGTAAGCTTGGAAGGACTCCTAATAAGAAACTTGAGTA
CTGATTCAGCTCTAGTTGTCACCTTGACTGTCTGTAAGACAGACGTGTCC
CTCGCCCCCACCGTTGGAACTTTTTCGTTGCCAACCATCGTGACCGCTGC
GACTTTGGCTCCAACTGTTGTCGTGACCGGTGTTGTGCCCACTGAGATTT
CTATTGGACTGCCCACTGAGTTTGCTCCTGAAATTCAAACTGGAGTCCTT
ACTGGTGAATCTCATTCCACTGATACGACTGTTGTGCCAACCAACTCTGT
GGTCTCAGGACTGTCCTCCTTCCTGACTGGAAGTCAAACTGTCTCTGAGA
TAACTGGCTCCACTGAAAACCACACTATCACCACCGAAATCAATGCATCG
GCTGTCACCAGCACCTTTGCCCATACCACGTTCCCTACCGCAAATGCTGG
GAACGACCATGAGGGCATGGCTTCGTCCGCAGTTGCGTTGTTGGTTGCTT
TGATCTTTAGTCTCGTGCGTATCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4532306..4533131-

>ATCC64974_57120-T1 ID=ATCC64974_57120-T1|Name=ATCC64974_57120-T1|organism=Aspergillus niger N402|type=CDS|length=2652bp|location=Sequence derived from alignment at OGUI01000007.1:4532306..4533131- (Aspergillus niger N402)
TTGTCACCTTGACTGTCTGTAAGACAGACGTGTCCCTCGCCCCCACCGTT
GGAACTTTTTCGTTGCCAACCATCGTGACCGCTGCGACTTTGGCTCCAAC
TGTTGTCGTGACCGGTGTTGTGCCCACTGAGATTTCTATTGGACTGCCCA
CTGAGTTTGCTCCTGAAATTCAAACTGGAGTCCTTACTGGTGAATCTCAT
TCCACTGATACGACTGTTGTGCCAACCAACTCTGTGGTCTCAGGACTGTC
CTCCTTCCTGACTGGAAGTCAAACTGTCTCTGAGATAACTGGCTCCACTG
AAAACCACACTATCACCACCGAAATCAATGCATCGGCTGTCACCAGCACC
TTTGCCCATACCACGTTCCCTACCGCAAATGCTGGGAACGACCATGAGGG
CATGGCTTCGTCCGCAGTTGCGTTGTTGGTTGCTTTGATCTTTAGTCTCG
TGCGTATCTGACCCACCATGCGGCTCACTTTGCCAAACTGAACGGCGGTA
AGCCTAAGCCCGATAAGCCTAAGGGTGTTGGGAAGACCCTGGATGATGGT
TTCGTTGGCAATATGGCTGAAGTGTACCATGAGATTACTGATGTCCTTCG
TGGCCATGAAGATCTTCATTCTTCTCGCCATCTGGCTGCTCGCCAGCTTG
GGCTACGCAACTATTGTCACCTTGACTGTCTGTAAGACAGACGTGTCCCT
CGCCCCCACCGTTGGAACTTTTTCGTTGCCAACCATCGTGACCGCTGCGA
CTTTGGCTCCAACTGTTGTCGTGACCGGTGTTGTGCCCACTGAGATTTCT
ATTGGACTGCCCACTGAGTTTGCTCCTGAAATTCAAACTGGAGTCCTTAC
TGGTGAATCTCATTCCACTGATACGACTGTTGTGCCAACCAACTCTGTGG
TCTCAGGACTGTCCTCCTTCCTGACTGGAAGTCAAACTGTCTCTGAGATA
ACTGGCTCCACTGAAAACCACACTATCACCACCGAAATCAATGCATCGGC
TGTCACCAGCACCTTTGCCCATACCACGTTCCCTACCGCAAATGCTGGGA
ACGACCATGAGGGCATGGCTTCGTCCGCAGTTGCGTTGTTGGTTGCTTTG
ATCTTTAGTCTCGTGCGTATCTGACCCACCATGCGGCTCACTTTGCCAAA
CTGAACGGCGGTAAGCCTAAGCCCGATAAGCCTAAGGGTGTTGGGAAGAC
CCTGGATGATGGTTTCGTTGGCAATATGGCTGAAGTGTACCATGAGATTA
CTGATGTCCTTCGTGGCCATGAAGATCTTCATTCTTCTCGCCATCTGGCT
GCTCGCCAGCTTGGGCTACGCAACTATTGTCACCTTGACTGTCTGTAAGA
CAGACGTGTCCCTCGCCCCCACCGTTGGAACTTTTTCGTTGCCAACCATC
GTGACCGCTGCGACTTTGGCTCCAACTGTTGTCGTGACCGGTGTTGTGCC
CACTGAGATTTCTATTGGACTGCCCACTGAGTTTGCTCCTGAAATTCAAA
CTGGAGTCCTTACTGGTGAATCTCATTCCACTGATACGACTGTTGTGCCA
ACCAACTCTGTGGTCTCAGGACTGTCCTCCTTCCTGACTGGAAGTCAAAC
TGTCTCTGAGATAACTGGCTCCACTGAAAACCACACTATCACCACCGAAA
TCAATGCATCGGCTGTCACCAGCACCTTTGCCCATACCACGTTCCCTACC
GCAAATGCTGGGAACGACCATGAGGGCATGGCTTCGTCCGCAGTTGCGTT
GTTGGTTGCTTTGATCTTTAGTCTCGTGCGTATCTGACCCACCATGCGGC
TCACTTTGCCAAACTGAACGGCGGTAAGCCTAAGCCCGATAAGCCTAAGG
GTGTTGGGAAGACCCTGGATGATGGTTTCGTTGGCAATATGGCTGAAGTG
TACCATGAGATTACTGATGTCCTTCGTGGCCATGAAGATCTTCATTCTTC
TCGCCATCTGGCTGCTCGCCAGCTTGGGCTACGCAACTATTGTCACCTTG
ACTGTCTGTAAGACAGACGTGTCCCTCGCCCCCACCGTTGGAACTTTTTC
GTTGCCAACCATCGTGACCGCTGCGACTTTGGCTCCAACTGTTGTCGTGA
CCGGTGTTGTGCCCACTGAGATTTCTATTGGACTGCCCACTGAGTTTGCT
CCTGAAATTCAAACTGGAGTCCTTACTGGTGAATCTCATTCCACTGATAC
GACTGTTGTGCCAACCAACTCTGTGGTCTCAGGACTGTCCTCCTTCCTGA
CTGGAAGTCAAACTGTCTCTGAGATAACTGGCTCCACTGAAAACCACACT
ATCACCACCGAAATCAATGCATCGGCTGTCACCAGCACCTTTGCCCATAC
CACGTTCCCTACCGCAAATGCTGGGAACGACCATGAGGGCATGGCTTCGT
CCGCAGTTGCGTTGTTGGTTGCTTTGATCTTTAGTCTCGTGCGTATCTGA
CCCACCATGCGGCTCACTTTGCCAAACTGAACGGCGGTAAGCCTAAGCCC
GATAAGCCTAAGGGTGTTGGGAAGACCCTGGATGATGGTTTCGTTGGCAA
TATGGCTGAAGTGTACCATGAGATTACTGATGTCCTTCGTGGCCATGAAG
ATCTTCATTCTTCTCGCCATCTGGCTGCTCGCCAGCTTGGGCTACGCAAC
TA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57120ATCC64974_57120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57120-T1ATCC64974_57120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57120-T1.cdsATCC64974_57120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57120-T1.exon4ATCC64974_57120-T1.exon4Aspergillus niger N402exon
ATCC64974_57120-T1.exon3ATCC64974_57120-T1.exon3Aspergillus niger N402exon
ATCC64974_57120-T1.exon2ATCC64974_57120-T1.exon2Aspergillus niger N402exon
ATCC64974_57120-T1.exon1ATCC64974_57120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4532306..4533131 -
Powered by Drupal