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ATCC64974_57230-T1, ATCC64974_57230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57230-T1
Unique NameATCC64974_57230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4583295..4584168+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57230-T1 ID=ATCC64974_57230-T1|Name=ATCC64974_57230-T1|organism=Aspergillus niger N402|type=mRNA|length=874bp|location=Sequence derived from alignment at OGUI01000007.1:4583295..4584168+ (Aspergillus niger N402)
ATGCTCATCCATCTGACTTGTGTTATTTCCCAGAGTGTGGAATCATCCAG
CAGTGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATG
ATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGC
GCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCG
TGCGTTAACCCTCGTTCTCCTCCTTAGATTGATCTAGGTTTTGAGAGACG
CTAATATACTTCAGTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAG
AGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAG
AAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAA
AACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGC
ATTTCCATTCCGGGGGACCTCCCAAAAAGGTGAGTCTCGGTCTCACCGTA
AGGCTTAGATGGTCATGAACTCCCATTAACCAGAAAATTTCAGTACGCAA
TTCGACCTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATC
AAGACCGTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAA
CTATGACTTGATCATTCTCGTCACCGTTATCCAGGTCAGTTTTCTACGGA
CGTAGTGTGGTGTTTAAGTCGCTCATACAAGTACCGTAACTGACAATAAA
TTATCAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGT
TAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAG
GCCGCCGAATCTACTAAGGACTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4583295..4584168+

>ATCC64974_57230-T1 ID=ATCC64974_57230-T1|Name=ATCC64974_57230-T1|organism=Aspergillus niger N402|type=CDS|length=2688bp|location=Sequence derived from alignment at OGUI01000007.1:4583295..4584168+ (Aspergillus niger N402)
ATGCTCATCCATCTGACTTGTGTTATTTCCCAGAGTGTGGAATCATCCAG
CAGTGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATG
ATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGC
GCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCT
GTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATC
AGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGG
ATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGA
CCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGG
GACCTCCCAAAAAGTACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAG
TTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGA
ACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTA
TCCAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTA
AAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGC
CGCCGAATCTACTAAGGACTAAATGCTCATCCATCTGACTTGTGTTATTT
CCCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGAC
TCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGAGA
GGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCA
TCAGAATGGATTTGCCATGTCTGTTGTTTGTGCGATTTGACAAATCCATC
AATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCC
TGAAAAGAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCCG
TTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTC
AAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTACGCAATTCGACC
TGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCG
TTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGAC
TTGATCATTCTCGTCACCGTTATCCAGAATGTCATTGGCATGAGTGTTGC
CGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACA
GTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAAATGCTC
ATCCATCTGACTTGTGTTATTTCCCAGAGTGTGGAATCATCCAGCAGTGA
CAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATGATGACA
TCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGC
AAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCTGTTGTT
TGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGCTTT
GCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATCCAA
CGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTGGA
GTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGACCTC
CCAAAAAGTACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTCAAC
CGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACATCC
CGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTATCCAGA
ATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAG
TATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGA
ATCTACTAAGGACTAAATGCTCATCCATCTGACTTGTGTTATTTCCCAGA
GTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGACTCGGAT
GAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGA
AGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAA
TGGATTTGCCATGTCTGTTGTTTGTGCGATTTGACAAATCCATCAATCCA
GAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAA
GAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCA
AAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCG
CATTTCCATTCCGGGGGACCTCCCAAAAAGTACGCAATTCGACCTGTGGT
GAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAG
ATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTGATC
ATTCTCGTCACCGTTATCCAGAATGTCATTGGCATGAGTGTTGCCGGAAG
TGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAG
CACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57230ATCC64974_57230Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57230-T1.exon1ATCC64974_57230-T1.exon1Aspergillus niger N402exon
ATCC64974_57230-T1.exon2ATCC64974_57230-T1.exon2Aspergillus niger N402exon
ATCC64974_57230-T1.exon3ATCC64974_57230-T1.exon3Aspergillus niger N402exon
ATCC64974_57230-T1.exon4ATCC64974_57230-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57230-T1.cdsATCC64974_57230-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57230-T1ATCC64974_57230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264829
DBxrefInterPro:IPR040183
DBxrefInterPro:IPR004114
DBxrefPFAM:PF02926
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4583295..4584168 +
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