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ATCC64974_57260-T1, ATCC64974_57260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57260-T1
Unique NameATCC64974_57260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4591934..4592964-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57260-T1 ID=ATCC64974_57260-T1|Name=ATCC64974_57260-T1|organism=Aspergillus niger N402|type=mRNA|length=1031bp|location=Sequence derived from alignment at OGUI01000007.1:4591934..4592964- (Aspergillus niger N402)
ATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTC
TTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGC
TGCAGAAAGGTACGCTGTGAACCCCGCTCCCGTTAATTGGCCGCCACTAA
CGAGTTTCCAGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACAT
CGTAAGTTGGACCTGAAGCGAGATAAAATCAGATCTATCTGCTAACCACC
TGTTTCTCTAGCTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGG
ACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAG
ACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTC
CTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGT
AAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGC
CGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTA
ACCCGGTTTGCCATCAAATGGTAGGTATCATCTATTTGTTTTTCTTGTCA
TACGATACTAATAACTACCGCCTAGGGACTCGGAGGAATCTGCCCCCGCT
GAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGC
CGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGC
TCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAA
GGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTC
TGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGG
AAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAG
CAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCA
TCAACAACAGCCCGAGTTGATGGTGCACTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4591934..4592964-

>ATCC64974_57260-T1 ID=ATCC64974_57260-T1|Name=ATCC64974_57260-T1|organism=Aspergillus niger N402|type=CDS|length=3456bp|location=Sequence derived from alignment at OGUI01000007.1:4591934..4592964- (Aspergillus niger N402)
GGACTCGGAGGAATCTGCCCCCGCTGAATACCCGCCAGATCAGCCCGAAG
CCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAG
CTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGA
AGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGG
AGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGAC
GAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGA
CGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCG
CCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTG
CACTAACTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGA
TCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTC
AAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCAC
TTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACA
ACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATC
ATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCG
GTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCG
ACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCT
GCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGA
ACAGCTGCAGAAAGGGACTCGGAGGAATCTGCCCCCGCTGAATACCCGCC
AGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTG
CAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTG
GAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCAC
CAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCG
AAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGAC
GACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGA
ATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGC
CCGAGTTGATGGTGCACTAACTCCGAGTATGACCAGGAACTCGACTCCCT
GCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCG
ACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACC
GTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGG
TTACTATGTAAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGC
CGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAG
CCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCT
ACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAA
TCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACT
TTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGGAGGAATCTGCCCCC
GCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAG
TGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGG
AGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACC
GAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGA
GTCTGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACG
AGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCC
GAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGC
CCATCAACAACAGCCCGAGTTGATGGTGCACTAACTCCGAGTATGACCAG
GAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTT
CATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAA
TCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAA
TTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCT
TATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATA
TCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGA
GTGGAAGCTCACCTACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCT
TCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATC
AATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGG
AGGAATCTGCCCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAG
GAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGC
AGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGG
AGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGAT
ATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGACGAAGATGA
GGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAA
TGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAAC
AACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTGCACTAACT
CCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTT
GGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCAT
CCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCT
ATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATAC
GATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACG
CATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCA
TCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCATG
TCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTT
CCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGC
AGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0016573histone acetylation
GO:0006334nucleosome assembly
GO:0006337nucleosome disassembly
GO:0006333chromatin assembly or disassembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASF1ATCC64974_57260Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57260-T1ATCC64974_57260-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57260-T1.cdsATCC64974_57260-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57260-T1.exon4ATCC64974_57260-T1.exon4Aspergillus niger N402exon
ATCC64974_57260-T1.exon3ATCC64974_57260-T1.exon3Aspergillus niger N402exon
ATCC64974_57260-T1.exon2ATCC64974_57260-T1.exon2Aspergillus niger N402exon
ATCC64974_57260-T1.exon1ATCC64974_57260-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264COX
DBxrefInterPro:IPR006818
DBxrefInterPro:IPR017282
DBxrefInterPro:IPR036747
DBxrefPFAM:PF04729
ProductHistone chaperone asf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4591934..4592964 -
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