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ATCC64974_57280-T1, ATCC64974_57280-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57280-T1
Unique NameATCC64974_57280-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4597551..4599179+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57280-T1 ID=ATCC64974_57280-T1|Name=ATCC64974_57280-T1|organism=Aspergillus niger N402|type=mRNA|length=1629bp|location=Sequence derived from alignment at OGUI01000007.1:4597551..4599179+ (Aspergillus niger N402)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGGTAAGAACCTATCCCCCACTCCCAATGCCCATCATTCATCA
TCTAATCCGATGTGCCTAGTGAACTTGCCCTCCAAATCTACGAACAAATC
AAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGG
CACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCG
TGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCC
GACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGC
AGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAA
CCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTC
ACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCC
GTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACG
CCTCTATCCCCCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACC
CACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTC
CAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGG
AGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTG
CTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGC
GGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTC
CGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGAT
TATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTC
GGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGG
AGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTT
GAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAA
GAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGA
AGAGGAATAAGTTGAAGAAGGTGCGGTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:4597551..4599179+

>ATCC64974_57280-T1 ID=ATCC64974_57280-T1|Name=ATCC64974_57280-T1|organism=Aspergillus niger N402|type=CDS|length=3138bp|location=Sequence derived from alignment at OGUI01000007.1:4597551..4599179+ (Aspergillus niger N402)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGTGAACTTGCCCTCCAAATCTACGAACAAATCAAAGCCATCT
CCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGGCACCGACATG
CGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCGTGATCGCCAC
GCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCCGACACCATCC
GCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGCAGACCGGCTC
CTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAACCTGCCTCTC
AGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTCACAGCAACCC
TAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCCGTCCACCAAA
CCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACGCCTCTATCCC
CCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACCCACCGCGAAG
CCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTCCAAACCAGCC
ATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGGAGCGCATGCT
CCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTGCTGCCGCAGT
CGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGCGGCGAGGTTG
CTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTCCGTCGGTGGA
GTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGATTATGTGCATC
GGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTCGGTCACGCTT
GTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGGAGAGGGTGGG
TAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTTGAGGGTAGGG
TTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAAGAGAGAGGCT
GCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGAAGAGGAATAA
GTTGAAGAAGGTGCGGTAGATGGCGCCCTCCAGCTCTCCAGAACCTGTTG
TGGACGAATCCCACGAGTCCTCTGACTCGGAGGTCGAGCAGACCGAACTG
CAATCCCGCGCCCCCAAGAGAAGACGTCTCTCGGAGTCTTCCACCGACTC
CTACGTTGCTCCGGCGCCGCTCCCCACACTCTCCCGTATCAAGAAGAAGG
GCGCAGATGAAGAGAATAAGCCCGCCACATCGGATAAAGACGAGCCTGTC
CTGATCAAGGATGCTCTGGAGATTGGTCTCAATGATGCGCAGAACTCATT
CGCCTCTCTCAACGTGGCGCCGTGGTTGATCGGCTCCCTAACCACCATGG
CTGTTCGCAAACCAACCGCCATTCAAAAAGCGTGTATTCCTGAGATCCTA
AACGGCCGGGACTGCATTGGTGGAAGCCGGACTGGTTCCGGTAAGACCAT
TGCCTTCTCAGTGCCCATGCTGCAGAAATGGGCGGAGGATCCATTCGGTA
TCTTCGGCCTTGTCCTCACTCCAACTCGTGAACTTGCCCTCCAAATCTAC
GAACAAATCAAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCAT
CACCGGCGGCACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCC
CACACGTCGTGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACC
TCCGGCTCCGACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCT
CGACGAAGCAGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGG
ACGTGGAAACCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACC
CTCCTCTTCACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCAT
GCCCCGGCCGTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCG
AAAACAACGCCTCTATCCCCCCGACCCTTAAACAAACCTACCTCAAAGTC
CCCATGACCCACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGC
GAACGCCTCCAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGG
ACTTGCTGGAGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTG
CATAGTCTGCTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAG
AGCGTCCGCGGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTT
TGGATATTCCGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAAT
CCGGATGATTATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAA
GGGTGAGTCGGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGG
CGATTGAGGAGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGT
GTTAGTGTTGAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGG
TGAGGCCAAGAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGT
TGGGAAGGAAGAGGAATAAGTTGAAGAAGGTGCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP8ATCC64974_57280Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57280-T1.exon1ATCC64974_57280-T1.exon1Aspergillus niger N402exon
ATCC64974_57280-T1.exon2ATCC64974_57280-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57280-T1.cdsATCC64974_57280-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57280-T1ATCC64974_57280-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductPutative RNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4597551..4599179 +
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