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ATCC64974_57430-T1, ATCC64974_57430-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57430-T1
Unique NameATCC64974_57430-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4647240..4648107-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57430-T1 ID=ATCC64974_57430-T1|Name=ATCC64974_57430-T1|organism=Aspergillus niger N402|type=mRNA|length=868bp|location=Sequence derived from alignment at OGUI01000007.1:4647240..4648107- (Aspergillus niger N402)
ATGAGCCGCCCCGACATTACCCTGTACACTGCGCAGACTCCCAATGGGAT
TAAGATTTCCATTGCGCTGGAGGAGCTTGGGTATGCCAAACATACACCTT
CCTGGGATAATCGGCAATTGACTAAAGCGATAATCCAGTCTGCCCTACAA
AGTCGAGAAGATTGACATCTCCAAGAACACCCAGAAAGAGCCGTATGCTC
CCTAACCCCCTTCCTCACATCAACTCACCACCACTAACCACCAACACAGA
TGGTTCCTCGAAATCAACCCCAACGGCCGCATCCCCGCCTTAACCGACAC
CTTCACGGATGGGTCCAAGATCCGGCTTTTCGAATCCGGCAGCATCCTCA
CCTACCTGGCGGAACAATACGACAAAGACCACAAGATCTCCTACCCCCAG
GGAACCCGCGAATACTACGAACAGAACAGCTGGCTCTACTTCCAGAACGC
CGGTGTCGGGCCCATGCAAGGCCAAGCGAACCACTTCCACCGGTACGCGC
CCGAGCGCATCGAGTACGGCGTGAACCGCTACATCAACGAGACACGACGT
CTATACAGTGTGCTGGATGCGCACCTCGCCAAGTCGAAGTCTGGGTATCT
TGTTGGTGATCACGTCAGTATTGCGGATATTTCGCATTGGGGATGGGTTG
CGGCGGCCGGGTGGGCGGGAGTTGATATTGAGGAGTTCCCGAATCTGAAG
GCGTGGGAGGAGCGCATGGCTGCTAGGGAGGGCGTTGAGAAGGGTAGGCA
TGTGCCGAGTCCGCATACTATTAAGGAGCTCTTGAAGGATAAGGCCAAGG
CGGAGAAGATTGCGGAGGAGTCGAAGGGGTGGATTCAGCAGGGGATGAAG
GCGGATGCTAAGCATTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:4647240..4648107-

>ATCC64974_57430-T1 ID=ATCC64974_57430-T1|Name=ATCC64974_57430-T1|organism=Aspergillus niger N402|type=CDS|length=2259bp|location=Sequence derived from alignment at OGUI01000007.1:4647240..4648107- (Aspergillus niger N402)
ATGGTTCCTCGAAATCAACCCCAACGGCCGCATCCCCGCCTTAACCGACA
CCTTCACGGATGGGTCCAAGATCCGGCTTTTCGAATCCGGCAGCATCCTC
ACCTACCTGGCGGAACAATACGACAAAGACCACAAGATCTCCTACCCCCA
GGGAACCCGCGAATACTACGAACAGAACAGCTGGCTCTACTTCCAGAACG
CCGGTGTCGGGCCCATGCAAGGCCAAGCGAACCACTTCCACCGGTACGCG
CCCGAGCGCATCGAGTACGGCGTGAACCGCTACATCAACGAGACACGACG
TCTATACAGTGTGCTGGATGCGCACCTCGCCAAGTCGAAGTCTGGGTATC
TTGTTGGTGATCACGTCAGTATTGCGGATATTTCGCATTGGGGATGGGTT
GCGGCGGCCGGGTGGGCGGGAGTTGATATTGAGGAGTTCCCGAATCTGAA
GGCGTGGGAGGAGCGCATGGCTGCTAGGGAGGGCGTTGAGAAGGGTAGGC
ATGTGCCGAGTCCGCATACTATTAAGGAGCTCTTGAAGGATAAGGCCAAG
GCGGAGAAGATTGCGGAGGAGTCGAAGGGGTGGATTCAGCAGGGGATGAA
GGCGGATGCTAAGCATTAGTCTGCCCTACAAAGTCGAGAAGATTGACATC
TCCAAGAACACCCAGAAAGAGCCATGAGCCGCCCCGACATTACCCTGTAC
ACTGCGCAGACTCCCAATGGGATTAAGATTTCCATTGCGCTGGAGGAGCT
TGGATGGTTCCTCGAAATCAACCCCAACGGCCGCATCCCCGCCTTAACCG
ACACCTTCACGGATGGGTCCAAGATCCGGCTTTTCGAATCCGGCAGCATC
CTCACCTACCTGGCGGAACAATACGACAAAGACCACAAGATCTCCTACCC
CCAGGGAACCCGCGAATACTACGAACAGAACAGCTGGCTCTACTTCCAGA
ACGCCGGTGTCGGGCCCATGCAAGGCCAAGCGAACCACTTCCACCGGTAC
GCGCCCGAGCGCATCGAGTACGGCGTGAACCGCTACATCAACGAGACACG
ACGTCTATACAGTGTGCTGGATGCGCACCTCGCCAAGTCGAAGTCTGGGT
ATCTTGTTGGTGATCACGTCAGTATTGCGGATATTTCGCATTGGGGATGG
GTTGCGGCGGCCGGGTGGGCGGGAGTTGATATTGAGGAGTTCCCGAATCT
GAAGGCGTGGGAGGAGCGCATGGCTGCTAGGGAGGGCGTTGAGAAGGGTA
GGCATGTGCCGAGTCCGCATACTATTAAGGAGCTCTTGAAGGATAAGGCC
AAGGCGGAGAAGATTGCGGAGGAGTCGAAGGGGTGGATTCAGCAGGGGAT
GAAGGCGGATGCTAAGCATTAGTCTGCCCTACAAAGTCGAGAAGATTGAC
ATCTCCAAGAACACCCAGAAAGAGCCATGAGCCGCCCCGACATTACCCTG
TACACTGCGCAGACTCCCAATGGGATTAAGATTTCCATTGCGCTGGAGGA
GCTTGGATGGTTCCTCGAAATCAACCCCAACGGCCGCATCCCCGCCTTAA
CCGACACCTTCACGGATGGGTCCAAGATCCGGCTTTTCGAATCCGGCAGC
ATCCTCACCTACCTGGCGGAACAATACGACAAAGACCACAAGATCTCCTA
CCCCCAGGGAACCCGCGAATACTACGAACAGAACAGCTGGCTCTACTTCC
AGAACGCCGGTGTCGGGCCCATGCAAGGCCAAGCGAACCACTTCCACCGG
TACGCGCCCGAGCGCATCGAGTACGGCGTGAACCGCTACATCAACGAGAC
ACGACGTCTATACAGTGTGCTGGATGCGCACCTCGCCAAGTCGAAGTCTG
GGTATCTTGTTGGTGATCACGTCAGTATTGCGGATATTTCGCATTGGGGA
TGGGTTGCGGCGGCCGGGTGGGCGGGAGTTGATATTGAGGAGTTCCCGAA
TCTGAAGGCGTGGGAGGAGCGCATGGCTGCTAGGGAGGGCGTTGAGAAGG
GTAGGCATGTGCCGAGTCCGCATACTATTAAGGAGCTCTTGAAGGATAAG
GCCAAGGCGGAGAAGATTGCGGAGGAGTCGAAGGGGTGGATTCAGCAGGG
GATGAAGGCGGATGCTAAGCATTAGTCTGCCCTACAAAGTCGAGAAGATT
GACATCTCCAAGAACACCCAGAAAGAGCCATGAGCCGCCCCGACATTACC
CTGTACACTGCGCAGACTCCCAATGGGATTAAGATTTCCATTGCGCTGGA
GGAGCTTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57430ATCC64974_57430Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57430-T1ATCC64974_57430-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57430-T1.cdsATCC64974_57430-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57430-T1.exon3ATCC64974_57430-T1.exon3Aspergillus niger N402exon
ATCC64974_57430-T1.exon2ATCC64974_57430-T1.exon2Aspergillus niger N402exon
ATCC64974_57430-T1.exon1ATCC64974_57430-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4647240..4648107 -
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