You are here

Home

ATCC64974_57550-T1, ATCC64974_57550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57550-T1
Unique NameATCC64974_57550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4698858..4699908+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57550-T1 ID=ATCC64974_57550-T1|Name=ATCC64974_57550-T1|organism=Aspergillus niger N402|type=mRNA|length=1051bp|location=Sequence derived from alignment at OGUI01000007.1:4698858..4699908+ (Aspergillus niger N402)
ATGTCTGAATCAACCAGCACAAATACCCCCAAGCCGAGTAGCAGCGTCAA
GCTGGTACTTTTGGGTGAAGCCGCTGTGGGAAAGGTACGACCAACCTCGG
CACTTTCCTTGCTTTGACCTCCGCGTGGTACCTGAGTAACCAAAGAAGAA
AGAAGACTGACAATGAACGCAATGGATGATTGCCCATTATAGTCCTCCCT
GGTGCTGAGATTTGTCAACAACGATTTCCAAGAAAACAAAGAACCAACTA
TTGGAGGTAAGCTTTTCCGATTTTGGCAGTTACAGATCACTTTCTCTGGA
TTGGGAAGAGAGAGAGGGAAAGGAAGAAGAAGAAGGGAAATTGTTCCCGG
TTTTCTTGGTTTCCGAAAGTGGCCGTATCTCCGATGCTGATGTCATTGCC
TCTATAATAGCTGCATTTCTTACCCAAAAATGTTCCCTGCCTACGCGAAC
GATCAAGTTCGAAATTTGGGATACCGCCGGTCAGGAGCGCTTCGCTTCGC
TCGCTCCCATGTACTACCGTAACGCCCAGGCGGCGCTCGTGGTCTATGAT
GTTACCAAACCGTCCTCTCTCACAAAGGCTAAGCACTGGGTTGCGGAACT
CCAGCGACAAGCTAGTCCCGGCATTGTGATTGCTCTTGTTGGCAACAAGC
TGGATTTGACAAACGACGGGAACGAGGCGACCGGGGAGTCGCCCGCTGAT
GCCGAGGGCGAATCGTCTACGGCCGATGCAGATGAAACCGCCGAAGAACC
TCAGGAAGCACAGGATGTCACTTCCGGCGATGCTCGGAAGGTGCCTACAC
GGGAAGCTAGCGCCTACGCAGAGGAAGAGGGTCTCCTGTTCTTCGAGACT
AGTGCCAAGACGGGCACGAATGTCGTGGATGTCTTTACTGCGATTGCCAA
CGCGATCCCGGAGAGCAGCCTGAAGAGTGGACGAGCAGGTGGCGCTGGCA
CGGGCCAGACTAGCCTGAACAGCGGTCGTCCGGCTGAAGACTCGCGGGTC
AACCTGGGGGAGCGCGGCCCGGCAACTGCAAAGGAAGGGTGTGCCTGCTA
A
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4698858..4699908+

>ATCC64974_57550-T1 ID=ATCC64974_57550-T1|Name=ATCC64974_57550-T1|organism=Aspergillus niger N402|type=CDS|length=2367bp|location=Sequence derived from alignment at OGUI01000007.1:4698858..4699908+ (Aspergillus niger N402)
ATGTCTGAATCAACCAGCACAAATACCCCCAAGCCGAGTAGCAGCGTCAA
GCTGGTACTTTTGGGTGAAGCCGCTGTGGGAAAGTCCTCCCTGGTGCTGA
GATTTGTCAACAACGATTTCCAAGAAAACAAAGAACCAACTATTGGAGCT
GCATTTCTTACCCAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTCGA
AATTTGGGATACCGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCATGT
ACTACCGTAACGCCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAACCG
TCCTCTCTCACAAAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAAGC
TAGTCCCGGCATTGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGACAA
ACGACGGGAACGAGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCGAA
TCGTCTACGGCCGATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCACA
GGATGTCACTTCCGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAGCG
CCTACGCAGAGGAAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGACG
GGCACGAATGTCGTGGATGTCTTTACTGCGATTGCCAACGCGATCCCGGA
GAGCAGCCTGAAGAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGACTA
GCCTGAACAGCGGTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGGAG
CGCGGCCCGGCAACTGCAAAGGAAGGGTGTGCCTGCTAAATGTCTGAATC
AACCAGCACAAATACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGTACTTT
TGGGTGAAGCCGCTGTGGGAAAGTCCTCCCTGGTGCTGAGATTTGTCAAC
AACGATTTCCAAGAAAACAAAGAACCAACTATTGGAGCTGCATTTCTTAC
CCAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGATA
CCGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTAAC
GCCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTCAC
AAAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGGCA
TTGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGAAC
GAGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACGGC
CGATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCACTT
CCGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAGAG
GAAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAATGT
CGTGGATGTCTTTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCTGA
AGAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACAGC
GGTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCGGC
AACTGCAAAGGAAGGGTGTGCCTGCTAAATGTCTGAATCAACCAGCACAA
ATACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGTACTTTTGGGTGAAGCC
GCTGTGGGAAAGTCCTCCCTGGTGCTGAGATTTGTCAACAACGATTTCCA
AGAAAACAAAGAACCAACTATTGGAGCTGCATTTCTTACCCAAAAATGTT
CCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGATACCGCCGGTCAG
GAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTAACGCCCAGGCGGC
GCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTCACAAAGGCTAAGC
ACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGGCATTGTGATTGCT
CTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGAACGAGGCGACCGG
GGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACGGCCGATGCAGATG
AAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCACTTCCGGCGATGCT
CGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAGAGGAAGAGGGTCT
CCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAATGTCGTGGATGTCT
TTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCTGAAGAGTGGACGA
GCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACAGCGGTCGTCCGGC
TGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCGGCAACTGCAAAGG
AAGGGTGTGCCTGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57550ATCC64974_57550Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57550-T1.exon1ATCC64974_57550-T1.exon1Aspergillus niger N402exon
ATCC64974_57550-T1.exon2ATCC64974_57550-T1.exon2Aspergillus niger N402exon
ATCC64974_57550-T1.exon3ATCC64974_57550-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57550-T1.cdsATCC64974_57550-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57550-T1ATCC64974_57550-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4698858..4699908 +
Powered by Drupal