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ATCC64974_57560-T1, ATCC64974_57560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57560-T1
Unique NameATCC64974_57560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4700585..4701696+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57560-T1 ID=ATCC64974_57560-T1|Name=ATCC64974_57560-T1|organism=Aspergillus niger N402|type=mRNA|length=1112bp|location=Sequence derived from alignment at OGUI01000007.1:4700585..4701696+ (Aspergillus niger N402)
ATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAACCC
CTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGAGCA
ACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCTGCC
CGTGAGGTAAGGATGATTTGGTTTTTTCATACATAGCCTCCGTCCGTGTA
CAGATCAGAGGCGTCGAGAGTTTTTGAATCGCGGAAATTGCCAACATACG
AGACGTTTTGGGGAAATATCAAATATCCATGTGGATATTGTGCGTGTGTG
CGGTCCGCACCTGGATGATGTATACGTGTGCTTGGGGACTGAATACCACC
AGCATCGAGGAAAAGAAGAAAAAAAAAAAAAAAGAAACGAATTGAATCGT
CCCAACAACCGACCGACACTCTGATCTGCTGCGCGAACTGGGGATAAGAA
AATTATTTGTTTTCTCGGATTGTGCGCAATTTGATATTGACTCTACTATC
ACAATAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTTCGTCC
CTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGGTACGATTTT
CCACTCCACAATCATCACCTCCACACCAAATAAAATCTACACCAACATCA
ACCCCGGAATGTGCCAGCCACATGATACCCACAACCCCCGGAGTGTTGGC
AATTAAAAAAACGAAACACCAGAACCATAACTGACAATGATATCATAGCC
TGACCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTT
GCTCAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTC
CAACCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACG
ACGCCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGT
ACCCGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGA
GAAGGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCT
ACCGTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGT
GCCGACTACTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:4700585..4701696+

>ATCC64974_57560-T1 ID=ATCC64974_57560-T1|Name=ATCC64974_57560-T1|organism=Aspergillus niger N402|type=CDS|length=1809bp|location=Sequence derived from alignment at OGUI01000007.1:4700585..4701696+ (Aspergillus niger N402)
ATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAACCC
CTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGAGCA
ACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCTGCC
CGTGAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTTCGTCCC
TGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGCCTGACCCGTG
AGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTGCTCAGCGC
CGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCCAACCAGAA
GCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGACGCCATCC
TCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTACCCGCACC
AAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAGAAGGAGCG
TGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTACCGTCGGT
TGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTGCCGACTAC
TAGATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAA
CCCCTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGA
GCAACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCT
GCCCGTGAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTTCGT
CCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGCCTGACCC
GTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTGCTCAG
CGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCCAACCA
GAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGACGCCA
TCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTACCCGC
ACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAGAAGGA
GCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTACCGTC
GGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTGCCGAC
TACTAGATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCA
GAACCCCTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCG
AGAGCAACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTC
TCTGCCCGTGAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTT
CGTCCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGCCTGA
CCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTGCT
CAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCCAA
CCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGACG
CCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTACC
CGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAGAA
GGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTACC
GTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTGCC
GACTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP15ATCC64974_57560Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57560-T1.exon1ATCC64974_57560-T1.exon1Aspergillus niger N402exon
ATCC64974_57560-T1.exon2ATCC64974_57560-T1.exon2Aspergillus niger N402exon
ATCC64974_57560-T1.exon3ATCC64974_57560-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57560-T1.cdsATCC64974_57560-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57560-T1ATCC64974_57560-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000554
DBxrefPFAM:PF01251
Product40S ribosomal protein S7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4700585..4701696 +
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