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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:4702720..4704819- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_57570-T1 ID=ATCC64974_57570-T1|Name=ATCC64974_57570-T1|organism=Aspergillus niger N402|type=mRNA|length=2100bp|location=Sequence derived from alignment at OGUI01000007.1:4702720..4704819- (Aspergillus niger N402)
ATGTCACGCCCCTTCCCTTACACCTTCATATCTTGTCCTTGCGCCAATAT
CCCCGTTCCTGACCCGGCGAAGAAACGGAGGTCCAGGGAGTCGCCGCAGA
AATCCAACAACCCCGATCAACCCAAACCTCTCCTGCGCCCGGATGACGAC
GAAGATGAACAGGCTTTCGATCCTCGGTCTCCGCGCGCCAATTTCTCTCT
GTATCCCCCGGAGCAGCTGCTTTACTGCGAGGATTGCCATCAGATCAAGT
GCCCGCGATGCATAACCGAGGAGATTGTGTGCTGGTACTGTCCGAACTGC
CTGTTCGAGACGCCCAGCAGTATGGTCCGGAGTGAGGGAAATCGGTAGGT
TGAGCAGGATATACACGTCCTCAAGCCTTTACAAGTGTGTTCTAATGCGG
TAAATGCTAGATGTGCTCGCAATTGCTTCAATTGCCCGATATGCACCGCC
CCTCTGGGCGTCAACACCCTCGAAAACGTCGTGACAGGCGGCACCAGCCA
ACAAGGCCCCTGGGTGTTGTCCTGCGGATACTGCATGTGGTCGACGCTGG
ATATTGGCATCAAGTTCGATAAACCGACCAACATTCGGACTCAATTGTCC
AAGATGACCGAAATCACTCCTGCTCGCTCGAGACAAATGTCCCGGACGTT
CGGGGATCTCAAATCTCCCCTCTCCACATACTCTTCTATCGACGAGCACT
TCCCACCGCCAGGAGAGAATAAGCCCGAAGACTCTCCTCTAGACCAGCCC
AGCGCTCCTCTCACCCCAGATGCCCGATTCCACGCACTCAAGAACTTCTA
CAAGAACCAAATCTCTGCGACATCCTCCTCCCCAACCGACCCCCTAGGCA
TGGACTTCGGCTCCGGCTTCTCCTCCCCCGGTGCCCTAAACCGCATCATG
TCTCTCTACACCTCCTCATCCCGCCTCAGCAGCCTCTACGGCGGAGCCAA
CAAAAAGCCCAAAACCAAACCACCCGTCATGCGAGAAGCCCTCACAGCCA
GCGAGGGGCTCAAGATCCCCTCCCCAGACGCCGAAGACACGCTGATCCAA
CGCATGTCCTCCCCGGACTGCGGATGGGACGGCCTCGCCTCCATCGAACA
ACGCGGCTTCCAATCTCCTGATGCCCGGTTCGTAGAGGACCTCCTCCCGC
TGCCCGTGTTACTTCGCACGAAGCGGTCCAAACGATGCAAGTCGTGCAAG
CACATCCTTGTCAAACCCGAACTGAAACCACAGTCCACGCGGTTCCGCAT
CCGCCTGATTGCCCTCAGCTACATTCCCTTACCGACGTTACGGCCGCTGA
ATCCCAGTCCCTCCCCAGCCACCACCACCACCACTACCACCGTTCTCCCG
ACGCCCTCAAGTTCCACGACGAACCCGAACCTGGACGCTCTCTCCCCGCT
CCGACCCATCCAACTCCTCCTCACGCTGAAGAATCACATGTTCGATCCCG
TCCGCGTCACACTCGCCACGCCATCCGTCACCCCGGGCCGCGTGGCCTCC
AAAGTAACTATCCTCTGTCCGCAATTCGACATTGGCGCCAACAGCGATGT
GTGGGACGAAGCCCTCCAGGGTACTTCGGCTACCACTACTACCACTGCTG
CCGCGGGCACAGGAACTGACCCCCGCGGATCCCGATCCGGAGGGCTAGGC
GTGTATGAGAAAGTCGCCGAGGCCGGGAAAGTCTGGGACAAGGGACGGAA
CTGGACCACCGTGGTGTTGGAAGTCGTACCAGGGACATTACCTGGTGGTG
CGAAAGAACCCTCCTCCTCTACCAACAAGACCAAGAAAGACAAGACGAAG
AAGAAGAGCCCTACCGATGACTTAGACGACCAAGATGAGAACTCTGACGA
TGACGAGTCCGACTCTGACCCGGGTTTCGACTGGAGCGGACAGACATCTG
ATCCCAACCAGCAGTTACAGCCGGATGAAGATGTGCTGGAGATTCCGGTG
TTTGTGCATATGGAGTGGGATTCGGATAATCAGATTGATAGTGAACAGGC
GGTCGGAAGGGCCGGGACGGGTGGGAGTGATACGGTTAAGAGGGAGTTGG
CGTATTGGATGGTGTTGGGGGTGGGGAGAATTGTGAGGGAGATTGTGTAG
back to topCoding sequence (CDS) from alignment at OGUI01000007.1:4702720..4704819- >ATCC64974_57570-T1 ID=ATCC64974_57570-T1|Name=ATCC64974_57570-T1|organism=Aspergillus niger N402|type=CDS|length=4068bp|location=Sequence derived from alignment at OGUI01000007.1:4702720..4704819- (Aspergillus niger N402)
ATGTGCTCGCAATTGCTTCAATTGCCCGATATGCACCGCCCCTCTGGGCG
TCAACACCCTCGAAAACGTCGTGACAGGCGGCACCAGCCAACAAGGCCCC
TGGGTGTTGTCCTGCGGATACTGCATGTGGTCGACGCTGGATATTGGCAT
CAAGTTCGATAAACCGACCAACATTCGGACTCAATTGTCCAAGATGACCG
AAATCACTCCTGCTCGCTCGAGACAAATGTCCCGGACGTTCGGGGATCTC
AAATCTCCCCTCTCCACATACTCTTCTATCGACGAGCACTTCCCACCGCC
AGGAGAGAATAAGCCCGAAGACTCTCCTCTAGACCAGCCCAGCGCTCCTC
TCACCCCAGATGCCCGATTCCACGCACTCAAGAACTTCTACAAGAACCAA
ATCTCTGCGACATCCTCCTCCCCAACCGACCCCCTAGGCATGGACTTCGG
CTCCGGCTTCTCCTCCCCCGGTGCCCTAAACCGCATCATGTCTCTCTACA
CCTCCTCATCCCGCCTCAGCAGCCTCTACGGCGGAGCCAACAAAAAGCCC
AAAACCAAACCACCCGTCATGCGAGAAGCCCTCACAGCCAGCGAGGGGCT
CAAGATCCCCTCCCCAGACGCCGAAGACACGCTGATCCAACGCATGTCCT
CCCCGGACTGCGGATGGGACGGCCTCGCCTCCATCGAACAACGCGGCTTC
CAATCTCCTGATGCCCGGTTCGTAGAGGACCTCCTCCCGCTGCCCGTGTT
ACTTCGCACGAAGCGGTCCAAACGATGCAAGTCGTGCAAGCACATCCTTG
TCAAACCCGAACTGAAACCACAGTCCACGCGGTTCCGCATCCGCCTGATT
GCCCTCAGCTACATTCCCTTACCGACGTTACGGCCGCTGAATCCCAGTCC
CTCCCCAGCCACCACCACCACCACTACCACCGTTCTCCCGACGCCCTCAA
GTTCCACGACGAACCCGAACCTGGACGCTCTCTCCCCGCTCCGACCCATC
CAACTCCTCCTCACGCTGAAGAATCACATGTTCGATCCCGTCCGCGTCAC
ACTCGCCACGCCATCCGTCACCCCGGGCCGCGTGGCCTCCAAAGTAACTA
TCCTCTGTCCGCAATTCGACATTGGCGCCAACAGCGATGTGTGGGACGAA
GCCCTCCAGGGTACTTCGGCTACCACTACTACCACTGCTGCCGCGGGCAC
AGGAACTGACCCCCGCGGATCCCGATCCGGAGGGCTAGGCGTGTATGAGA
AAGTCGCCGAGGCCGGGAAAGTCTGGGACAAGGGACGGAACTGGACCACC
GTGGTGTTGGAAGTCGTACCAGGGACATTACCTGGTGGTGCGAAAGAACC
CTCCTCCTCTACCAACAAGACCAAGAAAGACAAGACGAAGAAGAAGAGCC
CTACCGATGACTTAGACGACCAAGATGAGAACTCTGACGATGACGAGTCC
GACTCTGACCCGGGTTTCGACTGGAGCGGACAGACATCTGATCCCAACCA
GCAGTTACAGCCGGATGAAGATGTGCTGGAGATTCCGGTGTTTGTGCATA
TGGAGTGGGATTCGGATAATCAGATTGATAGTGAACAGGCGGTCGGAAGG
GCCGGGACGGGTGGGAGTGATACGGTTAAGAGGGAGTTGGCGTATTGGAT
GGTGTTGGGGGTGGGGAGAATTGTGAGGGAGATTGTGTAGATGTCACGCC
CCTTCCCTTACACCTTCATATCTTGTCCTTGCGCCAATATCCCCGTTCCT
GACCCGGCGAAGAAACGGAGGTCCAGGGAGTCGCCGCAGAAATCCAACAA
CCCCGATCAACCCAAACCTCTCCTGCGCCCGGATGACGACGAAGATGAAC
AGGCTTTCGATCCTCGGTCTCCGCGCGCCAATTTCTCTCTGTATCCCCCG
GAGCAGCTGCTTTACTGCGAGGATTGCCATCAGATCAAGTGCCCGCGATG
CATAACCGAGGAGATTGTGTGCTGGTACTGTCCGAACTGCCTGTTCGAGA
CGCCCAGCAGTATGGTCCGGAGTGAGGGAAATCGATGTGCTCGCAATTGC
TTCAATTGCCCGATATGCACCGCCCCTCTGGGCGTCAACACCCTCGAAAA
CGTCGTGACAGGCGGCACCAGCCAACAAGGCCCCTGGGTGTTGTCCTGCG
GATACTGCATGTGGTCGACGCTGGATATTGGCATCAAGTTCGATAAACCG
ACCAACATTCGGACTCAATTGTCCAAGATGACCGAAATCACTCCTGCTCG
CTCGAGACAAATGTCCCGGACGTTCGGGGATCTCAAATCTCCCCTCTCCA
CATACTCTTCTATCGACGAGCACTTCCCACCGCCAGGAGAGAATAAGCCC
GAAGACTCTCCTCTAGACCAGCCCAGCGCTCCTCTCACCCCAGATGCCCG
ATTCCACGCACTCAAGAACTTCTACAAGAACCAAATCTCTGCGACATCCT
CCTCCCCAACCGACCCCCTAGGCATGGACTTCGGCTCCGGCTTCTCCTCC
CCCGGTGCCCTAAACCGCATCATGTCTCTCTACACCTCCTCATCCCGCCT
CAGCAGCCTCTACGGCGGAGCCAACAAAAAGCCCAAAACCAAACCACCCG
TCATGCGAGAAGCCCTCACAGCCAGCGAGGGGCTCAAGATCCCCTCCCCA
GACGCCGAAGACACGCTGATCCAACGCATGTCCTCCCCGGACTGCGGATG
GGACGGCCTCGCCTCCATCGAACAACGCGGCTTCCAATCTCCTGATGCCC
GGTTCGTAGAGGACCTCCTCCCGCTGCCCGTGTTACTTCGCACGAAGCGG
TCCAAACGATGCAAGTCGTGCAAGCACATCCTTGTCAAACCCGAACTGAA
ACCACAGTCCACGCGGTTCCGCATCCGCCTGATTGCCCTCAGCTACATTC
CCTTACCGACGTTACGGCCGCTGAATCCCAGTCCCTCCCCAGCCACCACC
ACCACCACTACCACCGTTCTCCCGACGCCCTCAAGTTCCACGACGAACCC
GAACCTGGACGCTCTCTCCCCGCTCCGACCCATCCAACTCCTCCTCACGC
TGAAGAATCACATGTTCGATCCCGTCCGCGTCACACTCGCCACGCCATCC
GTCACCCCGGGCCGCGTGGCCTCCAAAGTAACTATCCTCTGTCCGCAATT
CGACATTGGCGCCAACAGCGATGTGTGGGACGAAGCCCTCCAGGGTACTT
CGGCTACCACTACTACCACTGCTGCCGCGGGCACAGGAACTGACCCCCGC
GGATCCCGATCCGGAGGGCTAGGCGTGTATGAGAAAGTCGCCGAGGCCGG
GAAAGTCTGGGACAAGGGACGGAACTGGACCACCGTGGTGTTGGAAGTCG
TACCAGGGACATTACCTGGTGGTGCGAAAGAACCCTCCTCCTCTACCAAC
AAGACCAAGAAAGACAAGACGAAGAAGAAGAGCCCTACCGATGACTTAGA
CGACCAAGATGAGAACTCTGACGATGACGAGTCCGACTCTGACCCGGGTT
TCGACTGGAGCGGACAGACATCTGATCCCAACCAGCAGTTACAGCCGGAT
GAAGATGTGCTGGAGATTCCGGTGTTTGTGCATATGGAGTGGGATTCGGA
TAATCAGATTGATAGTGAACAGGCGGTCGGAAGGGCCGGGACGGGTGGGA
GTGATACGGTTAAGAGGGAGTTGGCGTATTGGATGGTGTTGGGGGTGGGG
AGAATTGTGAGGGAGATTGTGTAGATGTCACGCCCCTTCCCTTACACCTT
CATATCTTGTCCTTGCGCCAATATCCCCGTTCCTGACCCGGCGAAGAAAC
GGAGGTCCAGGGAGTCGCCGCAGAAATCCAACAACCCCGATCAACCCAAA
CCTCTCCTGCGCCCGGATGACGACGAAGATGAACAGGCTTTCGATCCTCG
GTCTCCGCGCGCCAATTTCTCTCTGTATCCCCCGGAGCAGCTGCTTTACT
GCGAGGATTGCCATCAGATCAAGTGCCCGCGATGCATAACCGAGGAGATT
GTGTGCTGGTACTGTCCGAACTGCCTGTTCGAGACGCCCAGCAGTATGGT
CCGGAGTGAGGGAAATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005869 | dynactin complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_57570-T1 | ATCC64974_57570-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008603 |
| DBxref | PFAM:PF05502 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:4702720..4704819 - |
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