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ATCC64974_57630-T1, ATCC64974_57630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57630-T1
Unique NameATCC64974_57630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4719844..4721446-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57630-T1 ID=ATCC64974_57630-T1|Name=ATCC64974_57630-T1|organism=Aspergillus niger N402|type=mRNA|length=1603bp|location=Sequence derived from alignment at OGUI01000007.1:4719844..4721446- (Aspergillus niger N402)
ATGGCTGCCCGTCCTCAGAACATTGGTATCAAGGCCATTGAGGTCTACTT
CCCTCGTCAGGTTCGTGCCTCTTGCCACCCCATGACTATCTGCTGCTTCC
TATTTTGAGCTGTGTTCTAATATGTCCCCGTGCTTTCTAGTGTGTCGACC
AGAGCGAGCTTGAGAAATTCGATGGCGTGAGCGAAGGCAAATACACCATT
GGTCTTGGTCAGACCAAGATGAGCTTCTGTGATGACCGTGAAGGTATGCT
TTTGAGGAAATGACAGACATCGTCCGCATGTCATGATTGCGTGGCAATGC
TAACATGCACTTACCGGCAGACATCTACTCCATTGCTTTGACCACCTTCT
CCTCCCTTCTCCGCAAGTACAACATCGACCCCAACTCCATTGGCCGCCTG
GAGGTCGGTACCGAGACCTTGCTGGACAAGTCCAAGTCCGTCAAGTCCGT
CCTGATGCAGCTTCTGGCTCCCCACGGAAACACCAACGTTGAGGGTGTTG
ACAACGTCAATGCTTGCTACGGTGGCACCAACGCTGTTTTCAACAGCATC
AACTGGCTCGAGTCCTCTGCCTGGGATGGCAGAGATGCCGTTGTTGTCTG
CGGTGACATTGCCCTGTACGCCGAGGGTGCTGCTCGCCCTACCGGTGGTG
CTGGCTGTGTCGCCATGCTGATCGGTCCTGACGCCCCTATTGTGTTCGAG
CCCGGTCTTCGTGCCTCCTACGTCACCCACGCCTACGACTTCTTCAAGCC
CGACCTGACCAGCGAGTACCCTGTCGTGGATGGTCACTTCTCCCTCAGAT
GCTACACTGAGGCTGTCGACGCTTGCTACAAGGCCTACAATGCTCGTGAG
AAGACCTTGAAGGAGAAGGTTCAGAACGGTACCAACGGCACCGCCCAGGA
CGACTCCAAGACTGCCTTGGACCGCTTCGACTACCTCTGCTACCATGCTC
CTACCTGCAAGCTGGTGCAGAAATCCTTCGCTCGTATGCTGTACAACGAC
TACCTCACAAACCCCACTCACCCTGCTTTCGCCGAAGTGGCTCCTGAGCT
CCGTGATTTGGACTACGCCACCTCTCTCACTGACAAGAACGTGGAGAAGA
CCTTCATGGGCCTGACCAAGAAGCGCTTCGCTGAGCGTGTTAAGCCCGCT
CTCGAGGTTGCCACTCTTTGCGGTAACATGTACACTGCCACCGTTTGGGC
TGGTCTGGCTAGCTTGATCTCTCACGTCCCCTTCGATGCTAGCGAGTCCA
AGCGCATCGGTCTCTTCTCCTACGGCAGTGGTCTTGCCAGCTCCCTGCTT
AGCGTAAAGATTGTCGGAGACGTGTCCAACCTGGTGGAGAAGCTCGATCT
CAAGAACCGTCTTAGCAACCGCAACGTTCTCCCTCCTCAGTCCTACGTTG
ACGTAAGTACTTCAACGACTATCTTTGACCCACACCTTGAACTCTAGTTG
CTAACGTCCACTTAGATGTGTGCCCTCCGTGAGCATGCTCACCTCAAGAA
GAACTTCAAGCCTTCCGGCAACACCGAGACTCTCTACCCTGGTACTTACT
ACTTGACTGAGGTGGACGATATGTTCCGCCGCAAGTACGACGTCAAGGCA
TGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4719844..4721446-

>ATCC64974_57630-T1 ID=ATCC64974_57630-T1|Name=ATCC64974_57630-T1|organism=Aspergillus niger N402|type=CDS|length=5532bp|location=Sequence derived from alignment at OGUI01000007.1:4719844..4721446- (Aspergillus niger N402)
ATGTGTGCCCTCCGTGAGCATGCTCACCTCAAGAAGAACTTCAAGCCTTC
CGGCAACACCGAGACTCTCTACCCTGGTACTTACTACTTGACTGAGGTGG
ACGATATGTTCCGCCGCAAGTACGACGTCAAGGCATGAACATCTACTCCA
TTGCTTTGACCACCTTCTCCTCCCTTCTCCGCAAGTACAACATCGACCCC
AACTCCATTGGCCGCCTGGAGGTCGGTACCGAGACCTTGCTGGACAAGTC
CAAGTCCGTCAAGTCCGTCCTGATGCAGCTTCTGGCTCCCCACGGAAACA
CCAACGTTGAGGGTGTTGACAACGTCAATGCTTGCTACGGTGGCACCAAC
GCTGTTTTCAACAGCATCAACTGGCTCGAGTCCTCTGCCTGGGATGGCAG
AGATGCCGTTGTTGTCTGCGGTGACATTGCCCTGTACGCCGAGGGTGCTG
CTCGCCCTACCGGTGGTGCTGGCTGTGTCGCCATGCTGATCGGTCCTGAC
GCCCCTATTGTGTTCGAGCCCGGTCTTCGTGCCTCCTACGTCACCCACGC
CTACGACTTCTTCAAGCCCGACCTGACCAGCGAGTACCCTGTCGTGGATG
GTCACTTCTCCCTCAGATGCTACACTGAGGCTGTCGACGCTTGCTACAAG
GCCTACAATGCTCGTGAGAAGACCTTGAAGGAGAAGGTTCAGAACGGTAC
CAACGGCACCGCCCAGGACGACTCCAAGACTGCCTTGGACCGCTTCGACT
ACCTCTGCTACCATGCTCCTACCTGCAAGCTGGTGCAGAAATCCTTCGCT
CGTATGCTGTACAACGACTACCTCACAAACCCCACTCACCCTGCTTTCGC
CGAAGTGGCTCCTGAGCTCCGTGATTTGGACTACGCCACCTCTCTCACTG
ACAAGAACGTGGAGAAGACCTTCATGGGCCTGACCAAGAAGCGCTTCGCT
GAGCGTGTTAAGCCCGCTCTCGAGGTTGCCACTCTTTGCGGTAACATGTA
CACTGCCACCGTTTGGGCTGGTCTGGCTAGCTTGATCTCTCACGTCCCCT
TCGATGCTAGCGAGTCCAAGCGCATCGGTCTCTTCTCCTACGGCAGTGGT
CTTGCCAGCTCCCTGCTTAGCGTAAAGATTGTCGGAGACGTGTCCAACCT
GGTGGAGAAGCTCGATCTCAAGAACCGTCTTAGCAACCGCAACGTTCTCC
CTCCTCAGTCCTACGTTGACTGTGTCGACCAGAGCGAGCTTGAGAAATTC
GATGGCGTGAGCGAAGGCAAATACACCATTGGTCTTGGTCAGACCAAGAT
GAGCTTCTGTGATGACCGTGAAGATGGCTGCCCGTCCTCAGAACATTGGT
ATCAAGGCCATTGAGGTCTACTTCCCTCGTCAGATGTGTGCCCTCCGTGA
GCATGCTCACCTCAAGAAGAACTTCAAGCCTTCCGGCAACACCGAGACTC
TCTACCCTGGTACTTACTACTTGACTGAGGTGGACGATATGTTCCGCCGC
AAGTACGACGTCAAGGCATGAACATCTACTCCATTGCTTTGACCACCTTC
TCCTCCCTTCTCCGCAAGTACAACATCGACCCCAACTCCATTGGCCGCCT
GGAGGTCGGTACCGAGACCTTGCTGGACAAGTCCAAGTCCGTCAAGTCCG
TCCTGATGCAGCTTCTGGCTCCCCACGGAAACACCAACGTTGAGGGTGTT
GACAACGTCAATGCTTGCTACGGTGGCACCAACGCTGTTTTCAACAGCAT
CAACTGGCTCGAGTCCTCTGCCTGGGATGGCAGAGATGCCGTTGTTGTCT
GCGGTGACATTGCCCTGTACGCCGAGGGTGCTGCTCGCCCTACCGGTGGT
GCTGGCTGTGTCGCCATGCTGATCGGTCCTGACGCCCCTATTGTGTTCGA
GCCCGGTCTTCGTGCCTCCTACGTCACCCACGCCTACGACTTCTTCAAGC
CCGACCTGACCAGCGAGTACCCTGTCGTGGATGGTCACTTCTCCCTCAGA
TGCTACACTGAGGCTGTCGACGCTTGCTACAAGGCCTACAATGCTCGTGA
GAAGACCTTGAAGGAGAAGGTTCAGAACGGTACCAACGGCACCGCCCAGG
ACGACTCCAAGACTGCCTTGGACCGCTTCGACTACCTCTGCTACCATGCT
CCTACCTGCAAGCTGGTGCAGAAATCCTTCGCTCGTATGCTGTACAACGA
CTACCTCACAAACCCCACTCACCCTGCTTTCGCCGAAGTGGCTCCTGAGC
TCCGTGATTTGGACTACGCCACCTCTCTCACTGACAAGAACGTGGAGAAG
ACCTTCATGGGCCTGACCAAGAAGCGCTTCGCTGAGCGTGTTAAGCCCGC
TCTCGAGGTTGCCACTCTTTGCGGTAACATGTACACTGCCACCGTTTGGG
CTGGTCTGGCTAGCTTGATCTCTCACGTCCCCTTCGATGCTAGCGAGTCC
AAGCGCATCGGTCTCTTCTCCTACGGCAGTGGTCTTGCCAGCTCCCTGCT
TAGCGTAAAGATTGTCGGAGACGTGTCCAACCTGGTGGAGAAGCTCGATC
TCAAGAACCGTCTTAGCAACCGCAACGTTCTCCCTCCTCAGTCCTACGTT
GACTGTGTCGACCAGAGCGAGCTTGAGAAATTCGATGGCGTGAGCGAAGG
CAAATACACCATTGGTCTTGGTCAGACCAAGATGAGCTTCTGTGATGACC
GTGAAGATGGCTGCCCGTCCTCAGAACATTGGTATCAAGGCCATTGAGGT
CTACTTCCCTCGTCAGATGTGTGCCCTCCGTGAGCATGCTCACCTCAAGA
AGAACTTCAAGCCTTCCGGCAACACCGAGACTCTCTACCCTGGTACTTAC
TACTTGACTGAGGTGGACGATATGTTCCGCCGCAAGTACGACGTCAAGGC
ATGAACATCTACTCCATTGCTTTGACCACCTTCTCCTCCCTTCTCCGCAA
GTACAACATCGACCCCAACTCCATTGGCCGCCTGGAGGTCGGTACCGAGA
CCTTGCTGGACAAGTCCAAGTCCGTCAAGTCCGTCCTGATGCAGCTTCTG
GCTCCCCACGGAAACACCAACGTTGAGGGTGTTGACAACGTCAATGCTTG
CTACGGTGGCACCAACGCTGTTTTCAACAGCATCAACTGGCTCGAGTCCT
CTGCCTGGGATGGCAGAGATGCCGTTGTTGTCTGCGGTGACATTGCCCTG
TACGCCGAGGGTGCTGCTCGCCCTACCGGTGGTGCTGGCTGTGTCGCCAT
GCTGATCGGTCCTGACGCCCCTATTGTGTTCGAGCCCGGTCTTCGTGCCT
CCTACGTCACCCACGCCTACGACTTCTTCAAGCCCGACCTGACCAGCGAG
TACCCTGTCGTGGATGGTCACTTCTCCCTCAGATGCTACACTGAGGCTGT
CGACGCTTGCTACAAGGCCTACAATGCTCGTGAGAAGACCTTGAAGGAGA
AGGTTCAGAACGGTACCAACGGCACCGCCCAGGACGACTCCAAGACTGCC
TTGGACCGCTTCGACTACCTCTGCTACCATGCTCCTACCTGCAAGCTGGT
GCAGAAATCCTTCGCTCGTATGCTGTACAACGACTACCTCACAAACCCCA
CTCACCCTGCTTTCGCCGAAGTGGCTCCTGAGCTCCGTGATTTGGACTAC
GCCACCTCTCTCACTGACAAGAACGTGGAGAAGACCTTCATGGGCCTGAC
CAAGAAGCGCTTCGCTGAGCGTGTTAAGCCCGCTCTCGAGGTTGCCACTC
TTTGCGGTAACATGTACACTGCCACCGTTTGGGCTGGTCTGGCTAGCTTG
ATCTCTCACGTCCCCTTCGATGCTAGCGAGTCCAAGCGCATCGGTCTCTT
CTCCTACGGCAGTGGTCTTGCCAGCTCCCTGCTTAGCGTAAAGATTGTCG
GAGACGTGTCCAACCTGGTGGAGAAGCTCGATCTCAAGAACCGTCTTAGC
AACCGCAACGTTCTCCCTCCTCAGTCCTACGTTGACTGTGTCGACCAGAG
CGAGCTTGAGAAATTCGATGGCGTGAGCGAAGGCAAATACACCATTGGTC
TTGGTCAGACCAAGATGAGCTTCTGTGATGACCGTGAAGATGGCTGCCCG
TCCTCAGAACATTGGTATCAAGGCCATTGAGGTCTACTTCCCTCGTCAGA
TGTGTGCCCTCCGTGAGCATGCTCACCTCAAGAAGAACTTCAAGCCTTCC
GGCAACACCGAGACTCTCTACCCTGGTACTTACTACTTGACTGAGGTGGA
CGATATGTTCCGCCGCAAGTACGACGTCAAGGCATGAACATCTACTCCAT
TGCTTTGACCACCTTCTCCTCCCTTCTCCGCAAGTACAACATCGACCCCA
ACTCCATTGGCCGCCTGGAGGTCGGTACCGAGACCTTGCTGGACAAGTCC
AAGTCCGTCAAGTCCGTCCTGATGCAGCTTCTGGCTCCCCACGGAAACAC
CAACGTTGAGGGTGTTGACAACGTCAATGCTTGCTACGGTGGCACCAACG
CTGTTTTCAACAGCATCAACTGGCTCGAGTCCTCTGCCTGGGATGGCAGA
GATGCCGTTGTTGTCTGCGGTGACATTGCCCTGTACGCCGAGGGTGCTGC
TCGCCCTACCGGTGGTGCTGGCTGTGTCGCCATGCTGATCGGTCCTGACG
CCCCTATTGTGTTCGAGCCCGGTCTTCGTGCCTCCTACGTCACCCACGCC
TACGACTTCTTCAAGCCCGACCTGACCAGCGAGTACCCTGTCGTGGATGG
TCACTTCTCCCTCAGATGCTACACTGAGGCTGTCGACGCTTGCTACAAGG
CCTACAATGCTCGTGAGAAGACCTTGAAGGAGAAGGTTCAGAACGGTACC
AACGGCACCGCCCAGGACGACTCCAAGACTGCCTTGGACCGCTTCGACTA
CCTCTGCTACCATGCTCCTACCTGCAAGCTGGTGCAGAAATCCTTCGCTC
GTATGCTGTACAACGACTACCTCACAAACCCCACTCACCCTGCTTTCGCC
GAAGTGGCTCCTGAGCTCCGTGATTTGGACTACGCCACCTCTCTCACTGA
CAAGAACGTGGAGAAGACCTTCATGGGCCTGACCAAGAAGCGCTTCGCTG
AGCGTGTTAAGCCCGCTCTCGAGGTTGCCACTCTTTGCGGTAACATGTAC
ACTGCCACCGTTTGGGCTGGTCTGGCTAGCTTGATCTCTCACGTCCCCTT
CGATGCTAGCGAGTCCAAGCGCATCGGTCTCTTCTCCTACGGCAGTGGTC
TTGCCAGCTCCCTGCTTAGCGTAAAGATTGTCGGAGACGTGTCCAACCTG
GTGGAGAAGCTCGATCTCAAGAACCGTCTTAGCAACCGCAACGTTCTCCC
TCCTCAGTCCTACGTTGACTGTGTCGACCAGAGCGAGCTTGAGAAATTCG
ATGGCGTGAGCGAAGGCAAATACACCATTGGTCTTGGTCAGACCAAGATG
AGCTTCTGTGATGACCGTGAAGATGGCTGCCCGTCCTCAGAACATTGGTA
TCAAGGCCATTGAGGTCTACTTCCCTCGTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004421hydroxymethylglutaryl-CoA synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERG13ATCC64974_57630Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57630-T1ATCC64974_57630-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57630-T1.cdsATCC64974_57630-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57630-T1.exon4ATCC64974_57630-T1.exon4Aspergillus niger N402exon
ATCC64974_57630-T1.exon3ATCC64974_57630-T1.exon3Aspergillus niger N402exon
ATCC64974_57630-T1.exon2ATCC64974_57630-T1.exon2Aspergillus niger N402exon
ATCC64974_57630-T1.exon1ATCC64974_57630-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR000590
DBxrefInterPro:IPR013528
DBxrefInterPro:IPR013746
DBxrefInterPro:IPR016039
DBxrefInterPro:IPR010122
DBxrefPFAM:PF01154
DBxrefPFAM:PF08540
Product3-hydroxy-3-methylglutaryl coenzyme A synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4719844..4721446 -
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