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ATCC64974_57670-T1, ATCC64974_57670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57670-T1
Unique NameATCC64974_57670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4738258..4739313+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57670-T1 ID=ATCC64974_57670-T1|Name=ATCC64974_57670-T1|organism=Aspergillus niger N402|type=mRNA|length=1056bp|location=Sequence derived from alignment at OGUI01000007.1:4738258..4739313+ (Aspergillus niger N402)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCACGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4738258..4739313+

>ATCC64974_57670-T1 ID=ATCC64974_57670-T1|Name=ATCC64974_57670-T1|organism=Aspergillus niger N402|type=CDS|length=1056bp|location=Sequence derived from alignment at OGUI01000007.1:4738258..4739313+ (Aspergillus niger N402)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCACGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57670ATCC64974_57670Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57670-T1.exon1ATCC64974_57670-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57670-T1.cdsATCC64974_57670-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57670-T1ATCC64974_57670-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262PAY
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR023486
DBxrefInterPro:IPR013137
DBxrefInterPro:IPR013150
DBxrefInterPro:IPR013763
DBxrefInterPro:IPR000812
DBxrefPFAM:PF08271
DBxrefPFAM:PF00382
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4738258..4739313 +
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