You are here

Home

ATCC64974_58070-T1, ATCC64974_58070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_58070-T1
Unique NameATCC64974_58070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4872651..4873047-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_58070-T1 ID=ATCC64974_58070-T1|Name=ATCC64974_58070-T1|organism=Aspergillus niger N402|type=mRNA|length=397bp|location=Sequence derived from alignment at OGUI01000007.1:4872651..4873047- (Aspergillus niger N402)
ATGCCTCACCAATACATCGTTCGTTTGTCGGATGTTGTTCCTGCCCCTGG
GTAAATGCTAACGATTTTCATTTTTAGGTCAGCCTCAACAAGGAGTCTCC
CCCTGAGGAGCTTGAGAAGTGAGTCTTACCACGCTTCACTCATGCAAAGA
TTAGCTCTAATATTTGTATGTGATCAGGGCCAAGAAGACTGCCACCGACA
ACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGATTCGTGTAT
GTACCCTCTCCGCTGTCACGCAGCTTTTCGTATTCCTCAACTAATTCTTG
ATAATTTAGTGTCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCT
CCGACCACATCCACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4872651..4873047-

>ATCC64974_58070-T1 ID=ATCC64974_58070-T1|Name=ATCC64974_58070-T1|organism=Aspergillus niger N402|type=CDS|length=864bp|location=Sequence derived from alignment at OGUI01000007.1:4872651..4873047- (Aspergillus niger N402)
TGTCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCTCCGACCACA
TCCACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAAGGCCAAGAAGAC
TGCCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGG
GATTCGTGTCAGCCTCAACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAAT
GCCTCACCAATACATCTGTCCAATACGATGATGAGCAAGTCTCTACCCTC
GAGTCCTCCGACCACATCCACGTCGAGAAAGACAGCGAAGTCTCAATCCA
GTAAGGCCAAGAAGACTGCCACCGACAACGGAGGCAAGATCGTGAAGGAA
TTTGCGCTGGTCAAGGGATTCGTGTCAGCCTCAACAAGGAGTCTCCCCCT
GAGGAGCTTGAGAAATGCCTCACCAATACATCTGTCCAATACGATGATGA
GCAAGTCTCTACCCTCGAGTCCTCCGACCACATCCACGTCGAGAAAGACA
GCGAAGTCTCAATCCAGTAAGGCCAAGAAGACTGCCACCGACAACGGAGG
CAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGATTCGTGTCAGCCTCAA
CAAGGAGTCTCCCCCTGAGGAGCTTGAGAAATGCCTCACCAATACATCTG
TCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCTCCGACCACATC
CACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAAGGCCAAGAAGACTG
CCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGA
TTCGTGTCAGCCTCAACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAATGC
CTCACCAATACATC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_58070ATCC64974_58070Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58070-T1ATCC64974_58070-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58070-T1.cdsATCC64974_58070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58070-T1.exon4ATCC64974_58070-T1.exon4Aspergillus niger N402exon
ATCC64974_58070-T1.exon3ATCC64974_58070-T1.exon3Aspergillus niger N402exon
ATCC64974_58070-T1.exon2ATCC64974_58070-T1.exon2Aspergillus niger N402exon
ATCC64974_58070-T1.exon1ATCC64974_58070-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR010259
DBxrefInterPro:IPR037045
DBxrefPFAM:PF05922
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4872651..4873047 -
Powered by Drupal