You are here

Home

ATCC64974_58700-T1, ATCC64974_58700-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_58700-T1
Unique NameATCC64974_58700-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:5091297..5092792-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_58700-T1 ID=ATCC64974_58700-T1|Name=ATCC64974_58700-T1|organism=Aspergillus niger N402|type=mRNA|length=1496bp|location=Sequence derived from alignment at OGUI01000007.1:5091297..5092792- (Aspergillus niger N402)
ATGTCTTCTGCTCCTGACGGGCAACCAATGCTGCCTCTTCCTGGAGCCCC
GTCTTCTTCATGGTCCCGATTTCGTGAGAGATTCGGTGCACTATTTCATG
GCGCTGACCCCAGAGTCTGTGTTGCATTCTGGCTACTTGGTAAGCCGTTG
GCCGTCTTGTAGACACCGCGAACTGATAAGAACTACTCGTGGCTCACTGA
CCGGCATGCGTGACTCGCAACAGGATTGATCAACAATGTCCTCTATGTTA
TCATTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGC
GTCGTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGC
ACCCTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTG
TGCTATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTAT
ACAGATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAG
CTTGTCGAGCGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCT
ACGGCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGG
CTGGTCGGGGCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAG
TGTCAGGTCGACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTG
TGAGCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCT
GCACCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCT
GGATGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACA
AGAGGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAAC
CTGCAGCGAGCTAGGGGACTTTTCTTTCCCTTGTAAGTGCACGCTAGTAT
CATCAAGCAATAATTGGCATGCTTACATTTCCGCGCAGCATGCTCCCCCT
TCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAGGGGTTTCTCCGA
CCCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACATTATCGTGCATTT
TATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTTCATCTCGCGATC
GTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTCCGTCACTGCTGC
AAATCATCAATTTGGTCGTATTGACATTGCACGCCTTGTTTGACTTCATC
CCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGAAGGGCTATTAGG
GGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGGACCGGGTGCCGA
AGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTCAGCGATTCTGCC
GGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGAGGTCTGGTTGTG
TGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGAAACTATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:5091297..5092792-

>ATCC64974_58700-T1 ID=ATCC64974_58700-T1|Name=ATCC64974_58700-T1|organism=Aspergillus niger N402|type=CDS|length=4068bp|location=Sequence derived from alignment at OGUI01000007.1:5091297..5092792- (Aspergillus niger N402)
CATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAG
GGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACAT
TATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTT
CATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTC
CGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCACGCCTTG
TTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGA
AGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGG
ACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTC
AGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGA
GGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGA
AACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGTCCGCAG
CCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTCGTTCTTCTCGCA
GACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTTTATTCA
TTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTTCAGCCG
TGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGCGGTTCA
ATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAGCGGAGG
AGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACGGCCCGTTCAGTC
TGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGGGCTGGT
GCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGTCAGGTCGACACT
CCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGAGCTTCTTCGCCA
TTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTTGAGTAT
CGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCGGCACGG
TCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCGACGCGA
GTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGAGCTAGG
GGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCAATGCTG
CCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGAGAGATT
CGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCATTCTGGC
TACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCA
ACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTTT
GAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGG
TGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTT
ACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCAC
GCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTT
CTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAA
TCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACG
ACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGC
GTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATT
GCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGT
CCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTCGTTCTT
CTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTT
TATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTT
CAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGC
GGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAG
CGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACGGCCCGT
TCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGG
GCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGTCAGGTC
GACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGAGCTTCT
TCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTT
GAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCG
GCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCG
ACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGA
GCTAGGGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCA
ATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGA
GAGATTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCAT
TCTGGCTACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACA
CAATCAACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCG
CCGTTTGAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCA
GGTTGGTGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACG
ATCTTTACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACA
TTGCACGCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGT
CATCTTCTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCG
CCGAAATCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGA
GCGACGACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGG
AATGGCGTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGG
ATTATTGCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCA
TTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTC
GTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACC
CTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGC
TATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACA
GATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTT
GTCGAGCGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACG
GCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTG
GTCGGGGCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGT
CAGGTCGACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGA
GCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCA
CCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGA
TGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGA
GGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTG
CAGCGAGCTAGGGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGG
CAACCAATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATT
TCGTGAGAGATTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTG
TTGCATTCTGGCTACTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
BTN1ATCC64974_58700Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58700-T1ATCC64974_58700-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58700-T1.cdsATCC64974_58700-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58700-T1.exon3ATCC64974_58700-T1.exon3Aspergillus niger N402exon
ATCC64974_58700-T1.exon2ATCC64974_58700-T1.exon2Aspergillus niger N402exon
ATCC64974_58700-T1.exon1ATCC64974_58700-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263C1V
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR018460
DBxrefInterPro:IPR003492
DBxrefPFAM:PF02487
Productbattenin CLN3 protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:5091297..5092792 -
Powered by Drupal