You are here

Home

ATCC64974_58830-T1, ATCC64974_58830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_58830-T1
Unique NameATCC64974_58830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:15741..17319+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_58830-T1 ID=ATCC64974_58830-T1|Name=ATCC64974_58830-T1|organism=Aspergillus niger N402|type=mRNA|length=1579bp|location=Sequence derived from alignment at OGUI01000008.1:15741..17319+ (Aspergillus niger N402)
ATGGATAACGGCGACAAGCACAAGAATGCCTGGATCGAAGATGTCGCTGC
CAACGGTATATCGGACGTGATGGCCACCTACCGGGCGTACGACAGAGAAT
TTGCTCGAAAAACAGAGGTTGGACTGCGAAGGAAGATTGACCGTCGCATC
TTGCCGTTGGTGCTGCTCATATATCTGTTCAACTACCTGGATCGAAACTC
CATTACCCAGGCTCGTGTCTACGGGCTAGAGGAGGACACTCACCTAAAGG
GGGCCGAGTATCAGACCGTGATCTCCATTTTCTCGGTAGGATACATCTTA
ATGCAGATACCTTCAACTATGCTCATGACCAAGCTTCGACCTTCAGTCTA
CCTGGTATGTATCCCAGCCTCTCCTCGTAAATGCAGAGTCGGCAAACCCA
CTAAATAGAGAACAGCCAATGTGTATGATAGTCTGGGCCCTTATCAGCGG
CTGCACAGCAGCAACCAGCAACGTGGGCAGCATCATGGCTGTGCGCTTAC
TTCTGGGATTTGTCGAAGCGCCCTTTTTCCCGGGTGCAATATATTTCCTC
AGCTGTTGGTACACAAAAAAAGAACTTGGCGTTCGAACTGCCCTCCTTGT
TTCAGGAATTCTACTATCGAACGCTTTTGCCGGTTTAATATCTGCCGGGA
TTTTGACCGGAATGAGCCACGGCACCCGTCTTGCCTCCTGGCGCTGGCTC
TTCATCATCGAGGGCCTCGCTACCATTGCCGTTGCACTCATCGCCATGGC
CTTGCTCCCCGACTTTCCAGCTACAACAAAGTGGCTTACTGAAGCGGAGC
GTGTCGTCGCACAGGCCCGCCTCGCAACAGATGCAGGATCCGAATCTGCA
CCAGAAGAACAGAAAGTACCGCTCTCACAGGCCGTGGTCCGGGCGGCAAA
GGATGTGAGAACGTGGATCTTTGCGTGCATGCAAATGGCAACCACAGCTA
CCATATCATTCTCGCATTTCTTTCCTACCCTCATCAAAGGGATTGGCTTC
ACTAACAACACCAACGTTCTTCTTCTGACTTCTCCGCCCTATGTAGTTGG
GTTCTTTGGGGCCGTGGGATGGGGCTGGTGTGCGGACAGATGGCAGAATC
GTTTGGTCCCCGCTGGTATATCACTGAGCGCCGCAATTATCGCAACTATT
CTGCTCATTGCGGTACCAGAATACCTGAAGTGGGCGCATTACACCTTTAC
CTTCATGATCTGCTGTGGTACGTACGGCGTATATGCTACTACCTACGCCT
GGCTTTCTTCGACCATTGTTCAACCTCCTGCAAAGAGGGCCGCAGCGATC
GGGATGGCGAATACTTGTGCAAATATTGCAAGTTTGTTTGCGAATTACTT
TTGGCTGGATCAGTATGAGCCGACGTATCGGGTGAGCTGGGGCTGCATTC
TGGCGTTTGAGTGGTTAGGAATGGGATGTATCTTGGTTCTGAGAGTTTTG
TTGAACAGAGCGAATAGAAGGTTCGCGGAGTTGGCCGAAACCGTAGATTC
TAACGATGGATTGGCGATGCAGAGACTCGATCAGGACGAGCAGAGGGCTG
TTTTGAATGGGTTTAAGTATGTCATTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:15741..17319+

>ATCC64974_58830-T1 ID=ATCC64974_58830-T1|Name=ATCC64974_58830-T1|organism=Aspergillus niger N402|type=CDS|length=3036bp|location=Sequence derived from alignment at OGUI01000008.1:15741..17319+ (Aspergillus niger N402)
ATGGATAACGGCGACAAGCACAAGAATGCCTGGATCGAAGATGTCGCTGC
CAACGGTATATCGGACGTGATGGCCACCTACCGGGCGTACGACAGAGAAT
TTGCTCGAAAAACAGAGGTTGGACTGCGAAGGAAGATTGACCGTCGCATC
TTGCCGTTGGTGCTGCTCATATATCTGTTCAACTACCTGGATCGAAACTC
CATTACCCAGGCTCGTGTCTACGGGCTAGAGGAGGACACTCACCTAAAGG
GGGCCGAGTATCAGACCGTGATCTCCATTTTCTCGGTAGGATACATCTTA
ATGCAGATACCTTCAACTATGCTCATGACCAAGCTTCGACCTTCAGTCTA
CCTGCCAATGTGTATGATAGTCTGGGCCCTTATCAGCGGCTGCACAGCAG
CAACCAGCAACGTGGGCAGCATCATGGCTGTGCGCTTACTTCTGGGATTT
GTCGAAGCGCCCTTTTTCCCGGGTGCAATATATTTCCTCAGCTGTTGGTA
CACAAAAAAAGAACTTGGCGTTCGAACTGCCCTCCTTGTTTCAGGAATTC
TACTATCGAACGCTTTTGCCGGTTTAATATCTGCCGGGATTTTGACCGGA
ATGAGCCACGGCACCCGTCTTGCCTCCTGGCGCTGGCTCTTCATCATCGA
GGGCCTCGCTACCATTGCCGTTGCACTCATCGCCATGGCCTTGCTCCCCG
ACTTTCCAGCTACAACAAAGTGGCTTACTGAAGCGGAGCGTGTCGTCGCA
CAGGCCCGCCTCGCAACAGATGCAGGATCCGAATCTGCACCAGAAGAACA
GAAAGTACCGCTCTCACAGGCCGTGGTCCGGGCGGCAAAGGATGTGAGAA
CGTGGATCTTTGCGTGCATGCAAATGGCAACCACAGCTACCATATCATTC
TCGCATTTCTTTCCTACCCTCATCAAAGGGATTGGCTTCACTAACAACAC
CAACGTTCTTCTTCTGACTTCTCCGCCCTATGTAGTTGGGTTCTTTGGGG
CCGTGGGATGGGGCTGGTGTGCGGACAGATGGCAGAATCGTTTGGTCCCC
GCTGGTATATCACTGAGCGCCGCAATTATCGCAACTATTCTGCTCATTGC
GGTACCAGAATACCTGAAGTGGGCGCATTACACCTTTACCTTCATGATCT
GCTGTGGTACGTACGGCGTATATGCTACTACCTACGCCTGGCTTTCTTCG
ACCATTGTTCAACCTCCTGCAAAGAGGGCCGCAGCGATCGGGATGGCGAA
TACTTGTGCAAATATTGCAAGTTTGTTTGCGAATTACTTTTGGCTGGATC
AGTATGAGCCGACGTATCGGGTGAGCTGGGGCTGCATTCTGGCGTTTGAG
TGGTTAGGAATGGGATGTATCTTGGTTCTGAGAGTTTTGTTGAACAGAGC
GAATAGAAGGTTCGCGGAGTTGGCCGAAACCGTAGATTCTAACGATGGAT
TGGCGATGCAGAGACTCGATCAGGACGAGCAGAGGGCTGTTTTGAATGGG
TTTAAGTATGTCATTTGAATGGATAACGGCGACAAGCACAAGAATGCCTG
GATCGAAGATGTCGCTGCCAACGGTATATCGGACGTGATGGCCACCTACC
GGGCGTACGACAGAGAATTTGCTCGAAAAACAGAGGTTGGACTGCGAAGG
AAGATTGACCGTCGCATCTTGCCGTTGGTGCTGCTCATATATCTGTTCAA
CTACCTGGATCGAAACTCCATTACCCAGGCTCGTGTCTACGGGCTAGAGG
AGGACACTCACCTAAAGGGGGCCGAGTATCAGACCGTGATCTCCATTTTC
TCGGTAGGATACATCTTAATGCAGATACCTTCAACTATGCTCATGACCAA
GCTTCGACCTTCAGTCTACCTGCCAATGTGTATGATAGTCTGGGCCCTTA
TCAGCGGCTGCACAGCAGCAACCAGCAACGTGGGCAGCATCATGGCTGTG
CGCTTACTTCTGGGATTTGTCGAAGCGCCCTTTTTCCCGGGTGCAATATA
TTTCCTCAGCTGTTGGTACACAAAAAAAGAACTTGGCGTTCGAACTGCCC
TCCTTGTTTCAGGAATTCTACTATCGAACGCTTTTGCCGGTTTAATATCT
GCCGGGATTTTGACCGGAATGAGCCACGGCACCCGTCTTGCCTCCTGGCG
CTGGCTCTTCATCATCGAGGGCCTCGCTACCATTGCCGTTGCACTCATCG
CCATGGCCTTGCTCCCCGACTTTCCAGCTACAACAAAGTGGCTTACTGAA
GCGGAGCGTGTCGTCGCACAGGCCCGCCTCGCAACAGATGCAGGATCCGA
ATCTGCACCAGAAGAACAGAAAGTACCGCTCTCACAGGCCGTGGTCCGGG
CGGCAAAGGATGTGAGAACGTGGATCTTTGCGTGCATGCAAATGGCAACC
ACAGCTACCATATCATTCTCGCATTTCTTTCCTACCCTCATCAAAGGGAT
TGGCTTCACTAACAACACCAACGTTCTTCTTCTGACTTCTCCGCCCTATG
TAGTTGGGTTCTTTGGGGCCGTGGGATGGGGCTGGTGTGCGGACAGATGG
CAGAATCGTTTGGTCCCCGCTGGTATATCACTGAGCGCCGCAATTATCGC
AACTATTCTGCTCATTGCGGTACCAGAATACCTGAAGTGGGCGCATTACA
CCTTTACCTTCATGATCTGCTGTGGTACGTACGGCGTATATGCTACTACC
TACGCCTGGCTTTCTTCGACCATTGTTCAACCTCCTGCAAAGAGGGCCGC
AGCGATCGGGATGGCGAATACTTGTGCAAATATTGCAAGTTTGTTTGCGA
ATTACTTTTGGCTGGATCAGTATGAGCCGACGTATCGGGTGAGCTGGGGC
TGCATTCTGGCGTTTGAGTGGTTAGGAATGGGATGTATCTTGGTTCTGAG
AGTTTTGTTGAACAGAGCGAATAGAAGGTTCGCGGAGTTGGCCGAAACCG
TAGATTCTAACGATGGATTGGCGATGCAGAGACTCGATCAGGACGAGCAG
AGGGCTGTTTTGAATGGGTTTAAGTATGTCATTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_58830ATCC64974_58830Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58830-T1.exon1ATCC64974_58830-T1.exon1Aspergillus niger N402exon
ATCC64974_58830-T1.exon2ATCC64974_58830-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58830-T1.cdsATCC64974_58830-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58830-T1ATCC64974_58830-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:15741..17319 +
Powered by Drupal