You are here

Home

ATCC64974_58890-T1, ATCC64974_58890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_58890-T1
Unique NameATCC64974_58890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:39285..41636+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_58890-T1 ID=ATCC64974_58890-T1|Name=ATCC64974_58890-T1|organism=Aspergillus niger N402|type=mRNA|length=2352bp|location=Sequence derived from alignment at OGUI01000008.1:39285..41636+ (Aspergillus niger N402)
ATGGGCTCATCATTATCCTCGGTTTCCAATTCTTCTACCGAAGACATTGT
CATAGTAGGCGCTGGCGCCAGTGGCATAGCAGTGCTTCTTCGCTTGATCG
AACATGCTAAGGATGGCAAGAAGATTCCTCCCATCATCGTCGTTGAGAAA
GCTTCACCTCCTGGTCCAGGACTGGCATATTCTGCCGCTTGTACCGGGAC
CATCCTGAACATGCACACGGACACAATGGGTCTATATTATAACGACCCCA
AGCATTTTACGAGATGGAGAAGCGAGCTAGCCAGTGGTCCCTTCCCGTCC
CGAAGCCAATATGGAGAGTACCTGGAGGCGATGTGGTCCGAGATACTCTC
GCAAGCCCAACAGATGGGCTTGGACATCTCAATCATCCAAGACGAAGTAT
CCGACATTGACCGTCATGACGACAGTACCTTCACCTTGACACTGACAGGG
GGGCGTCGCCTTGCTGCCCAATCTGTCGTGTTGGCGCTGGGGAATTACAC
CTCCACTCTCAACACGCACCTGCTGAATCAACCGGGCTTCTTTCCCAGCC
CGTGGCCAACCTCTCAACTAAAGACCATTCCCGCCGATGCCTCGGTCCTC
ATCATCGGATCAAGGCTCTCCGCTGTTGACGCAGCGCTATTTCTCTCCAA
GAATGGCCACAAGGGCCCGTTGACCTTCATGTCGCGCAGTGGCCGCCTTC
CCAAAGTCCAGGGCGAGCCTGAGCCCTACCCGCGCCGTTACACCCTTCAC
ACCTTGGCCCGATACATCGAATCCAACCCAGCGGACGGTCTTGTCAAGCT
CACAACCACCCTTATGGATGAAATTGACGGAGTGAACAACGGAGATTGGA
CCTGGATACAGAAGCATGCCTCGCCGCTCGCTGAACTACGGGCAGACCTA
TTCGCGGCACAGGGAGGAAATGTCCATTGGCAAACCGTCCTCCGCCACAC
GGCCCCAGTAATCGAGCGTTACTGGCACTGTTTGCCTCTAGAAAGCCAGA
AGCTATTCATGGCCAAATTCTTCACTCCTTGGATGCGATATCGTCACGGA
ATGCCGGTGCAGAATGCGCAAAAGATACTCAACCTGATGGAAACCTCCCA
ACTTAGTGTCGTCGCAGGAGAGGCTGTCCACTGGGATGAGGGTGAGGGCG
CCTTCATCGCCCAGACTACCAGCGGGCCCATAGAAGCATCCTATGTCATC
GAAGCAACTGGACAAGAGAGTCATCTCGATCGCATCCCATCTCCGCTCGT
CCAGTCCGCTGTCCGAAAAGGATTATTCACCCCACACCCGATGGGTGGGG
TTGACGTCGACTTCCACACCCTCTGTACATCAACACCCGGCCTATACACT
ATGGGCTCGTTGACCCGCGGCACGCACTTCTACGTCAGCGCCATCGATCG
AACGGCTGCCCATGCGGCTCGCATCGCCGACGCACTGGTCGGGGAGCCCC
CTGCCAGACCTGTACATATCGCGATCTTTCTCGGTGCAGACGTGGCCTCG
CACCTGATAGCCAGTGACCTGGTCCCCCTGCTTCTGGCCGAGGGCCATAT
GCCTTTCCTCTTTTTGTCATCCAGCAAGCAGACACCTTCCTTAGAGGGGT
CTGATAGTCGACCTTTCGACCTGCGCAAACTGGAATTTTTCGAACGCGAG
CTTTTCCGCAAGCATCTCTGTCCAAGATTGAAGGAACACAGTTTCAAAGG
CGCACGGCACATGACCGTTGAGCAGATGCAGACGGCATACGGGGTCCTTG
TGCAAGAAATACCAGACACGAAGGGTGCCTCGGTCGGCAGAATGTTGCAA
AAATACTTCATCGACGTCGGCATATCACTGACATGCGCCGAGGCACCCGA
CCAGGATGTTATTGCTTACTTATCCTCTTCGTCGCGCCACCTTCTAGCAG
TGGATGCCGGCGTCCTCTCGGCTCCTTGGGACAGCAAGAAAGCTGGAGCC
AAGTTTGGGTATACCCTTCGTGAATTTCATGAAGACGGTAAGTTAGGAGA
CGTGATTGATCGCCGGACTATTCCCGTCGGGGAGTCCGCGGCCATGCTGA
CAGGTGTGGGCAAGGAGTATGCGCTTGGAGTGCAGATGGCTGTTGATGCA
ATTAAGCTGGTGAGTCGGGGAAAGCCTTTGAGCGACGTTGCTTGTCCTCG
ATCTAGCGATACTTCCCGCCATTGTTATTTGTCCGCGGAGGAGTTGTGGA
AATATTGTCATGAGAGAAGAATTGAACTGGTGGATGATAAGAGGGTTGTG
GAAATGCTGGTGGAGTCATTTGCCCCGCTGGAAAAGAGGGAGGTGCTGCG
AAAGGAGCTGGACGAGGCGGTGCAGGAATGGTATGTGAAGCAAGAGGTGT
GA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:39285..41636+

>ATCC64974_58890-T1 ID=ATCC64974_58890-T1|Name=ATCC64974_58890-T1|organism=Aspergillus niger N402|type=CDS|length=2352bp|location=Sequence derived from alignment at OGUI01000008.1:39285..41636+ (Aspergillus niger N402)
ATGGGCTCATCATTATCCTCGGTTTCCAATTCTTCTACCGAAGACATTGT
CATAGTAGGCGCTGGCGCCAGTGGCATAGCAGTGCTTCTTCGCTTGATCG
AACATGCTAAGGATGGCAAGAAGATTCCTCCCATCATCGTCGTTGAGAAA
GCTTCACCTCCTGGTCCAGGACTGGCATATTCTGCCGCTTGTACCGGGAC
CATCCTGAACATGCACACGGACACAATGGGTCTATATTATAACGACCCCA
AGCATTTTACGAGATGGAGAAGCGAGCTAGCCAGTGGTCCCTTCCCGTCC
CGAAGCCAATATGGAGAGTACCTGGAGGCGATGTGGTCCGAGATACTCTC
GCAAGCCCAACAGATGGGCTTGGACATCTCAATCATCCAAGACGAAGTAT
CCGACATTGACCGTCATGACGACAGTACCTTCACCTTGACACTGACAGGG
GGGCGTCGCCTTGCTGCCCAATCTGTCGTGTTGGCGCTGGGGAATTACAC
CTCCACTCTCAACACGCACCTGCTGAATCAACCGGGCTTCTTTCCCAGCC
CGTGGCCAACCTCTCAACTAAAGACCATTCCCGCCGATGCCTCGGTCCTC
ATCATCGGATCAAGGCTCTCCGCTGTTGACGCAGCGCTATTTCTCTCCAA
GAATGGCCACAAGGGCCCGTTGACCTTCATGTCGCGCAGTGGCCGCCTTC
CCAAAGTCCAGGGCGAGCCTGAGCCCTACCCGCGCCGTTACACCCTTCAC
ACCTTGGCCCGATACATCGAATCCAACCCAGCGGACGGTCTTGTCAAGCT
CACAACCACCCTTATGGATGAAATTGACGGAGTGAACAACGGAGATTGGA
CCTGGATACAGAAGCATGCCTCGCCGCTCGCTGAACTACGGGCAGACCTA
TTCGCGGCACAGGGAGGAAATGTCCATTGGCAAACCGTCCTCCGCCACAC
GGCCCCAGTAATCGAGCGTTACTGGCACTGTTTGCCTCTAGAAAGCCAGA
AGCTATTCATGGCCAAATTCTTCACTCCTTGGATGCGATATCGTCACGGA
ATGCCGGTGCAGAATGCGCAAAAGATACTCAACCTGATGGAAACCTCCCA
ACTTAGTGTCGTCGCAGGAGAGGCTGTCCACTGGGATGAGGGTGAGGGCG
CCTTCATCGCCCAGACTACCAGCGGGCCCATAGAAGCATCCTATGTCATC
GAAGCAACTGGACAAGAGAGTCATCTCGATCGCATCCCATCTCCGCTCGT
CCAGTCCGCTGTCCGAAAAGGATTATTCACCCCACACCCGATGGGTGGGG
TTGACGTCGACTTCCACACCCTCTGTACATCAACACCCGGCCTATACACT
ATGGGCTCGTTGACCCGCGGCACGCACTTCTACGTCAGCGCCATCGATCG
AACGGCTGCCCATGCGGCTCGCATCGCCGACGCACTGGTCGGGGAGCCCC
CTGCCAGACCTGTACATATCGCGATCTTTCTCGGTGCAGACGTGGCCTCG
CACCTGATAGCCAGTGACCTGGTCCCCCTGCTTCTGGCCGAGGGCCATAT
GCCTTTCCTCTTTTTGTCATCCAGCAAGCAGACACCTTCCTTAGAGGGGT
CTGATAGTCGACCTTTCGACCTGCGCAAACTGGAATTTTTCGAACGCGAG
CTTTTCCGCAAGCATCTCTGTCCAAGATTGAAGGAACACAGTTTCAAAGG
CGCACGGCACATGACCGTTGAGCAGATGCAGACGGCATACGGGGTCCTTG
TGCAAGAAATACCAGACACGAAGGGTGCCTCGGTCGGCAGAATGTTGCAA
AAATACTTCATCGACGTCGGCATATCACTGACATGCGCCGAGGCACCCGA
CCAGGATGTTATTGCTTACTTATCCTCTTCGTCGCGCCACCTTCTAGCAG
TGGATGCCGGCGTCCTCTCGGCTCCTTGGGACAGCAAGAAAGCTGGAGCC
AAGTTTGGGTATACCCTTCGTGAATTTCATGAAGACGGTAAGTTAGGAGA
CGTGATTGATCGCCGGACTATTCCCGTCGGGGAGTCCGCGGCCATGCTGA
CAGGTGTGGGCAAGGAGTATGCGCTTGGAGTGCAGATGGCTGTTGATGCA
ATTAAGCTGGTGAGTCGGGGAAAGCCTTTGAGCGACGTTGCTTGTCCTCG
ATCTAGCGATACTTCCCGCCATTGTTATTTGTCCGCGGAGGAGTTGTGGA
AATATTGTCATGAGAGAAGAATTGAACTGGTGGATGATAAGAGGGTTGTG
GAAATGCTGGTGGAGTCATTTGCCCCGCTGGAAAAGAGGGAGGTGCTGCG
AAAGGAGCTGGACGAGGCGGTGCAGGAATGGTATGTGAAGCAAGAGGTGT
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_58890ATCC64974_58890Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58890-T1.exon1ATCC64974_58890-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58890-T1.cdsATCC64974_58890-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_58890-T1ATCC64974_58890-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR038732
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF13454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:39285..41636 +
Powered by Drupal