You are here

Home

ATCC64974_59170-T1, ATCC64974_59170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_59170-T1
Unique NameATCC64974_59170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:108361..110221-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_59170-T1 ID=ATCC64974_59170-T1|Name=ATCC64974_59170-T1|organism=Aspergillus niger N402|type=mRNA|length=1861bp|location=Sequence derived from alignment at OGUI01000008.1:108361..110221- (Aspergillus niger N402)
ATGCCTTCCTTTGCCTCTTGGCTCCTCACCTCCGGGTTGGCCGCCGTGGC
CAGCGCCATCACTGCCAATGACAGCCTCGTGGCCCGGCAGATTGATACCC
AACCTTTCCCCTATGACTTCCCCCAGTTGGGCGTCAATGGTTCCGATCTC
TTTCCCATGCGGGACTGCCATGGCTTCACCTTGGAGGAGGCCAGCATCGA
TGAGATCCAGGCGCAGCTGAAGGCCGGTCGCTTCACCGGCTCCCAGCTGC
TGCAGTGCTACCTCGAGCGCATCTACCAGGTCCAGCCCTACACCAAGTAA
GTTGCCCTTCTTCTCACAAAAATGCGGTTCGCTGATTCTGGTGTTCCAGT
GCGGTGCTGCAGTTCAACCCCGACGCCATGGCCATTGCCGAGGCGTTGGA
TGCCGAACGCAAGCAGGGTACCGTGCGCGGTCCCCTGCACGGCATCCCCT
TCCTGGTCAAGGACAACATCGCCAGTAAGGACAAGATGGAGACCACCGCG
GGCAGCTGGGCCCTCGTCGGCTCCGTCGTCCCTCGCGATTCTCACGTCGT
GCATCGTCTGCGCCAGGCGGGTGCGGTCCTGCTGGGCAAGGCCACACTCA
GTGAGTGGGCGGACATGCGCTCCAACGACTACTCCGAGGGCTACTCGGGC
CGTGGTGGCCAGTGCCGCAACCCCTACAACTTCACCGTCAACCCCGGTGG
CAGTAGCTCCGGTTCCGGTGTGGCTGTCACGAGCAACCAGGTGCCTTTTG
CTCTGGGTACCGAGACGGATGGTAGTGGTAAGTTTGGCAGACCAAAAATA
TGATGACACAAATATGCTAATGTGGAGGACCAGTGATCAACCCGGCCGAG
CGTTCGAACGTGGTCGGTATCAAGCCCACCGTGGGTCTGACCTCCCGGGC
GGGTGTCATCCCCGAGTCCCTGCACCAGGACACGGTCGGCACCTTTGGCA
AGACGGTGCGCGATGCCGCCTATGCGCTGGATGCCATCTACGGCATTGAC
CCCCGCGACAACGAGACCTATGCCCAGCAGGGCAAGACCCCGGCGGGCGG
GTACGCCCAGTTCCTGACCAACCAGACGGCGCTGAAGGGGGCGGTGTTCG
GTCTCCCCTGGTTGTCCTTCTGGCAGTACAACGACGCCGCACAGAACGCC
CAGCTGATGGAACTGCTGGCGCTGATCGAGGCGGCGGGAGCCACCATCAT
CAACGGCACGGAGCTGCCGCACTACAAGGAGATTGTGGACCCGTCCGGCT
GGAACTGGGACTACGGCACCACGCGCGGCTACCCCAACCAGTCCGAGTAC
TCTTACGTCAAGGTGGATTTCTACAACAACATCCGGGACTACCTGGCGGA
GCTCAACAACACCAACATGCGGTCGTTGGAGGATCTGGTGCAGTACAACC
TCGACAATGCGGGCAGTGAGGGCGGTGTTCCGGGCGTCAACCCGGCGTTT
GCCTCAGGCCAAGACGGATTCCTGGCCTCGCTGGCCACCAAGGGCGAGAT
GAACGAGACCTACTGGCAGGCGCTGGAGTATTGCCACCGCACGTCTCGGG
AGGAGGGGATCGATGCGGCCCTGCACTACCAGGGTCGGAACCTCACGGCG
CTGCTGGTGCCTCCGGACTTTGCCCCCTCGATCGAGATTGCCGCGCAGGC
GGGTTACCCGGTGGTGACGCTGCCCGCGGGGATCAACCAGGACTCGCATA
TGCCCTACGGACTGGCGCTGATGGGCACGGCGTTCTCCGAGGCCACGCTG
ATCAAGTATGCCAGCGCCATCGAGGACCTGCAGCTGTCGTCCAACACGCC
GTGGAAGCGCAGCCTGGCCACGTGGAGCGGCTACCTGGACCGAAACATTC
CGGTGAACTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:108361..110221-

>ATCC64974_59170-T1 ID=ATCC64974_59170-T1|Name=ATCC64974_59170-T1|organism=Aspergillus niger N402|type=CDS|length=5256bp|location=Sequence derived from alignment at OGUI01000008.1:108361..110221- (Aspergillus niger N402)
TGATCAACCCGGCCGAGCGTTCGAACGTGGTCGGTATCAAGCCCACCGTG
GGTCTGACCTCCCGGGCGGGTGTCATCCCCGAGTCCCTGCACCAGGACAC
GGTCGGCACCTTTGGCAAGACGGTGCGCGATGCCGCCTATGCGCTGGATG
CCATCTACGGCATTGACCCCCGCGACAACGAGACCTATGCCCAGCAGGGC
AAGACCCCGGCGGGCGGGTACGCCCAGTTCCTGACCAACCAGACGGCGCT
GAAGGGGGCGGTGTTCGGTCTCCCCTGGTTGTCCTTCTGGCAGTACAACG
ACGCCGCACAGAACGCCCAGCTGATGGAACTGCTGGCGCTGATCGAGGCG
GCGGGAGCCACCATCATCAACGGCACGGAGCTGCCGCACTACAAGGAGAT
TGTGGACCCGTCCGGCTGGAACTGGGACTACGGCACCACGCGCGGCTACC
CCAACCAGTCCGAGTACTCTTACGTCAAGGTGGATTTCTACAACAACATC
CGGGACTACCTGGCGGAGCTCAACAACACCAACATGCGGTCGTTGGAGGA
TCTGGTGCAGTACAACCTCGACAATGCGGGCAGTGAGGGCGGTGTTCCGG
GCGTCAACCCGGCGTTTGCCTCAGGCCAAGACGGATTCCTGGCCTCGCTG
GCCACCAAGGGCGAGATGAACGAGACCTACTGGCAGGCGCTGGAGTATTG
CCACCGCACGTCTCGGGAGGAGGGGATCGATGCGGCCCTGCACTACCAGG
GTCGGAACCTCACGGCGCTGCTGGTGCCTCCGGACTTTGCCCCCTCGATC
GAGATTGCCGCGCAGGCGGGTTACCCGGTGGTGACGCTGCCCGCGGGGAT
CAACCAGGACTCGCATATGCCCTACGGACTGGCGCTGATGGGCACGGCGT
TCTCCGAGGCCACGCTGATCAAGTATGCCAGCGCCATCGAGGACCTGCAG
CTGTCGTCCAACACGCCGTGGAAGCGCAGCCTGGCCACGTGGAGCGGCTA
CCTGGACCGAAACATTCCGGTGAACTAATGCGGTGCTGCAGTTCAACCCC
GACGCCATGGCCATTGCCGAGGCGTTGGATGCCGAACGCAAGCAGGGTAC
CGTGCGCGGTCCCCTGCACGGCATCCCCTTCCTGGTCAAGGACAACATCG
CCAGTAAGGACAAGATGGAGACCACCGCGGGCAGCTGGGCCCTCGTCGGC
TCCGTCGTCCCTCGCGATTCTCACGTCGTGCATCGTCTGCGCCAGGCGGG
TGCGGTCCTGCTGGGCAAGGCCACACTCAGTGAGTGGGCGGACATGCGCT
CCAACGACTACTCCGAGGGCTACTCGGGCCGTGGTGGCCAGTGCCGCAAC
CCCTACAACTTCACCGTCAACCCCGGTGGCAGTAGCTCCGGTTCCGGTGT
GGCTGTCACGAGCAACCAGGTGCCTTTTGCTCTGGGTACCGAGACGGATG
GTAGTGATGCCTTCCTTTGCCTCTTGGCTCCTCACCTCCGGGTTGGCCGC
CGTGGCCAGCGCCATCACTGCCAATGACAGCCTCGTGGCCCGGCAGATTG
ATACCCAACCTTTCCCCTATGACTTCCCCCAGTTGGGCGTCAATGGTTCC
GATCTCTTTCCCATGCGGGACTGCCATGGCTTCACCTTGGAGGAGGCCAG
CATCGATGAGATCCAGGCGCAGCTGAAGGCCGGTCGCTTCACCGGCTCCC
AGCTGCTGCAGTGCTACCTCGAGCGCATCTACCAGGTCCAGCCCTACACC
AATGATCAACCCGGCCGAGCGTTCGAACGTGGTCGGTATCAAGCCCACCG
TGGGTCTGACCTCCCGGGCGGGTGTCATCCCCGAGTCCCTGCACCAGGAC
ACGGTCGGCACCTTTGGCAAGACGGTGCGCGATGCCGCCTATGCGCTGGA
TGCCATCTACGGCATTGACCCCCGCGACAACGAGACCTATGCCCAGCAGG
GCAAGACCCCGGCGGGCGGGTACGCCCAGTTCCTGACCAACCAGACGGCG
CTGAAGGGGGCGGTGTTCGGTCTCCCCTGGTTGTCCTTCTGGCAGTACAA
CGACGCCGCACAGAACGCCCAGCTGATGGAACTGCTGGCGCTGATCGAGG
CGGCGGGAGCCACCATCATCAACGGCACGGAGCTGCCGCACTACAAGGAG
ATTGTGGACCCGTCCGGCTGGAACTGGGACTACGGCACCACGCGCGGCTA
CCCCAACCAGTCCGAGTACTCTTACGTCAAGGTGGATTTCTACAACAACA
TCCGGGACTACCTGGCGGAGCTCAACAACACCAACATGCGGTCGTTGGAG
GATCTGGTGCAGTACAACCTCGACAATGCGGGCAGTGAGGGCGGTGTTCC
GGGCGTCAACCCGGCGTTTGCCTCAGGCCAAGACGGATTCCTGGCCTCGC
TGGCCACCAAGGGCGAGATGAACGAGACCTACTGGCAGGCGCTGGAGTAT
TGCCACCGCACGTCTCGGGAGGAGGGGATCGATGCGGCCCTGCACTACCA
GGGTCGGAACCTCACGGCGCTGCTGGTGCCTCCGGACTTTGCCCCCTCGA
TCGAGATTGCCGCGCAGGCGGGTTACCCGGTGGTGACGCTGCCCGCGGGG
ATCAACCAGGACTCGCATATGCCCTACGGACTGGCGCTGATGGGCACGGC
GTTCTCCGAGGCCACGCTGATCAAGTATGCCAGCGCCATCGAGGACCTGC
AGCTGTCGTCCAACACGCCGTGGAAGCGCAGCCTGGCCACGTGGAGCGGC
TACCTGGACCGAAACATTCCGGTGAACTAATGCGGTGCTGCAGTTCAACC
CCGACGCCATGGCCATTGCCGAGGCGTTGGATGCCGAACGCAAGCAGGGT
ACCGTGCGCGGTCCCCTGCACGGCATCCCCTTCCTGGTCAAGGACAACAT
CGCCAGTAAGGACAAGATGGAGACCACCGCGGGCAGCTGGGCCCTCGTCG
GCTCCGTCGTCCCTCGCGATTCTCACGTCGTGCATCGTCTGCGCCAGGCG
GGTGCGGTCCTGCTGGGCAAGGCCACACTCAGTGAGTGGGCGGACATGCG
CTCCAACGACTACTCCGAGGGCTACTCGGGCCGTGGTGGCCAGTGCCGCA
ACCCCTACAACTTCACCGTCAACCCCGGTGGCAGTAGCTCCGGTTCCGGT
GTGGCTGTCACGAGCAACCAGGTGCCTTTTGCTCTGGGTACCGAGACGGA
TGGTAGTGATGCCTTCCTTTGCCTCTTGGCTCCTCACCTCCGGGTTGGCC
GCCGTGGCCAGCGCCATCACTGCCAATGACAGCCTCGTGGCCCGGCAGAT
TGATACCCAACCTTTCCCCTATGACTTCCCCCAGTTGGGCGTCAATGGTT
CCGATCTCTTTCCCATGCGGGACTGCCATGGCTTCACCTTGGAGGAGGCC
AGCATCGATGAGATCCAGGCGCAGCTGAAGGCCGGTCGCTTCACCGGCTC
CCAGCTGCTGCAGTGCTACCTCGAGCGCATCTACCAGGTCCAGCCCTACA
CCAATGATCAACCCGGCCGAGCGTTCGAACGTGGTCGGTATCAAGCCCAC
CGTGGGTCTGACCTCCCGGGCGGGTGTCATCCCCGAGTCCCTGCACCAGG
ACACGGTCGGCACCTTTGGCAAGACGGTGCGCGATGCCGCCTATGCGCTG
GATGCCATCTACGGCATTGACCCCCGCGACAACGAGACCTATGCCCAGCA
GGGCAAGACCCCGGCGGGCGGGTACGCCCAGTTCCTGACCAACCAGACGG
CGCTGAAGGGGGCGGTGTTCGGTCTCCCCTGGTTGTCCTTCTGGCAGTAC
AACGACGCCGCACAGAACGCCCAGCTGATGGAACTGCTGGCGCTGATCGA
GGCGGCGGGAGCCACCATCATCAACGGCACGGAGCTGCCGCACTACAAGG
AGATTGTGGACCCGTCCGGCTGGAACTGGGACTACGGCACCACGCGCGGC
TACCCCAACCAGTCCGAGTACTCTTACGTCAAGGTGGATTTCTACAACAA
CATCCGGGACTACCTGGCGGAGCTCAACAACACCAACATGCGGTCGTTGG
AGGATCTGGTGCAGTACAACCTCGACAATGCGGGCAGTGAGGGCGGTGTT
CCGGGCGTCAACCCGGCGTTTGCCTCAGGCCAAGACGGATTCCTGGCCTC
GCTGGCCACCAAGGGCGAGATGAACGAGACCTACTGGCAGGCGCTGGAGT
ATTGCCACCGCACGTCTCGGGAGGAGGGGATCGATGCGGCCCTGCACTAC
CAGGGTCGGAACCTCACGGCGCTGCTGGTGCCTCCGGACTTTGCCCCCTC
GATCGAGATTGCCGCGCAGGCGGGTTACCCGGTGGTGACGCTGCCCGCGG
GGATCAACCAGGACTCGCATATGCCCTACGGACTGGCGCTGATGGGCACG
GCGTTCTCCGAGGCCACGCTGATCAAGTATGCCAGCGCCATCGAGGACCT
GCAGCTGTCGTCCAACACGCCGTGGAAGCGCAGCCTGGCCACGTGGAGCG
GCTACCTGGACCGAAACATTCCGGTGAACTAATGCGGTGCTGCAGTTCAA
CCCCGACGCCATGGCCATTGCCGAGGCGTTGGATGCCGAACGCAAGCAGG
GTACCGTGCGCGGTCCCCTGCACGGCATCCCCTTCCTGGTCAAGGACAAC
ATCGCCAGTAAGGACAAGATGGAGACCACCGCGGGCAGCTGGGCCCTCGT
CGGCTCCGTCGTCCCTCGCGATTCTCACGTCGTGCATCGTCTGCGCCAGG
CGGGTGCGGTCCTGCTGGGCAAGGCCACACTCAGTGAGTGGGCGGACATG
CGCTCCAACGACTACTCCGAGGGCTACTCGGGCCGTGGTGGCCAGTGCCG
CAACCCCTACAACTTCACCGTCAACCCCGGTGGCAGTAGCTCCGGTTCCG
GTGTGGCTGTCACGAGCAACCAGGTGCCTTTTGCTCTGGGTACCGAGACG
GATGGTAGTGATGCCTTCCTTTGCCTCTTGGCTCCTCACCTCCGGGTTGG
CCGCCGTGGCCAGCGCCATCACTGCCAATGACAGCCTCGTGGCCCGGCAG
ATTGATACCCAACCTTTCCCCTATGACTTCCCCCAGTTGGGCGTCAATGG
TTCCGATCTCTTTCCCATGCGGGACTGCCATGGCTTCACCTTGGAGGAGG
CCAGCATCGATGAGATCCAGGCGCAGCTGAAGGCCGGTCGCTTCACCGGC
TCCCAGCTGCTGCAGTGCTACCTCGAGCGCATCTACCAGGTCCAGCCCTA
CACCAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_59170ATCC64974_59170Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59170-T1ATCC64974_59170-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59170-T1.cdsATCC64974_59170-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59170-T1.exon3ATCC64974_59170-T1.exon3Aspergillus niger N402exon
ATCC64974_59170-T1.exon2ATCC64974_59170-T1.exon2Aspergillus niger N402exon
ATCC64974_59170-T1.exon1ATCC64974_59170-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.1
NoteSECRETED:SignalP(1-19)
NoteSMCOG1105:amidase
DBxrefInterPro:IPR023631
DBxrefInterPro:IPR036928
DBxrefPFAM:PF01425
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:108361..110221 -
Powered by Drupal