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ATCC64974_59200-T1, ATCC64974_59200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_59200-T1
Unique NameATCC64974_59200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:120344..121203-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_59200-T1 ID=ATCC64974_59200-T1|Name=ATCC64974_59200-T1|organism=Aspergillus niger N402|type=mRNA|length=860bp|location=Sequence derived from alignment at OGUI01000008.1:120344..121203- (Aspergillus niger N402)
ATGCATTCCCCAACCTCTACTACAACCCAGCGCAGCCTAGCTGCCAATCT
CCATGGCAAGACAGCTATCGTCACTGGATCTTCCAGGTACATATGTCATG
TCTCAAGCGAGTGGTATCGACTGATATAATAGTAGAGGCATCGGTGCTGG
CATCGCCCTGGAGCTGGGTCGTCGCGGGGCGGCGGTGATCATCACATATA
CATCCGAGCGGTCTAAAGCTGCAGCGCAGAGTGTTGTGGAAGCTATCGTG
AAGGCCTCCTCTGGTGGTCAGGGTGTCTTGGTGCAGGCGAACATTACTTC
TGCTACTGATCGCCAAACTCTCATTGATACTGCAGTGCAAGCGAGTCCGA
CGGGTCACATCGATATGCTGGTCCACAATGCGGCGGATGGGGAAGACAGT
TCGCTCGAGGATGTGACTGAGGAGTTGTTTGAACGATTGATGGCAGTTAA
CCTAAAGGGTAGTTGAAACTCCGGAATAACTGAGACACCTTGATGGATGG
ATGGATTGGTTAACTTATGCCGCAGCTCCGTTGTTCCTTACCCAGTCTGC
GGTGCCATATATGCCCCGTGGTGGACGCATCATTCTCATCACCTCGGCTG
CGGCTCGCATGGGCGTCGCCCAGACCAGCGTCTATGCTGCCAGTAAGGCT
GGTATGGAGGCGCTGGTACGCGTCTGGGCTACGGAACTGGGCCAGACTCA
TGGTATCACGGTTAACGCGGTCAGTCCGGGACCCATCGCGACGGAGCAAT
TTCAGAACAGTGCTCCTGAGTTCAAAGAGGCTATGCAGTCCATGATTCAG
GCTACTCCCGCCGAGGCCCGTATGGGAGAGGTGGAGGATATTGTCTCGTT
GGTCAGGTGA
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Coding sequence (CDS) from alignment at OGUI01000008.1:120344..121203-

>ATCC64974_59200-T1 ID=ATCC64974_59200-T1|Name=ATCC64974_59200-T1|organism=Aspergillus niger N402|type=CDS|length=2232bp|location=Sequence derived from alignment at OGUI01000008.1:120344..121203- (Aspergillus niger N402)
CTCCGTTGTTCCTTACCCAGTCTGCGGTGCCATATATGCCCCGTGGTGGA
CGCATCATTCTCATCACCTCGGCTGCGGCTCGCATGGGCGTCGCCCAGAC
CAGCGTCTATGCTGCCAGTAAGGCTGGTATGGAGGCGCTGGTACGCGTCT
GGGCTACGGAACTGGGCCAGACTCATGGTATCACGGTTAACGCGGTCAGT
CCGGGACCCATCGCGACGGAGCAATTTCAGAACAGTGCTCCTGAGTTCAA
AGAGGCTATGCAGTCCATGATTCAGGCTACTCCCGCCGAGGCCCGTATGG
GAGAGGTGGAGGATATTGTCTCGTTGGTCAGGTGAAGGCATCGGTGCTGG
CATCGCCCTGGAGCTGGGTCGTCGCGGGGCGGCGGTGATCATCACATATA
CATCCGAGCGGTCTAAAGCTGCAGCGCAGAGTGTTGTGGAAGCTATCGTG
AAGGCCTCCTCTGGTGGTCAGGGTGTCTTGGTGCAGGCGAACATTACTTC
TGCTACTGATCGCCAAACTCTCATTGATACTGCAGTGCAAGCGAGTCCGA
CGGGTCACATCGATATGCTGGTCCACAATGCGGCGGATGGGGAAGACAGT
TCGCTCGAGGATGTGACTGAGGAGTTGTTTGAACGATTGATGGCAGTTAA
CCTAAAGGATGCATTCCCCAACCTCTACTACAACCCAGCGCAGCCTAGCT
GCCAATCTCCATGGCAAGACAGCTATCGTCACTGGATCTTCCAGCTCCGT
TGTTCCTTACCCAGTCTGCGGTGCCATATATGCCCCGTGGTGGACGCATC
ATTCTCATCACCTCGGCTGCGGCTCGCATGGGCGTCGCCCAGACCAGCGT
CTATGCTGCCAGTAAGGCTGGTATGGAGGCGCTGGTACGCGTCTGGGCTA
CGGAACTGGGCCAGACTCATGGTATCACGGTTAACGCGGTCAGTCCGGGA
CCCATCGCGACGGAGCAATTTCAGAACAGTGCTCCTGAGTTCAAAGAGGC
TATGCAGTCCATGATTCAGGCTACTCCCGCCGAGGCCCGTATGGGAGAGG
TGGAGGATATTGTCTCGTTGGTCAGGTGAAGGCATCGGTGCTGGCATCGC
CCTGGAGCTGGGTCGTCGCGGGGCGGCGGTGATCATCACATATACATCCG
AGCGGTCTAAAGCTGCAGCGCAGAGTGTTGTGGAAGCTATCGTGAAGGCC
TCCTCTGGTGGTCAGGGTGTCTTGGTGCAGGCGAACATTACTTCTGCTAC
TGATCGCCAAACTCTCATTGATACTGCAGTGCAAGCGAGTCCGACGGGTC
ACATCGATATGCTGGTCCACAATGCGGCGGATGGGGAAGACAGTTCGCTC
GAGGATGTGACTGAGGAGTTGTTTGAACGATTGATGGCAGTTAACCTAAA
GGATGCATTCCCCAACCTCTACTACAACCCAGCGCAGCCTAGCTGCCAAT
CTCCATGGCAAGACAGCTATCGTCACTGGATCTTCCAGCTCCGTTGTTCC
TTACCCAGTCTGCGGTGCCATATATGCCCCGTGGTGGACGCATCATTCTC
ATCACCTCGGCTGCGGCTCGCATGGGCGTCGCCCAGACCAGCGTCTATGC
TGCCAGTAAGGCTGGTATGGAGGCGCTGGTACGCGTCTGGGCTACGGAAC
TGGGCCAGACTCATGGTATCACGGTTAACGCGGTCAGTCCGGGACCCATC
GCGACGGAGCAATTTCAGAACAGTGCTCCTGAGTTCAAAGAGGCTATGCA
GTCCATGATTCAGGCTACTCCCGCCGAGGCCCGTATGGGAGAGGTGGAGG
ATATTGTCTCGTTGGTCAGGTGAAGGCATCGGTGCTGGCATCGCCCTGGA
GCTGGGTCGTCGCGGGGCGGCGGTGATCATCACATATACATCCGAGCGGT
CTAAAGCTGCAGCGCAGAGTGTTGTGGAAGCTATCGTGAAGGCCTCCTCT
GGTGGTCAGGGTGTCTTGGTGCAGGCGAACATTACTTCTGCTACTGATCG
CCAAACTCTCATTGATACTGCAGTGCAAGCGAGTCCGACGGGTCACATCG
ATATGCTGGTCCACAATGCGGCGGATGGGGAAGACAGTTCGCTCGAGGAT
GTGACTGAGGAGTTGTTTGAACGATTGATGGCAGTTAACCTAAAGGATGC
ATTCCCCAACCTCTACTACAACCCAGCGCAGCCTAGCTGCCAATCTCCAT
GGCAAGACAGCTATCGTCACTGGATCTTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_59200ATCC64974_59200Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59200-T1ATCC64974_59200-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59200-T1.cdsATCC64974_59200-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59200-T1.exon3ATCC64974_59200-T1.exon3Aspergillus niger N402exon
ATCC64974_59200-T1.exon2ATCC64974_59200-T1.exon2Aspergillus niger N402exon
ATCC64974_59200-T1.exon1ATCC64974_59200-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.1
NoteEggNog:ENOG41
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:120344..121203 -
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