You are here

Home

ATCC64974_59730-T1, ATCC64974_59730-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_59730-T1
Unique NameATCC64974_59730-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:273388..274031-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_59730-T1 ID=ATCC64974_59730-T1|Name=ATCC64974_59730-T1|organism=Aspergillus niger N402|type=mRNA|length=644bp|location=Sequence derived from alignment at OGUI01000008.1:273388..274031- (Aspergillus niger N402)
ATGCAATCCTACCCTGGTTCCTGCTTCTGTCACAAAATCACCTATAACCT
CAACCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCA
GCTGCAAGGTTAGCCAGATAGCTCCACGGTTCTGATCTACGATCTACACC
TAAACTTTGTCCACAAGGTGTTCAATTGACTAACACCTTTCGGGGTTATA
GAAAGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAAAGATG
CCCTTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATAATGGG
TCTGGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGCTATAT
TTGCGAGTATGGGGTATGTTCGTTCGCTCTAAGGGGGCTCGTTTGTGGGA
GTGGCATAAGTGCTCTGCTAATGGGTCTTGGACAGGATGCTGTCAAGAAT
GATTTCCGGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCC
GCCGAAGGGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGA
TTCCGGGTGAGTGTCTGGTCTGTCTTGTCTTCATGGTGCGCAATAACTAA
TTTGGTTCGTAGATGTTTTTCACAAAAGCAAGATCAAGGAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:273388..274031-

>ATCC64974_59730-T1 ID=ATCC64974_59730-T1|Name=ATCC64974_59730-T1|organism=Aspergillus niger N402|type=CDS|length=1692bp|location=Sequence derived from alignment at OGUI01000008.1:273388..274031- (Aspergillus niger N402)
ATGTTTTTCACAAAAGCAAGATCAAGGAGTAAGATGCTGTCAAGAATGAT
TTCCGGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCCGCC
GAAGGGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGATTC
CGGAAAGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAAAGA
TGCCCTTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATAATG
GGTCTGGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGCTAT
ATTTGCGAGTATGGGATGCAATCCTACCCTGGTTCCTGCTTCTGTCACAA
AATCACCTATAACCTCAACCTCTCGTCTCCCGACGATGCCCGCACGTCCC
TCTGCCATTGCAGCAGCTGCAAGATGTTTTTCACAAAAGCAAGATCAAGG
AGTAAGATGCTGTCAAGAATGATTTCCGGTATATTTGTGTAGGGACATTG
GATGATCCGGAAGTGTTGCCGCCGAAGGGAGAGTTTTTCTGTCAGAGTAG
GGTTCGTTGGATGCCGGAGATTCCGGAAAGCTTTCGGAACAAACTACGGT
CTAACCGCCAAGGTCCCCAAAGATGCCCTTCAGATCACATCCGGTAAGCT
TAAGGAATACGTGGGTGATAATGGGTCTGGAAGTATGATACATCGGGAGT
TTTGTGGCGATTGTGGGAGCTATATTTGCGAGTATGGGATGCAATCCTAC
CCTGGTTCCTGCTTCTGTCACAAAATCACCTATAACCTCAACCTCTCGTC
TCCCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCAGCTGCAAGATGT
TTTTCACAAAAGCAAGATCAAGGAGTAAGATGCTGTCAAGAATGATTTCC
GGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCCGCCGAAG
GGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGATTCCGGA
AAGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAAAGATGCC
CTTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATAATGGGTC
TGGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGCTATATTT
GCGAGTATGGGATGCAATCCTACCCTGGTTCCTGCTTCTGTCACAAAATC
ACCTATAACCTCAACCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCTG
CCATTGCAGCAGCTGCAAGATGTTTTTCACAAAAGCAAGATCAAGGAGTA
AGATGCTGTCAAGAATGATTTCCGGTATATTTGTGTAGGGACATTGGATG
ATCCGGAAGTGTTGCCGCCGAAGGGAGAGTTTTTCTGTCAGAGTAGGGTT
CGTTGGATGCCGGAGATTCCGGAAAGCTTTCGGAACAAACTACGGTCTAA
CCGCCAAGGTCCCCAAAGATGCCCTTCAGATCACATCCGGTAAGCTTAAG
GAATACGTGGGTGATAATGGGTCTGGAAGTATGATACATCGGGAGTTTTG
TGGCGATTGTGGGAGCTATATTTGCGAGTATGGGATGCAATCCTACCCTG
GTTCCTGCTTCTGTCACAAAATCACCTATAACCTCAACCTCTCGTCTCCC
GACGATGCCCGCACGTCCCTCTGCCATTGCAGCAGCTGCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_59730ATCC64974_59730Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59730-T1ATCC64974_59730-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59730-T1.cdsATCC64974_59730-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59730-T1.exon4ATCC64974_59730-T1.exon4Aspergillus niger N402exon
ATCC64974_59730-T1.exon3ATCC64974_59730-T1.exon3Aspergillus niger N402exon
ATCC64974_59730-T1.exon2ATCC64974_59730-T1.exon2Aspergillus niger N402exon
ATCC64974_59730-T1.exon1ATCC64974_59730-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:273388..274031 -
Powered by Drupal