You are here

Home

ATCC64974_60090-T1, ATCC64974_60090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_60090-T1
Unique NameATCC64974_60090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:371689..372497+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_60090-T1 ID=ATCC64974_60090-T1|Name=ATCC64974_60090-T1|organism=Aspergillus niger N402|type=mRNA|length=809bp|location=Sequence derived from alignment at OGUI01000008.1:371689..372497+ (Aspergillus niger N402)
ATGACCCCCAACTGGTCCAAACTATGGACCTTCATCGCCAACCCCAAAGA
CCCCAGTTCTAGCTCCCCATCACCATATACACTCCGTCGCATAATCAAAT
CCCTCTCCCTTCTCACCGTCTTCTCCATCTTCCTCTACGCCCTCTACATT
CACTTCCAGCCCTCCATTATCCCACAAACCCCAGACCTCCCAGACCCAGA
CCTCCCTCCCTCCCCAGAAGACTCATACAAATCCATCTACGGCTACCCCC
CAACCAACCCCACCATCCCTCCCCTGCACATCCACGACCCCAGCATCCTC
TACGACCTGCCCACAAACACCTACTACGCCTACGGCTCCGGCCCTCACAT
CCCCATCCACTCCGCCCCGACCCTCCAAGGACCATGGACCAAAGTCGGCA
CCGTCCTCGATGCAGATAGTATTCTACCAAAGGGTGATCGCAAAGCCCCA
TGGGCACCGACCGCCCTCGTCCACGACGGTACCTTCTACGTCTTTTACGC
GACGAGCCATAGTGGATGTCGCGATAGCGCTATCGGCGTGGCTACCTCTA
CTTCTCCGGGCCCTGGGGGATGGGAGGACCACGGGGCGATAGCTATCTCC
GGACGAGGGGAGAGGGGGAAGGAGTACCCGTTTGATAGGGCGAATGCGAT
TGATGTTAGTGTTGTTGTTGATTATACTGACACCCAGACCCAAACCGAAC
CCTCCGAAGGAGAGATCTCTCTAGAAGAGGGAAAGAAAGGAAAAGGGAGA
GGATACATGACCTTCGGCAGTTTCTGGACGGGGATATGGCAAGTCCCGCT
GAAGCCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:371689..372497+

>ATCC64974_60090-T1 ID=ATCC64974_60090-T1|Name=ATCC64974_60090-T1|organism=Aspergillus niger N402|type=CDS|length=1386bp|location=Sequence derived from alignment at OGUI01000008.1:371689..372497+ (Aspergillus niger N402)
ATGACCCCCAACTGGTCCAAACTATGGACCTTCATCGCCAACCCCAAAGA
CCCCAGTTCTAGCTCCCCATCACCATATACACTCCGTCGCATAATCAAAT
CCCTCTCCCTTCTCACCGTCTTCTCCATCTTCCTCTACGCCCTCTACATT
CACTTCCAGCCCTCCATTATCCCACAAACCCCAGACCTCCCAGACCCAGA
CCTCCCTCCCTCCCCAGAAGACTCATACAAATCCATCTACGGCTACCCCC
CAACCAACCCCACCATCCCTCCCCTGCACATCCACGACCCCAGCATCCTC
TACGACCTGCCCACAAACACCTACTACGCCTACGGCTCCGGCCCTCACAT
CCCCATCCACTCCGCCCCGACCCTCCAAGGACCATGGACCAAAGTCGGCA
CCGTCCTCGATGCAGATAGTATTCTACCAAAGGGTGATCGCAAAGCCCCA
TGGGCACCGACCGCCCTCGTCCACGACGGTACCTTCTACGTCTTTTACGC
GACGAGCCATAGTGGATGTCGCGATAGCGCTATCGGCGTGGCTACCTCTA
CTTCTCCGGGCCCTGGGGGATGGGAGGACCACGGGGCGATAGCTATCTCC
GGACGAGGGGAGAGGGGGAAGGAGTACCCGTTTGATAGGGCGAATGCGAT
TGATTTTCTGGACGGGGATATGGCAAGTCCCGCTGAAGCCTAAATGACCC
CCAACTGGTCCAAACTATGGACCTTCATCGCCAACCCCAAAGACCCCAGT
TCTAGCTCCCCATCACCATATACACTCCGTCGCATAATCAAATCCCTCTC
CCTTCTCACCGTCTTCTCCATCTTCCTCTACGCCCTCTACATTCACTTCC
AGCCCTCCATTATCCCACAAACCCCAGACCTCCCAGACCCAGACCTCCCT
CCCTCCCCAGAAGACTCATACAAATCCATCTACGGCTACCCCCCAACCAA
CCCCACCATCCCTCCCCTGCACATCCACGACCCCAGCATCCTCTACGACC
TGCCCACAAACACCTACTACGCCTACGGCTCCGGCCCTCACATCCCCATC
CACTCCGCCCCGACCCTCCAAGGACCATGGACCAAAGTCGGCACCGTCCT
CGATGCAGATAGTATTCTACCAAAGGGTGATCGCAAAGCCCCATGGGCAC
CGACCGCCCTCGTCCACGACGGTACCTTCTACGTCTTTTACGCGACGAGC
CATAGTGGATGTCGCGATAGCGCTATCGGCGTGGCTACCTCTACTTCTCC
GGGCCCTGGGGGATGGGAGGACCACGGGGCGATAGCTATCTCCGGACGAG
GGGAGAGGGGGAAGGAGTACCCGTTTGATAGGGCGAATGCGATTGATTTT
CTGGACGGGGATATGGCAAGTCCCGCTGAAGCCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_60090ATCC64974_60090Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60090-T1.exon1ATCC64974_60090-T1.exon1Aspergillus niger N402exon
ATCC64974_60090-T1.exon2ATCC64974_60090-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60090-T1.cdsATCC64974_60090-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60090-T1ATCC64974_60090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:371689..372497 +
Powered by Drupal