You are here

Home

ATCC64974_60620-T1, ATCC64974_60620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_60620-T1
Unique NameATCC64974_60620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:532615..534101-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_60620-T1 ID=ATCC64974_60620-T1|Name=ATCC64974_60620-T1|organism=Aspergillus niger N402|type=mRNA|length=1487bp|location=Sequence derived from alignment at OGUI01000008.1:532615..534101- (Aspergillus niger N402)
ATGACCACCCCAATTCCCTACGGCGCTCCCATGCGCCAACACTTCTGCCT
CGACCCCAACTGGAAGAACCTCAACCACGGCAAGCCCCTCCCCCGTTCCC
ATTCCCATCTCCTCAAACGTTTCAAGCCTCCTAATAACGATACCCCAGGA
TCCTTCGGCACCTACCCCCTCCGGGTCCAAACCGCCCTCCGCGCCCACCA
AAGCACCGCAGAATCGCACCCGGACCTCTTCATCCGGCGCCTCTGCCCCT
CTCAAACCCAACACTCCCTCAAGTTACTCTCCACCCTCCTGCACGCGCCA
GAATCCTCTCTCGCGTTCGTCAAAAACGCCACCACGGGCGTTAACACCGT
CCTGCACAACATCCCCTTCACATCCAACGATGTGATCATCTACTTCGACA
CCATCTACGGAGCAATCGAGTACGGGCTTCTTGCCCTGCAGGAACGGACC
GGCGTGAAACTTCGGAAGGTGGAGTATACGCTTCCGATATCTCATGGGGA
GATAGTGAAGAGGTTTAGGGATGTAGTGGAGAAGGTGAGGGAAGAGGAAG
GGGGAGGGTTGAACGTTAAGGCAGCGGTGTTTGATATGGTGGTTAGTGTT
CCTGCGATCCGGTTCCCGTTTGAGGCGTTGGTGAGGGAATGTAAGGAGTT
GGGGGTGTTGAGTGTGGTTGATGGTGCGCATGGGGTGGGTATGTTGGATT
TGGATTTGGAAGCCTTGGGAGTGGATTTCTTGACGAGTAATTTGCATAAG
TATGCCCCCCTTCCCCCCCCCCTTTTTCCTTCTTTTGTCTCATTCCATTT
GGGTGTATATGTATGTGTGTGTGTGGTATTGATATGTGGTGTTGTTGCAG
GTGGCTCTACATCCCCCGCGGCTGCGCCGTGCTCTACGTCGCGCCTCAAC
ATCAACATCTCATGCGCACGACGTCGCCCACTTCCTGGGGATATATATCC
TCCGCTGCGGCGGAGGAAGCCCGTACAAATGGCACCACTGCGTCTGCGTT
CAGGAATCTGTTTCAGTCGACGGCTACGAATGACGACACGCCGTATTTGT
GTGTGCCTGAGGCGTTGAAGTTCCGGGAGGAGGTGTGTGGTGGGGAGAAG
GCTATTTATGAGTATTTGGAGAGGTTGGCGAATGAGGCGGCGGATGTGGT
GGCGGGGGTGTTGGGGACGGAGGTGTTGAGGGATGAGGAGGGGTTGTTGA
CCAGGTGTGCGATGACGAATGTGAGGTTGCCGTTGAAGGTTGGTGATGGT
GGTGATGGTGATGGGTATACGGTGGTGGAGAAGGAGGTGGTGGGGAAGGT
GACGGAGTGGTTTCGTAATGTTCTCATGGATGAGTATAAGACGTTTGTGC
CGGTGTTTGAGTACAAGGGGTGGTTGTGGATGAGGTTGTCGGCACAGGTG
TATTTGGATAAGAGTGATTTTGAGTGGTTGGGAGGTGTGTTGAAGGAGTG
TTGTGAGAGAGTGGGGAGGGAGGTTCTTCAAAAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:532615..534101-

>ATCC64974_60620-T1 ID=ATCC64974_60620-T1|Name=ATCC64974_60620-T1|organism=Aspergillus niger N402|type=CDS|length=3951bp|location=Sequence derived from alignment at OGUI01000008.1:532615..534101- (Aspergillus niger N402)
GTGGCTCTACATCCCCCGCGGCTGCGCCGTGCTCTACGTCGCGCCTCAAC
ATCAACATCTCATGCGCACGACGTCGCCCACTTCCTGGGGATATATATCC
TCCGCTGCGGCGGAGGAAGCCCGTACAAATGGCACCACTGCGTCTGCGTT
CAGGAATCTGTTTCAGTCGACGGCTACGAATGACGACACGCCGTATTTGT
GTGTGCCTGAGGCGTTGAAGTTCCGGGAGGAGGTGTGTGGTGGGGAGAAG
GCTATTTATGAGTATTTGGAGAGGTTGGCGAATGAGGCGGCGGATGTGGT
GGCGGGGGTGTTGGGGACGGAGGTGTTGAGGGATGAGGAGGGGTTGTTGA
CCAGGTGTGCGATGACGAATGTGAGGTTGCCGTTGAAGGTTGGTGATGGT
GGTGATGGTGATGGGTATACGGTGGTGGAGAAGGAGGTGGTGGGGAAGGT
GACGGAGTGGTTTCGTAATGTTCTCATGGATGAGTATAAGACGTTTGTGC
CGGTGTTTGAGTACAAGGGGTGGTTGTGGATGAGGTTGTCGGCACAGGTG
TATTTGGATAAGAGTGATTTTGAGTGGTTGGGAGGTGTGTTGAAGGAGTG
TTGTGAGAGAGTGGGGAGGGAGGTTCTTCAAAAGTAGGATCCTTCGGCAC
CTACCCCCTCCGGGTCCAAACCGCCCTCCGCGCCCACCAAAGCACCGCAG
AATCGCACCCGGACCTCTTCATCCGGCGCCTCTGCCCCTCTCAAACCCAA
CACTCCCTCAAGTTACTCTCCACCCTCCTGCACGCGCCAGAATCCTCTCT
CGCGTTCGTCAAAAACGCCACCACGGGCGTTAACACCGTCCTGCACAACA
TCCCCTTCACATCCAACGATGTGATCATCTACTTCGACACCATCTACGGA
GCAATCGAGTACGGGCTTCTTGCCCTGCAGGAACGGACCGGCGTGAAACT
TCGGAAGGTGGAGTATACGCTTCCGATATCTCATGGGGAGATAGTGAAGA
GGTTTAGGGATGTAGTGGAGAAGGTGAGGGAAGAGGAAGGGGGAGGGTTG
AACGTTAAGGCAGCGGTGTTTGATATGGTGGTTAGTGTTCCTGCGATCCG
GTTCCCGTTTGAGGCGTTGGTGAGGGAATGTAAGGAGTTGGGGGTGTTGA
GTGTGGTTGATGGTGCGCATGGGGTGGGTATGTTGGATTTGGATTTGGAA
GCCTTGGGAGTGGATTTCTTGACGAGTAATTTGCATAAATGACCACCCCA
ATTCCCTACGGCGCTCCCATGCGCCAACACTTCTGCCTCGACCCCAACTG
GAAGAACCTCAACCACGGTGGCTCTACATCCCCCGCGGCTGCGCCGTGCT
CTACGTCGCGCCTCAACATCAACATCTCATGCGCACGACGTCGCCCACTT
CCTGGGGATATATATCCTCCGCTGCGGCGGAGGAAGCCCGTACAAATGGC
ACCACTGCGTCTGCGTTCAGGAATCTGTTTCAGTCGACGGCTACGAATGA
CGACACGCCGTATTTGTGTGTGCCTGAGGCGTTGAAGTTCCGGGAGGAGG
TGTGTGGTGGGGAGAAGGCTATTTATGAGTATTTGGAGAGGTTGGCGAAT
GAGGCGGCGGATGTGGTGGCGGGGGTGTTGGGGACGGAGGTGTTGAGGGA
TGAGGAGGGGTTGTTGACCAGGTGTGCGATGACGAATGTGAGGTTGCCGT
TGAAGGTTGGTGATGGTGGTGATGGTGATGGGTATACGGTGGTGGAGAAG
GAGGTGGTGGGGAAGGTGACGGAGTGGTTTCGTAATGTTCTCATGGATGA
GTATAAGACGTTTGTGCCGGTGTTTGAGTACAAGGGGTGGTTGTGGATGA
GGTTGTCGGCACAGGTGTATTTGGATAAGAGTGATTTTGAGTGGTTGGGA
GGTGTGTTGAAGGAGTGTTGTGAGAGAGTGGGGAGGGAGGTTCTTCAAAA
GTAGGATCCTTCGGCACCTACCCCCTCCGGGTCCAAACCGCCCTCCGCGC
CCACCAAAGCACCGCAGAATCGCACCCGGACCTCTTCATCCGGCGCCTCT
GCCCCTCTCAAACCCAACACTCCCTCAAGTTACTCTCCACCCTCCTGCAC
GCGCCAGAATCCTCTCTCGCGTTCGTCAAAAACGCCACCACGGGCGTTAA
CACCGTCCTGCACAACATCCCCTTCACATCCAACGATGTGATCATCTACT
TCGACACCATCTACGGAGCAATCGAGTACGGGCTTCTTGCCCTGCAGGAA
CGGACCGGCGTGAAACTTCGGAAGGTGGAGTATACGCTTCCGATATCTCA
TGGGGAGATAGTGAAGAGGTTTAGGGATGTAGTGGAGAAGGTGAGGGAAG
AGGAAGGGGGAGGGTTGAACGTTAAGGCAGCGGTGTTTGATATGGTGGTT
AGTGTTCCTGCGATCCGGTTCCCGTTTGAGGCGTTGGTGAGGGAATGTAA
GGAGTTGGGGGTGTTGAGTGTGGTTGATGGTGCGCATGGGGTGGGTATGT
TGGATTTGGATTTGGAAGCCTTGGGAGTGGATTTCTTGACGAGTAATTTG
CATAAATGACCACCCCAATTCCCTACGGCGCTCCCATGCGCCAACACTTC
TGCCTCGACCCCAACTGGAAGAACCTCAACCACGGTGGCTCTACATCCCC
CGCGGCTGCGCCGTGCTCTACGTCGCGCCTCAACATCAACATCTCATGCG
CACGACGTCGCCCACTTCCTGGGGATATATATCCTCCGCTGCGGCGGAGG
AAGCCCGTACAAATGGCACCACTGCGTCTGCGTTCAGGAATCTGTTTCAG
TCGACGGCTACGAATGACGACACGCCGTATTTGTGTGTGCCTGAGGCGTT
GAAGTTCCGGGAGGAGGTGTGTGGTGGGGAGAAGGCTATTTATGAGTATT
TGGAGAGGTTGGCGAATGAGGCGGCGGATGTGGTGGCGGGGGTGTTGGGG
ACGGAGGTGTTGAGGGATGAGGAGGGGTTGTTGACCAGGTGTGCGATGAC
GAATGTGAGGTTGCCGTTGAAGGTTGGTGATGGTGGTGATGGTGATGGGT
ATACGGTGGTGGAGAAGGAGGTGGTGGGGAAGGTGACGGAGTGGTTTCGT
AATGTTCTCATGGATGAGTATAAGACGTTTGTGCCGGTGTTTGAGTACAA
GGGGTGGTTGTGGATGAGGTTGTCGGCACAGGTGTATTTGGATAAGAGTG
ATTTTGAGTGGTTGGGAGGTGTGTTGAAGGAGTGTTGTGAGAGAGTGGGG
AGGGAGGTTCTTCAAAAGTAGGATCCTTCGGCACCTACCCCCTCCGGGTC
CAAACCGCCCTCCGCGCCCACCAAAGCACCGCAGAATCGCACCCGGACCT
CTTCATCCGGCGCCTCTGCCCCTCTCAAACCCAACACTCCCTCAAGTTAC
TCTCCACCCTCCTGCACGCGCCAGAATCCTCTCTCGCGTTCGTCAAAAAC
GCCACCACGGGCGTTAACACCGTCCTGCACAACATCCCCTTCACATCCAA
CGATGTGATCATCTACTTCGACACCATCTACGGAGCAATCGAGTACGGGC
TTCTTGCCCTGCAGGAACGGACCGGCGTGAAACTTCGGAAGGTGGAGTAT
ACGCTTCCGATATCTCATGGGGAGATAGTGAAGAGGTTTAGGGATGTAGT
GGAGAAGGTGAGGGAAGAGGAAGGGGGAGGGTTGAACGTTAAGGCAGCGG
TGTTTGATATGGTGGTTAGTGTTCCTGCGATCCGGTTCCCGTTTGAGGCG
TTGGTGAGGGAATGTAAGGAGTTGGGGGTGTTGAGTGTGGTTGATGGTGC
GCATGGGGTGGGTATGTTGGATTTGGATTTGGAAGCCTTGGGAGTGGATT
TCTTGACGAGTAATTTGCATAAATGACCACCCCAATTCCCTACGGCGCTC
CCATGCGCCAACACTTCTGCCTCGACCCCAACTGGAAGAACCTCAACCAC
G
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_60620ATCC64974_60620Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60620-T1ATCC64974_60620-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60620-T1.cdsATCC64974_60620-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60620-T1.exon3ATCC64974_60620-T1.exon3Aspergillus niger N402exon
ATCC64974_60620-T1.exon2ATCC64974_60620-T1.exon2Aspergillus niger N402exon
ATCC64974_60620-T1.exon1ATCC64974_60620-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR000192
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00266
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:532615..534101 -
Powered by Drupal