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ATCC64974_60700-T1, ATCC64974_60700-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_60700-T1
Unique NameATCC64974_60700-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:567870..568573+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_60700-T1 ID=ATCC64974_60700-T1|Name=ATCC64974_60700-T1|organism=Aspergillus niger N402|type=mRNA|length=704bp|location=Sequence derived from alignment at OGUI01000008.1:567870..568573+ (Aspergillus niger N402)
ATGCTTCTCGACGAGAATCCCGCTGGTGTATGTTACTTTTGCCCCTTCAT
CATGCCCACTGCTGACTCTCCAGCTCATCAACCACACCATCGGCAACTTC
AACATCCACCCCGATAAACAAGCCGTCACCCGCATCAATGACTCGCTCGC
CGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAATCGGCCC
TGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCATGAGGAG
GCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGGTCGAGCT
GGACACGAAGAAATTCCGTATTGCCAAGTCGGCTACCGAGCTGGAGATTG
AAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGACTGGCC
GATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGCGAGCG
CGAGATGGATGATGCGACGCTGTGAGTACTTCTCATTTGTTTGACATGTA
GTACCCGGAGGCTGACTATTTGGTAGGCTGCGATTGAAAATCTACCGGTC
CTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGCGG
TGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACCCG
AAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAGGG
GTAG
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Coding sequence (CDS) from alignment at OGUI01000008.1:567870..568573+

>ATCC64974_60700-T1 ID=ATCC64974_60700-T1|Name=ATCC64974_60700-T1|organism=Aspergillus niger N402|type=CDS|length=1809bp|location=Sequence derived from alignment at OGUI01000008.1:567870..568573+ (Aspergillus niger N402)
ATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCATCGGCAA
CTTCAACATCCACCCCGATAAACAAGCCGTCACCCGCATCAATGACTCGC
TCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAATCG
GCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCATGA
GGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGGTCG
AGCTGGACACGAAGAAATTCCGTATTGCCAAGTCGGCTACCGAGCTGGAG
ATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGACT
GGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGCG
AGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATCTACCGGTCC
TTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGCGGT
GATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACCCGA
AGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAGGGG
TAGATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCATCGG
CAACTTCAACATCCACCCCGATAAACAAGCCGTCACCCGCATCAATGACT
CGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAA
TCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCA
TGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGG
TCGAGCTGGACACGAAGAAATTCCGTATTGCCAAGTCGGCTACCGAGCTG
GAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCG
ACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCC
GCGAGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATCTACCGG
TCCTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGC
GGTGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACC
CGAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAG
GGGTAGATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCAT
CGGCAACTTCAACATCCACCCCGATAAACAAGCCGTCACCCGCATCAATG
ACTCGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCC
GAATCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCA
GCATGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGA
TGGTCGAGCTGGACACGAAGAAATTCCGTATTGCCAAGTCGGCTACCGAG
CTGGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGA
GCGACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGC
GCCGCGAGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATCTAC
CGGTCCTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAA
GGCGGTGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTG
ACCCGAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATG
CAGGGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPC24ATCC64974_60700Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60700-T1.exon1ATCC64974_60700-T1.exon1Aspergillus niger N402exon
ATCC64974_60700-T1.exon2ATCC64974_60700-T1.exon2Aspergillus niger N402exon
ATCC64974_60700-T1.exon3ATCC64974_60700-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60700-T1.cdsATCC64974_60700-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_60700-T1ATCC64974_60700-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR038066
DBxrefInterPro:IPR013252
DBxrefPFAM:PF08286
Productkinetochore-associated Ndc80 complex subunit spc24
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:567870..568573 +
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