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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000008.1:569920..570583+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_60720-T1 ID=ATCC64974_60720-T1|Name=ATCC64974_60720-T1|organism=Aspergillus niger N402|type=mRNA|length=664bp|location=Sequence derived from alignment at OGUI01000008.1:569920..570583+ (Aspergillus niger N402)
ATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGGTACATCC
CCCATCCCATTACCCTCACCCTCAACACCAACACCAGCCACACCCAACTA
ACTCTAAAACCACAGCTCGCAACCCAATTCTACGCGACTCTATGCTACCT
AACGACCTACCACGACAACATCCCCGCGACGCCGCCTCCCACAAGCACAA
CCCCCAGCGCTGCGCCCCTACTGGCAAAAATCCCCAAGAACGCATCTACC
CCCCCGGTCCCAGCGTCCGCGCCCCAAGCAGCACAATCCCAATCGCAAGC
GTCGCCACCACCACCCGACACCACAAATCCCCAAACCGGAGGGCAGAATG
CAGATCAACAGCAACAAAGCCCAGATGGTGAAGGTCTCCCTGCGCCGGAC
AGCCCCGCTACATTTGCAGCCAGACAACGGGAACTAGCGCGCGATCTCGT
CATCAAGGAGCAGCAGATCGAGTACTTGATTAGTGTGCTGCCGGGGATAG
ATAGTAGTGAGGCGGAGCAGGAGAGGCGGATCCGGGAGCTGGAGGGGGAG
TTGAGGATTGTGGAGGGGGTGAGGGAGGAGAGGAGACGCGAGTTGGGGGT
GTTGAGGAGGAGGTTGGAGGGTGTTTTGGGGGTGGTGGAGAGGGGGATTT
ATTCTAGGGATTAG back to topCoding sequence (CDS) from alignment at OGUI01000008.1:569920..570583+ >ATCC64974_60720-T1 ID=ATCC64974_60720-T1|Name=ATCC64974_60720-T1|organism=Aspergillus niger N402|type=CDS|length=1182bp|location=Sequence derived from alignment at OGUI01000008.1:569920..570583+ (Aspergillus niger N402)
ATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGCTCGCAAC
CCAATTCTACGCGACTCTATGCTACCTAACGACCTACCACGACAACATCC
CCGCGACGCCGCCTCCCACAAGCACAACCCCCAGCGCTGCGCCCCTACTG
GCAAAAATCCCCAAGAACGCATCTACCCCCCCGGTCCCAGCGTCCGCGCC
CCAAGCAGCACAATCCCAATCGCAAGCGTCGCCACCACCACCCGACACCA
CAAATCCCCAAACCGGAGGGCAGAATGCAGATCAACAGCAACAAAGCCCA
GATGGTGAAGGTCTCCCTGCGCCGGACAGCCCCGCTACATTTGCAGCCAG
ACAACGGGAACTAGCGCGCGATCTCGTCATCAAGGAGCAGCAGATCGAGT
ACTTGATTAGTGTGCTGCCGGGGATAGATAGTAGTGAGGCGGAGCAGGAG
AGGCGGATCCGGGAGCTGGAGGGGGAGTTGAGGATTGTGGAGGGGGTGAG
GGAGGAGAGGAGACGCGAGTTGGGGGTGTTGAGGAGGAGGTTGGAGGGTG
TTTTGGGGGTGGTGGAGAGGGGGATTTATTCTAGGGATTAGATGGCAGAC
ATCTTAACCCAACTTCAAACCTGCCTCGACCAGCTCGCAACCCAATTCTA
CGCGACTCTATGCTACCTAACGACCTACCACGACAACATCCCCGCGACGC
CGCCTCCCACAAGCACAACCCCCAGCGCTGCGCCCCTACTGGCAAAAATC
CCCAAGAACGCATCTACCCCCCCGGTCCCAGCGTCCGCGCCCCAAGCAGC
ACAATCCCAATCGCAAGCGTCGCCACCACCACCCGACACCACAAATCCCC
AAACCGGAGGGCAGAATGCAGATCAACAGCAACAAAGCCCAGATGGTGAA
GGTCTCCCTGCGCCGGACAGCCCCGCTACATTTGCAGCCAGACAACGGGA
ACTAGCGCGCGATCTCGTCATCAAGGAGCAGCAGATCGAGTACTTGATTA
GTGTGCTGCCGGGGATAGATAGTAGTGAGGCGGAGCAGGAGAGGCGGATC
CGGGAGCTGGAGGGGGAGTTGAGGATTGTGGAGGGGGTGAGGGAGGAGAG
GAGACGCGAGTTGGGGGTGTTGAGGAGGAGGTTGGAGGGTGTTTTGGGGG
TGGTGGAGAGGGGGATTTATTCTAGGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_60720-T1 | ATCC64974_60720-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265SHM |
| DBxref | InterPro:IPR037212 |
| DBxref | InterPro:IPR021384 |
| DBxref | PFAM:PF11221 |
| Product | RNA polymerase II mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000008.1 | supercontig | OGUI01000008.1:569920..570583 + |
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