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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000008.1:598970..600182- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_60830-T1 ID=ATCC64974_60830-T1|Name=ATCC64974_60830-T1|organism=Aspergillus niger N402|type=mRNA|length=1213bp|location=Sequence derived from alignment at OGUI01000008.1:598970..600182- (Aspergillus niger N402)
ATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAA
GCGGCGCCATGTCAAGGTATTAGCTTACGCTCCGGTTATCCCTACGAACC
GACTAACCTCTCCAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCCA
TAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAG
CAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTATA
CCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGC
GCCCTTCCGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCACA
ATTTGTACACCAAGATCCGCACCAGCTTCGACCCCAACAGATCTATATCA
TGGCTAGCAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACGA
GCTGCTCGCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGCC
GCGAATACTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTCC
ATTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGAGAATTGCGTCCATCT
CTTCGTCTTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTCG
TCTACCGCGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGTC
CACTTCTTCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCTC
GCATATGATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAG
ATCTGTATAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGATG
GATCTGATCTATAGCGCCAAGCTCGGGAACGAACTCACGGGAATAAATAG
GGAGGCTGTAGAATCGTTACAGTCGTGTTTGAATGTTATAGAAGAGAATC
TGGACGAGCTGCATGTGGGAATTAATGCGGTAACTACGTGGCCTATCCTG
ATGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCACT
GATTATTTTGGCTCATTATGCGTGTTTGTTGCATCGATTTCGGGAATTTT
GGATGTTTGGGGATTCGGGGCAGTTTGTTATCCTGGAGGTTATGGGATGC
TTGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAGA
TGATCTTAACTAG back to topCoding sequence (CDS) from alignment at OGUI01000008.1:598970..600182- >ATCC64974_60830-T1 ID=ATCC64974_60830-T1|Name=ATCC64974_60830-T1|organism=Aspergillus niger N402|type=CDS|length=2328bp|location=Sequence derived from alignment at OGUI01000008.1:598970..600182- (Aspergillus niger N402)
TGCGATGAGAGACATCCCATTTGCTCGAATTGCCATAGCGCCGAGCGAGT
CTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAGCAGCTCCACGGCCAG
TAGTACATGCAGCCAGAGCAGCTTCACCGCCTATACCTCTCGGGAGTACA
CCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGCGCCCTTCCGCAGCCA
GGCCGTGAACATACTCCATATCGAGCTCTTCCACAATTTGTACACCAAGA
TCCGCACCAGCTTCGACCCCAACAGATCTATATCATGGCTAGCAGATGGT
GTGGACCCTACTACAGCCCCATATCTAGTCAACGAGCTGCTCGCATTTAG
TGCCCTACACCTAAGTACGGCACGACCAGATCGCCGCGAATACTACCGCT
ACCACGCAGCCCAGCTACAAACCGACGCGTTGTCCATTTTCCAAGCGTCC
TCCCCGCAAGTAACACGAGAGAATTGCGTCCATCTCTTCGTCTTCGCAGC
TACTCTGGGTATCCACATGCTCTGCGACACACTCGTCTACCGCGAAGGAG
GCGGCGACTTTGATACCTTCCTCGACCGCTTCGTCCACTTCTTCCGTGTT
TATCATGGTGTCCGTACCATTGTTAGCAAAGCCTCGCATATGATTCAGGA
TACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAGATCTGTATAAATTTA
ATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGATGGATCTGATCTATAGC
GCCAAGCTCGGGAACGAACTCACGGGAATAAATAGGGAGGCTGTAGAATC
GTTACAGTCGTGTTTGAATGTTATAGAAGAGAATCTGGACGAGCTGCATG
TGGGAATTAATGCGGTAACTACGTGGCCTATCCTGATGAAGATTGAGTTC
GCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCACTGATTATTTTGGCTCA
TTATGCGTGTTTGTTGCATCGATTTCGGGAATTTTGGATGTTTGGGGATT
CGGGGCAGTTTGTTATCCTGGAGGTTATGGGATGCTTGGGGGAGGAGTGG
GAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAGATGATCTTAACTAGAT
GCCACAGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAAGC
GGCGCCATGTCAAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCCAT
AGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAGC
AGCTCCACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTATAC
CTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGCG
CCCTTCCGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCACAA
TTTGTACACCAAGATCCGCACCAGCTTCGACCCCAACAGATCTATATCAT
GGCTAGCAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACGAG
CTGCTCGCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGCCG
CGAATACTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTCCA
TTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGAGAATTGCGTCCATCTC
TTCGTCTTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTCGT
CTACCGCGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGTCC
ACTTCTTCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCTCG
CATATGATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAGA
TCTGTATAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGATGG
ATCTGATCTATAGCGCCAAGCTCGGGAACGAACTCACGGGAATAAATAGG
GAGGCTGTAGAATCGTTACAGTCGTGTTTGAATGTTATAGAAGAGAATCT
GGACGAGCTGCATGTGGGAATTAATGCGGTAACTACGTGGCCTATCCTGA
TGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCACTG
ATTATTTTGGCTCATTATGCGTGTTTGTTGCATCGATTTCGGGAATTTTG
GATGTTTGGGGATTCGGGGCAGTTTGTTATCCTGGAGGTTATGGGATGCT
TGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAGAT
GATCTTAACTAGATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGATG
TCTCGAGTGTAAGCGGCGCCATGTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_60830-T1 | ATCC64974_60830-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000008.1 | supercontig | OGUI01000008.1:598970..600182 - |
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