You are here

Home

ATCC64974_61070-T1, ATCC64974_61070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61070-T1
Unique NameATCC64974_61070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:707532..708300-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61070-T1 ID=ATCC64974_61070-T1|Name=ATCC64974_61070-T1|organism=Aspergillus niger N402|type=mRNA|length=769bp|location=Sequence derived from alignment at OGUI01000008.1:707532..708300- (Aspergillus niger N402)
ATGGACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAA
CCTCCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGA
TCGTGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCT
CGACAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAA
ACAGCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACG
ACGCCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCT
TGTTTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGA
GGAAGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGT
TTAATGGGGCGGTATGTTTATTGTTTGTTTTCTTACGTCCTTCTCTTTTA
ACTTGTGCCTCTAAAATTCATCCGTGGGCAAGAAGAAATCATGCTGACGT
AATTCTGGGATGGGTGGGTGAAATAGAACGCTATCGAGCGTGCGCATGCT
GCTTGGTTGGAAGGGAAAATCGATAAGACGGGTGTTATGATTCATAAGGT
CATTTCGGAGGTGGATATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGT
TTGTGAAGGGGGAGGATGAAGATCTGCATAGATTTGAGCAGAAGGTGCAT
GAGGTCGAGTGGGGAGTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGA
GGTCCAGGAGGCAAGGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:707532..708300-

>ATCC64974_61070-T1 ID=ATCC64974_61070-T1|Name=ATCC64974_61070-T1|organism=Aspergillus niger N402|type=CDS|length=1308bp|location=Sequence derived from alignment at OGUI01000008.1:707532..708300- (Aspergillus niger N402)
AACGCTATCGAGCGTGCGCATGCTGCTTGGTTGGAAGGGAAAATCGATAA
GACGGGTGTTATGATTCATAAGGTCATTTCGGAGGTGGATATGGGGCAGC
CCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGGGGAGGATGAAGATCTG
CATAGATTTGAGCAGAAGGTGCATGAGGTCGAGTGGGGAGTGGTTATTGA
GGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAGGCAAGGTAGATGGACA
CACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAACCTCCAA
GCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGATCGTGCG
CGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCTCGACAGG
CCAACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAAACAGCAC
CCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACGACGCCGA
ATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCTTGTTTGG
GATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGAGGAAGCT
AAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGTTTAATGG
GGCGAACGCTATCGAGCGTGCGCATGCTGCTTGGTTGGAAGGGAAAATCG
ATAAGACGGGTGTTATGATTCATAAGGTCATTTCGGAGGTGGATATGGGG
CAGCCCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGGGGAGGATGAAGA
TCTGCATAGATTTGAGCAGAAGGTGCATGAGGTCGAGTGGGGAGTGGTTA
TTGAGGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAGGCAAGGTAGATG
GACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAACCT
CCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGATCG
TGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCTCGA
CAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAAACA
GCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACGACG
CCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCTTGT
TTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGAGGA
AGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGTTTA
ATGGGGCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004644phosphoribosylglycinamide formyltransferase activity
GO:0016742hydroxymethyl-, formyl- and related transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006189'de novo' IMP biosynthetic process
GO:0009058biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_61070ATCC64974_61070Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61070-T1ATCC64974_61070-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61070-T1.cdsATCC64974_61070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61070-T1.exon2ATCC64974_61070-T1.exon2Aspergillus niger N402exon
ATCC64974_61070-T1.exon1ATCC64974_61070-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264G7L
DBxrefInterPro:IPR036477
DBxrefInterPro:IPR004607
DBxrefInterPro:IPR002376
DBxrefPFAM:PF00551
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:707532..708300 -
Powered by Drupal