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ATCC64974_61240-T1, ATCC64974_61240-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61240-T1
Unique NameATCC64974_61240-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:752183..753018-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61240-T1 ID=ATCC64974_61240-T1|Name=ATCC64974_61240-T1|organism=Aspergillus niger N402|type=mRNA|length=836bp|location=Sequence derived from alignment at OGUI01000008.1:752183..753018- (Aspergillus niger N402)
ATGGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGA
GATTCGCATCCTCATCCTCGGTCTGGTAGGTATAATCATGCTTTGGCACT
AGGCATCAAGCTACTAGCGAGTTTCATACTAACCCGCGCTCCCATCTCTA
GGATAACGCCGGAAAAACAACACTTCTTTACAGACTCAAGGTGCGTATAG
CCTTGCAGAGCTACTCTACTGTCAGCTAGAGGCCAGTGTTAATGTGCCAG
GAATAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGT
CGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGTAAGTCAAC
GCTACAATACCATTATAGTTGCCATTTGGTAGAGAAAAAGTATCTGAGGT
TGCTGACTTTTCGCTGTCGTTCAGGATCTCGGAGGTCAAACGTCCATTCG
ACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCA
TTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCG
GCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGC
CAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGG
CTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGC
TCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGGT
ATGTGCATCTTCAAGCTCCTTTCCTTCACTTTGGATAAGTACTGACCTTT
TATACACAGCAAACTCTTCAGTCTGAAAACGCATGA
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Coding sequence (CDS) from alignment at OGUI01000008.1:752183..753018-

>ATCC64974_61240-T1 ID=ATCC64974_61240-T1|Name=ATCC64974_61240-T1|organism=Aspergillus niger N402|type=CDS|length=2745bp|location=Sequence derived from alignment at OGUI01000008.1:752183..753018- (Aspergillus niger N402)
CAAACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCAT
TCGACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCG
TCATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTA
GCGGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATT
TGCCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAG
AGGCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCA
TGCTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGT
GATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAAT
CGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAA
ACAACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTG
GTCCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGC
AAACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATT
CGACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGT
CATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAG
CGGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTT
GCCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGA
GGCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCAT
GCTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTG
ATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATC
GGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAA
CAACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGG
TCCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCA
AACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTC
GACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTC
ATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGC
GGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTG
CCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAG
GCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATG
CTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGA
TTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCG
GTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAAC
AACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGT
CCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCAA
ACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTCG
ACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCA
TTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCG
GCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGC
CAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGG
CTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGC
TCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGAT
TGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCGG
TGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAACA
ACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGTC
CTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCAAA
CTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTCGA
CCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCAT
TGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCGG
CTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGCC
AACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGGC
TCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGCT
CTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGATT
GGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCGGT
GACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAACAA
CACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGTCC
TTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARL1ATCC64974_61240Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61240-T1ATCC64974_61240-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61240-T1.cdsATCC64974_61240-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61240-T1.exon5ATCC64974_61240-T1.exon5Aspergillus niger N402exon
ATCC64974_61240-T1.exon4ATCC64974_61240-T1.exon4Aspergillus niger N402exon
ATCC64974_61240-T1.exon3ATCC64974_61240-T1.exon3Aspergillus niger N402exon
ATCC64974_61240-T1.exon2ATCC64974_61240-T1.exon2Aspergillus niger N402exon
ATCC64974_61240-T1.exon1ATCC64974_61240-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductArf GTPase arl1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:752183..753018 -
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