You are here

Home

ATCC64974_61300-T1, ATCC64974_61300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61300-T1
Unique NameATCC64974_61300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:767388..768393+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61300-T1 ID=ATCC64974_61300-T1|Name=ATCC64974_61300-T1|organism=Aspergillus niger N402|type=mRNA|length=1006bp|location=Sequence derived from alignment at OGUI01000008.1:767388..768393+ (Aspergillus niger N402)
ATGGCTCTTGAACTAAAAGAAAAGGGCAACCAGCTCTTTAAAGAAGGCGA
TTACAATGGCGCCGAGGAGATGTATTCACAAGCGTGAGCATATATCCCAC
TACCCCGCTAACACCCAAACCTCCACTAAATACCAAGCGTATACTAACCA
CCGAATACCTACAACAAACAGAATCCTCAAGAACCCTAAAGAACCCACCT
TCTTCTCCAACCGCGCCCTCACCCGCATCCGTCTCGAAAACTGGGCCGGA
GTTGAGCACGATGCCCGCGCCGCCATCGATCTGTACGGCGCCAAATCTCC
TACTAGTTTGAAATCCTCCTGGTATCTGGCACAAGCGCTGTTGGGCTTGC
AACGACCTCAGGAAGCATACGATGTAGCCATTGAAGGGTATAAGGCGAGT
CTGGCGGCGAAGAACATCCAGACGGAGAATTTGTCGCGGACGGTGCTGCG
CGCTAAGCAGGCAATTTGGGCGGCCAAGGAGACGGCGCGGATAAGGGAGT
TGGATGAGACGCTGGCGAGTGTGGAGGGGCTGATTGAGGCGGAGATGGAG
AGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAGAAGGGCGAGATTGGGGA
GATTGGGTTTAGGGAGGATGAGAGGGAGATTAGAGAGGATGCTGAGCGGA
AGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTGCGTCGGAGGGGAAGGTG
GTTGAGAGAGTAAGTTCTTCCTTCTTCCTTTTCGGTGAGTTACTAGTGAG
TTGTGCTGATAATATGGTATAGGTTGTGCCTGATTATCTGGTGGATGGAA
TTACGTTTGAGATTATGCATGACCCTGTTATCACTCCATCCGGGACCAGC
TTTGACCGGTTTGGCATCACCAAGTACGTGGAGCAGGCCAAGGTTGACCC
CATCACACGAGTGCCGATGACGGTGAATGATCTTCGGCCGAATTATGCGT
TGAAGGCGGCGTGCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGTGGAT
TGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:767388..768393+

>ATCC64974_61300-T1 ID=ATCC64974_61300-T1|Name=ATCC64974_61300-T1|organism=Aspergillus niger N402|type=CDS|length=2565bp|location=Sequence derived from alignment at OGUI01000008.1:767388..768393+ (Aspergillus niger N402)
ATGGCTCTTGAACTAAAAGAAAAGGGCAACCAGCTCTTTAAAGAAGGCGA
TTACAATGGCGCCGAGGAGATGTATTCACAAGCAATCCTCAAGAACCCTA
AAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCATCCGTCTCGAA
AACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCGATCTGTACGG
CGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTGGCACAAGCGC
TGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGCCATTGAAGGG
TATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGAATTTGTCGCG
GACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGACGGCGC
GGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGGGCTGATTGAG
GCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAGAAGGG
CGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAGATTAGAGAGG
ATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTGCGTCG
GAGGGGAAGGTGGTTGAGAGAGTTGTGCCTGATTATCTGGTGGATGGAAT
TACGTTTGAGATTATGCATGACCCTGTTATCACTCCATCCGGGACCAGCT
TTGACCGGTTTGGCATCACCAAGTACGTGGAGCAGGCCAAGGTTGACCCC
ATCACACGAGTGCCGATGACGGTGAATGATCTTCGGCCGAATTATGCGTT
GAAGGCGGCGTGCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGTGGATT
GGTGAATGGCTCTTGAACTAAAAGAAAAGGGCAACCAGCTCTTTAAAGAA
GGCGATTACAATGGCGCCGAGGAGATGTATTCACAAGCAATCCTCAAGAA
CCCTAAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCATCCGTC
TCGAAAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCGATCTG
TACGGCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTGGCACA
AGCGCTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGCCATTG
AAGGGTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGAATTTG
TCGCGGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGAC
GGCGCGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGGGCTGA
TTGAGGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAG
AAGGGCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAGATTAG
AGAGGATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTG
CGTCGGAGGGGAAGGTGGTTGAGAGAGTTGTGCCTGATTATCTGGTGGAT
GGAATTACGTTTGAGATTATGCATGACCCTGTTATCACTCCATCCGGGAC
CAGCTTTGACCGGTTTGGCATCACCAAGTACGTGGAGCAGGCCAAGGTTG
ACCCCATCACACGAGTGCCGATGACGGTGAATGATCTTCGGCCGAATTAT
GCGTTGAAGGCGGCGTGCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGT
GGATTGGTGAATGGCTCTTGAACTAAAAGAAAAGGGCAACCAGCTCTTTA
AAGAAGGCGATTACAATGGCGCCGAGGAGATGTATTCACAAGCAATCCTC
AAGAACCCTAAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCAT
CCGTCTCGAAAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCG
ATCTGTACGGCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTG
GCACAAGCGCTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGC
CATTGAAGGGTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGA
ATTTGTCGCGGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAG
GAGACGGCGCGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGG
GCTGATTGAGGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGC
TGGAGAAGGGCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAG
ATTAGAGAGGATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGC
GATTGCGTCGGAGGGGAAGGTGGTTGAGAGAGTTGTGCCTGATTATCTGG
TGGATGGAATTACGTTTGAGATTATGCATGACCCTGTTATCACTCCATCC
GGGACCAGCTTTGACCGGTTTGGCATCACCAAGTACGTGGAGCAGGCCAA
GGTTGACCCCATCACACGAGTGCCGATGACGGTGAATGATCTTCGGCCGA
ATTATGCGTTGAAGGCGGCGTGCGAGGAGTTCCTGGATAAGAATGGCTGG
GCAGTGGATTGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_61300ATCC64974_61300Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61300-T1.exon1ATCC64974_61300-T1.exon1Aspergillus niger N402exon
ATCC64974_61300-T1.exon2ATCC64974_61300-T1.exon2Aspergillus niger N402exon
ATCC64974_61300-T1.exon3ATCC64974_61300-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61300-T1.cdsATCC64974_61300-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61300-T1ATCC64974_61300-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR003613
DBxrefPFAM:PF04564
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:767388..768393 +
Powered by Drupal