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ATCC64974_61350-T1, ATCC64974_61350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61350-T1
Unique NameATCC64974_61350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:776559..777504+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61350-T1 ID=ATCC64974_61350-T1|Name=ATCC64974_61350-T1|organism=Aspergillus niger N402|type=mRNA|length=946bp|location=Sequence derived from alignment at OGUI01000008.1:776559..777504+ (Aspergillus niger N402)
ATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATCTCCTTCCT
CGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACTCGAGGGGC
TTGAATTACTGGGAGTACGTCCTATACACACATCTTCCGCTACTAATCAC
AGCTAACAACTCTTCCAATAGGGCCCCGTCTCCCCCCTCCTCCCACCCCG
ACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGCC
GTGCCAACATCCTCCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTC
ATCCTCGAAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTCTCC
GCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTC
CGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCG
CCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGGCGA
GCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGG
AGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTG
AAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGT
CCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGG
GAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGAT
GGACTGAGGTATGTCCTTGTCACTTCTTCTATTCTTTTGTTTCACAATCG
TTGTTGGAGGTGGGTTGCTAACGAGTCATGTCGATAGGCGCATCGGGGCG
TCCAAGGAACAGGCGAGGAGAGAAGAGATGGCAGAGGAAATGGCGAATGG
GGGGTATGATGGGACACAAGACGATGATGATGAAATGGAGTTTTAG
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Coding sequence (CDS) from alignment at OGUI01000008.1:776559..777504+

>ATCC64974_61350-T1 ID=ATCC64974_61350-T1|Name=ATCC64974_61350-T1|organism=Aspergillus niger N402|type=CDS|length=2430bp|location=Sequence derived from alignment at OGUI01000008.1:776559..777504+ (Aspergillus niger N402)
ATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATCTCCTTCCT
CGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACTCGAGGGGC
TTGAATTACTGGGAGGCCCCGTCTCCCCCCTCCTCCCACCCCGACGCACC
TCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGCCGTGCCAA
CATCCTCCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTCATCCTCG
AAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTCTCCGCCACCT
CCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTCCGCTCGC
AACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCGCCGCCGT
TCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGGCGAGCCACCG
GCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGGAGGCGGC
GAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTGAAGGAGC
TGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGTCCTAGAT
GCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGGGAGCTAT
GGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGATGGACTGA
GGCGCATCGGGGCGTCCAAGGAACAGGCGAGGAGAGAAGAGATGGCAGAG
GAAATGGCGAATGGGGGGTATGATGGGACACAAGACGATGATGATGAAAT
GGAGTTTTAGATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGA
TCTCCTTCCTCGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGA
CTCGAGGGGCTTGAATTACTGGGAGGCCCCGTCTCCCCCCTCCTCCCACC
CCGACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAAC
GCCGTGCCAACATCCTCCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAG
CTCATCCTCGAAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTC
TCCGCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCG
CTCCGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCT
GCGCCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGG
CGAGCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGC
TGGAGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTG
TTGAAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGA
TGTCCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTG
TGGGAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTG
GATGGACTGAGGCGCATCGGGGCGTCCAAGGAACAGGCGAGGAGAGAAGA
GATGGCAGAGGAAATGGCGAATGGGGGGTATGATGGGACACAAGACGATG
ATGATGAAATGGAGTTTTAGATGGCCTTTCCCCTCCCGCGGGGCATCACG
CCCCCGGAGATCTCCTTCCTCGCGGAGATGGAGATGGTCACCATCTTGCC
TCGTCAGCGACTCGAGGGGCTTGAATTACTGGGAGGCCCCGTCTCCCCCC
TCCTCCCACCCCGACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTC
AAACGCCAACGCCGTGCCAACATCCTCCCCCCGCCCTGGCTCCACCCCGA
ATCTCTGGAGCTCATCCTCGAAATCGAGACCCAAAACGACGAATACCAGC
ACGCCTTCTCTCCGCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGAT
CACCGTCGCGCTCCGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAA
ATACTACCCTGCGCCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACA
TCCCGCCGGGCGAGCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGG
ACGATGTTGCTGGAGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGAC
GAGACGGCTGTTGAAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGG
CGGGTGTGGATGTCCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCG
TTGACGGGTGTGGGAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGC
GGGGGTGGTGGATGGACTGAGGCGCATCGGGGCGTCCAAGGAACAGGCGA
GGAGAGAAGAGATGGCAGAGGAAATGGCGAATGGGGGGTATGATGGGACA
CAAGACGATGATGATGAAATGGAGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF2ATCC64974_61350Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61350-T1.exon1ATCC64974_61350-T1.exon1Aspergillus niger N402exon
ATCC64974_61350-T1.exon2ATCC64974_61350-T1.exon2Aspergillus niger N402exon
ATCC64974_61350-T1.exon3ATCC64974_61350-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61350-T1.cdsATCC64974_61350-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61350-T1ATCC64974_61350-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264QRY
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR021151
DBxrefInterPro:IPR007257
DBxrefPFAM:PF05916
ProductDNA replication protein psf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:776559..777504 +
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