You are here

Home

ATCC64974_61670-T1, ATCC64974_61670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61670-T1
Unique NameATCC64974_61670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:896025..897545-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61670-T1 ID=ATCC64974_61670-T1|Name=ATCC64974_61670-T1|organism=Aspergillus niger N402|type=mRNA|length=1521bp|location=Sequence derived from alignment at OGUI01000008.1:896025..897545- (Aspergillus niger N402)
ATGTTCGCCGTCCCAGGCTGGTCCCTCGAGACCTCTGCTCTCAAGCAGCA
GCAGGCCGAATCTTCCCAGAAGCAATCTTCGTCCAAGAGCTCGACTGGGG
CTAATAGCACCCCTATCATCAGTCGGGACAAGAAGCGCAAGCGCGAAGAT
CATGTCACCAAGGGTAACGTGGATGAGATGTACCGTCGGCATATTGAGGG
CCAGAAACCGACTCCCAAGGGCCAGAAGCAGAATGCGAACAACAATGGTG
TGAAGGCTGATAGGAAGTCTAAGAAGGGTGGAGATGGCCAGGGAAAGCAG
AATCAAGTGACGAAAAATCAGCCCAAAGACGAGAAGACCGAGGCTACCGG
GGAGGAAGGAAAGCCTGCCAACAAGAAGCAGAAGAAGAACAAGAACAAGA
ACAAGCAGCAAGAAGGACAGCAAGAAGTCTCAACTGAAACTCCAGCCGCC
GAGACCCTGCCTGTTGCTCCACCGAAAACAGAAGCCATTCTTACTCCTCT
CCAACAAGCTATGCGACAGAAGCTGATCTCATCCCGTTTCCGCCATCTGA
ACGAGACGCTGTACACGACACCCTCTGCCAAGGCCTTTGAGCTTTTCAGC
GCGAACCCGGAATTGTTCGACGAGTATCACGCAGGCTTCTCTCGCCAGGT
CAAGGAGTCTTGGCCTTCCAACCCTGTCGATGGCTACATCAGGGCCTTCC
GCGGTAGAGGGGCAGTCCGTGGCCCTCCCAAGAAAGGAAAGCCCGATAAC
AAGCGGAATTCCGCTCTCGCCCTTCCTCGTCGGCCCAACGGACTGTGCAC
CATTGCTGATCTTGGCTGTGGTGACGCCCAACTCGCCCGTGCCCTGTTGC
CTTCCGCCCAGAAGCTGAACCTCAAGCTTCTCAGCTACGATCTCCATGCC
CCCGAGGGCTCTCCGATCACCAAGGCAGACATCTCCAACCTCCCGTTGGC
AGACGGCTCTGTTGACGTGACTGTCTTCTGTCTCAGTCTGATGGGCACCA
ACTGGGTCTCCTTTGTGGAGGAAGCATGGCGGGTCCTGCGCAGTGACGGC
AAGGGCGAGTGCTGGGTCAGTGAAGTCAAGAGTCGCTTTGGCAAGGTGCA
CCGCAAGAAGGCACAGATCGGAGCAAAGAAGCCTCTCAGCAAGTCAGAGA
AGAAGAAGCTCAAGAAGAAGGCTGGTGATGATGAAGGCTCAGACGTGGAT
GATGCAGATATCTATGCTGAAGACGCTCGTCCGGCCGACAATGACGACGA
GACGGATATCTCTGCTTTCGTGGAGGTGTTCCGCACACGAGGCTTCCTTC
TGAAGCCCGAGTCAGTTGACAAGTCTAATAAGATGTTCGTGAAGATGGAG
TTTGTCAAGGCGGGTGGTGCTCCTACGAAGGGTAAATATGCCTCGACGGC
AGGCGCGGGTGCTGGTCCTGGAAAGAAGAGGTTCATTGACAGATCTGCTC
TTGCTGACAAGGGGATGACCGCAGAGGAAGAGGCTGCTGTTCTCAAGCCT
TGTGTCTACAAGATCCGGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:896025..897545-

>ATCC64974_61670-T1 ID=ATCC64974_61670-T1|Name=ATCC64974_61670-T1|organism=Aspergillus niger N402|type=CDS|length=1521bp|location=Sequence derived from alignment at OGUI01000008.1:896025..897545- (Aspergillus niger N402)
ATGTTCGCCGTCCCAGGCTGGTCCCTCGAGACCTCTGCTCTCAAGCAGCA
GCAGGCCGAATCTTCCCAGAAGCAATCTTCGTCCAAGAGCTCGACTGGGG
CTAATAGCACCCCTATCATCAGTCGGGACAAGAAGCGCAAGCGCGAAGAT
CATGTCACCAAGGGTAACGTGGATGAGATGTACCGTCGGCATATTGAGGG
CCAGAAACCGACTCCCAAGGGCCAGAAGCAGAATGCGAACAACAATGGTG
TGAAGGCTGATAGGAAGTCTAAGAAGGGTGGAGATGGCCAGGGAAAGCAG
AATCAAGTGACGAAAAATCAGCCCAAAGACGAGAAGACCGAGGCTACCGG
GGAGGAAGGAAAGCCTGCCAACAAGAAGCAGAAGAAGAACAAGAACAAGA
ACAAGCAGCAAGAAGGACAGCAAGAAGTCTCAACTGAAACTCCAGCCGCC
GAGACCCTGCCTGTTGCTCCACCGAAAACAGAAGCCATTCTTACTCCTCT
CCAACAAGCTATGCGACAGAAGCTGATCTCATCCCGTTTCCGCCATCTGA
ACGAGACGCTGTACACGACACCCTCTGCCAAGGCCTTTGAGCTTTTCAGC
GCGAACCCGGAATTGTTCGACGAGTATCACGCAGGCTTCTCTCGCCAGGT
CAAGGAGTCTTGGCCTTCCAACCCTGTCGATGGCTACATCAGGGCCTTCC
GCGGTAGAGGGGCAGTCCGTGGCCCTCCCAAGAAAGGAAAGCCCGATAAC
AAGCGGAATTCCGCTCTCGCCCTTCCTCGTCGGCCCAACGGACTGTGCAC
CATTGCTGATCTTGGCTGTGGTGACGCCCAACTCGCCCGTGCCCTGTTGC
CTTCCGCCCAGAAGCTGAACCTCAAGCTTCTCAGCTACGATCTCCATGCC
CCCGAGGGCTCTCCGATCACCAAGGCAGACATCTCCAACCTCCCGTTGGC
AGACGGCTCTGTTGACGTGACTGTCTTCTGTCTCAGTCTGATGGGCACCA
ACTGGGTCTCCTTTGTGGAGGAAGCATGGCGGGTCCTGCGCAGTGACGGC
AAGGGCGAGTGCTGGGTCAGTGAAGTCAAGAGTCGCTTTGGCAAGGTGCA
CCGCAAGAAGGCACAGATCGGAGCAAAGAAGCCTCTCAGCAAGTCAGAGA
AGAAGAAGCTCAAGAAGAAGGCTGGTGATGATGAAGGCTCAGACGTGGAT
GATGCAGATATCTATGCTGAAGACGCTCGTCCGGCCGACAATGACGACGA
GACGGATATCTCTGCTTTCGTGGAGGTGTTCCGCACACGAGGCTTCCTTC
TGAAGCCCGAGTCAGTTGACAAGTCTAATAAGATGTTCGTGAAGATGGAG
TTTGTCAAGGCGGGTGGTGCTCCTACGAAGGGTAAATATGCCTCGACGGC
AGGCGCGGGTGCTGGTCCTGGAAAGAAGAGGTTCATTGACAGATCTGCTC
TTGCTGACAAGGGGATGACCGCAGAGGAAGAGGCTGCTGTTCTCAAGCCT
TGTGTCTACAAGATCCGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_61670ATCC64974_61670Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61670-T1.cdsATCC64974_61670-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61670-T1.exon1ATCC64974_61670-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61670-T1ATCC64974_61670-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263YBT
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR042036
DBxrefInterPro:IPR007823
DBxrefPFAM:PF05148
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:896025..897545 -
Powered by Drupal