You are here

Home

ATCC64974_62600-T1, ATCC64974_62600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_62600-T1
Unique NameATCC64974_62600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:1172411..1174156+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_62600-T1 ID=ATCC64974_62600-T1|Name=ATCC64974_62600-T1|organism=Aspergillus niger N402|type=mRNA|length=1746bp|location=Sequence derived from alignment at OGUI01000008.1:1172411..1174156+ (Aspergillus niger N402)
ATGACGACCAAATCTAAAGATGTCGAGCTGTCTGACGACATCCAATTCAT
CGAAACTCCCGCACCAGCTCCCCCCAAGTTTGAAACCGGCGAGAGCTGTG
GAGTCGCCCTGACCAATGTCAATTCCTCCCTCCCAATTGCTGGCATATTG
CCTACCTGTCCAAAACCGTGCTGACCTCTACCAAAGGCCAAGAGTATTAA
CAATCCTCCCCTGCCGGCAGATGGTCCTGGAAACGAGAGCTTCTCCAACC
TCCTGTTGGGCGGCGCCATCATCGGAGTCCCCGGCTTTTTGACCTACCTG
CTCGGCGGTGGAAAGAAAACTTTCGTCTTCTTCACTCTGGTAACTGTTCT
ACCTGTCCTCGTGGCCTTCTGGACCTACACCTCGACCTTCAGCCCTCGCA
CCAACGAGAAAGTGAAGCTCCCTGGCCGTCCCGTTGAGCACTACATCACC
TTCAAGCGCGACGAAGACCGTGCGAAATGGAGCGGAAGGAACAAGATCCC
CATGCAAACCTTTTCGGAAATGTACCTGGACGGCCTGGTTGACTTCAACG
GCGACGTGCTTGAGATCCTGGAATACCGCCACGACTGGGCCAGCTTCGCC
TTCACCTGGGACCTGTTCAAGTTCATCGTCGGCACCTTCTTCGTCGATGT
GCTTTTCCACACCAAGGCCCAGGATGAGGAGCAAATCCGTCCCAACTACG
ACCGAGGTAACGACCACTACGCCTGGTTCCTCGGCCCTCGCATGATCTAC
ACCTCCGGAATCATCTCCGACCCCGATCGTGAAGAAACCCTGGAGGAACT
GCAGGATAACAAGATGGCTGTTGTTTGCGAGAAGATCGGCCTCAAGGAAG
GCGAGACCATGCTGGACATTGGCTGCGGCTGGGGTACTCTGGCCAAGTTC
GCCAGTCTCAACTACGGTGCAAAGGTGACCGGTCTCACTATTGCTGAGAA
CCAGACTGCCTGGGGTAACGATGCTCTCCGTAAGGCCGGCATCTCCGAGG
AACAGAGCCGCATTGTCTGCATGGATTACCGCGATATCCCCCGCACGAAA
TACGACAAGATCACTCAGCTGGAAATGGGCGAGCACGTCGGTATTCGCAA
GCTTACTGGGTTCTTCCGCCAGTGCTATGATATGCTTAACGATGATGGAT
GCATGTACGTGCAGCTTTCGGGTCTGAGACAGGCATGGCAGTACGAGGAT
TTCATCTGGGGTCTGTATCTGAACAAGTACATCTTCCGTGGCGCGGACGC
TTCTACTCCTCTGTGGTACTACGTCAAGTGTCTTGAAGGAGCTGGCTTCG
AAGTCAAGGGGTAAGCCACCTTTCCTGCCGCCCCCCTTTCACCAACCAAA
CACTAACATCAAATCTGCGAATAGTATTGACACTGTCGGCGTCCACTACT
CCGGCACCCTCTGGAGATGGTACCGCAACTGGGTCGGCAACATCGAGGCA
ATCAAGGCCAAGTACGGTCCCAGATGGTACAGGGTGCGTATATCCTCCTC
CCCTTCTCCCTCTACTTCTCCTTATTCCCAAACACCTCTAACACTGTATT
CCAACCTAAACAGATCTGGGAACTCTTCCTCGCCTGGTCCGTCATCGCCT
CCCGCCAAGGTTCCGCAACCTGCTACCAGATGGTGGTGGTCAAGAACCTG
AACTCGACGCACCGTATTACCGGAGTGTCCAACCAGTATGGTCTTATGGG
TGCTCTCGCTAAGAGCAGGGAGGCGGGCAAGTCCCGTCTGCCTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:1172411..1174156+

>ATCC64974_62600-T1 ID=ATCC64974_62600-T1|Name=ATCC64974_62600-T1|organism=Aspergillus niger N402|type=CDS|length=6132bp|location=Sequence derived from alignment at OGUI01000008.1:1172411..1174156+ (Aspergillus niger N402)
ATGACGACCAAATCTAAAGATGTCGAGCTGTCTGACGACATCCAATTCAT
CGAAACTCCCGCACCAGCTCCCCCCAAGTTTGAAACCGGCGAGAGCTGTG
GAGTCGCCCTGACCAATGCCAAGAGTATTAACAATCCTCCCCTGCCGGCA
GATGGTCCTGGAAACGAGAGCTTCTCCAACCTCCTGTTGGGCGGCGCCAT
CATCGGAGTCCCCGGCTTTTTGACCTACCTGCTCGGCGGTGGAAAGAAAA
CTTTCGTCTTCTTCACTCTGGTAACTGTTCTACCTGTCCTCGTGGCCTTC
TGGACCTACACCTCGACCTTCAGCCCTCGCACCAACGAGAAAGTGAAGCT
CCCTGGCCGTCCCGTTGAGCACTACATCACCTTCAAGCGCGACGAAGACC
GTGCGAAATGGAGCGGAAGGAACAAGATCCCCATGCAAACCTTTTCGGAA
ATGTACCTGGACGGCCTGGTTGACTTCAACGGCGACGTGCTTGAGATCCT
GGAATACCGCCACGACTGGGCCAGCTTCGCCTTCACCTGGGACCTGTTCA
AGTTCATCGTCGGCACCTTCTTCGTCGATGTGCTTTTCCACACCAAGGCC
CAGGATGAGGAGCAAATCCGTCCCAACTACGACCGAGGTAACGACCACTA
CGCCTGGTTCCTCGGCCCTCGCATGATCTACACCTCCGGAATCATCTCCG
ACCCCGATCGTGAAGAAACCCTGGAGGAACTGCAGGATAACAAGATGGCT
GTTGTTTGCGAGAAGATCGGCCTCAAGGAAGGCGAGACCATGCTGGACAT
TGGCTGCGGCTGGGGTACTCTGGCCAAGTTCGCCAGTCTCAACTACGGTG
CAAAGGTGACCGGTCTCACTATTGCTGAGAACCAGACTGCCTGGGGTAAC
GATGCTCTCCGTAAGGCCGGCATCTCCGAGGAACAGAGCCGCATTGTCTG
CATGGATTACCGCGATATCCCCCGCACGAAATACGACAAGATCACTCAGC
TGGAAATGGGCGAGCACGTCGGTATTCGCAAGCTTACTGGGTTCTTCCGC
CAGTGCTATGATATGCTTAACGATGATGGATGCATGTACGTGCAGCTTTC
GGGTCTGAGACAGGCATGGCAGTACGAGGATTTCATCTGGGGTCTGTATC
TGAACAAGTACATCTTCCGTGGCGCGGACGCTTCTACTCCTCTGTGGTAC
TACGTCAAGTGTCTTGAAGGAGCTGGCTTCGAAGTCAAGGGTATTGACAC
TGTCGGCGTCCACTACTCCGGCACCCTCTGGAGATGGTACCGCAACTGGG
TCGGCAACATCGAGGCAATCAAGGCCAAGTACGGTCCCAGATGGTACAGG
ATCTGGGAACTCTTCCTCGCCTGGTCCGTCATCGCCTCCCGCCAAGGTTC
CGCAACCTGCTACCAGATGGTGGTGGTCAAGAACCTGAACTCGACGCACC
GTATTACCGGAGTGTCCAACCAGTATGGTCTTATGGGTGCTCTCGCTAAG
AGCAGGGAGGCGGGCAAGTCCCGTCTGCCTTAGATGACGACCAAATCTAA
AGATGTCGAGCTGTCTGACGACATCCAATTCATCGAAACTCCCGCACCAG
CTCCCCCCAAGTTTGAAACCGGCGAGAGCTGTGGAGTCGCCCTGACCAAT
GCCAAGAGTATTAACAATCCTCCCCTGCCGGCAGATGGTCCTGGAAACGA
GAGCTTCTCCAACCTCCTGTTGGGCGGCGCCATCATCGGAGTCCCCGGCT
TTTTGACCTACCTGCTCGGCGGTGGAAAGAAAACTTTCGTCTTCTTCACT
CTGGTAACTGTTCTACCTGTCCTCGTGGCCTTCTGGACCTACACCTCGAC
CTTCAGCCCTCGCACCAACGAGAAAGTGAAGCTCCCTGGCCGTCCCGTTG
AGCACTACATCACCTTCAAGCGCGACGAAGACCGTGCGAAATGGAGCGGA
AGGAACAAGATCCCCATGCAAACCTTTTCGGAAATGTACCTGGACGGCCT
GGTTGACTTCAACGGCGACGTGCTTGAGATCCTGGAATACCGCCACGACT
GGGCCAGCTTCGCCTTCACCTGGGACCTGTTCAAGTTCATCGTCGGCACC
TTCTTCGTCGATGTGCTTTTCCACACCAAGGCCCAGGATGAGGAGCAAAT
CCGTCCCAACTACGACCGAGGTAACGACCACTACGCCTGGTTCCTCGGCC
CTCGCATGATCTACACCTCCGGAATCATCTCCGACCCCGATCGTGAAGAA
ACCCTGGAGGAACTGCAGGATAACAAGATGGCTGTTGTTTGCGAGAAGAT
CGGCCTCAAGGAAGGCGAGACCATGCTGGACATTGGCTGCGGCTGGGGTA
CTCTGGCCAAGTTCGCCAGTCTCAACTACGGTGCAAAGGTGACCGGTCTC
ACTATTGCTGAGAACCAGACTGCCTGGGGTAACGATGCTCTCCGTAAGGC
CGGCATCTCCGAGGAACAGAGCCGCATTGTCTGCATGGATTACCGCGATA
TCCCCCGCACGAAATACGACAAGATCACTCAGCTGGAAATGGGCGAGCAC
GTCGGTATTCGCAAGCTTACTGGGTTCTTCCGCCAGTGCTATGATATGCT
TAACGATGATGGATGCATGTACGTGCAGCTTTCGGGTCTGAGACAGGCAT
GGCAGTACGAGGATTTCATCTGGGGTCTGTATCTGAACAAGTACATCTTC
CGTGGCGCGGACGCTTCTACTCCTCTGTGGTACTACGTCAAGTGTCTTGA
AGGAGCTGGCTTCGAAGTCAAGGGTATTGACACTGTCGGCGTCCACTACT
CCGGCACCCTCTGGAGATGGTACCGCAACTGGGTCGGCAACATCGAGGCA
ATCAAGGCCAAGTACGGTCCCAGATGGTACAGGATCTGGGAACTCTTCCT
CGCCTGGTCCGTCATCGCCTCCCGCCAAGGTTCCGCAACCTGCTACCAGA
TGGTGGTGGTCAAGAACCTGAACTCGACGCACCGTATTACCGGAGTGTCC
AACCAGTATGGTCTTATGGGTGCTCTCGCTAAGAGCAGGGAGGCGGGCAA
GTCCCGTCTGCCTTAGATGACGACCAAATCTAAAGATGTCGAGCTGTCTG
ACGACATCCAATTCATCGAAACTCCCGCACCAGCTCCCCCCAAGTTTGAA
ACCGGCGAGAGCTGTGGAGTCGCCCTGACCAATGCCAAGAGTATTAACAA
TCCTCCCCTGCCGGCAGATGGTCCTGGAAACGAGAGCTTCTCCAACCTCC
TGTTGGGCGGCGCCATCATCGGAGTCCCCGGCTTTTTGACCTACCTGCTC
GGCGGTGGAAAGAAAACTTTCGTCTTCTTCACTCTGGTAACTGTTCTACC
TGTCCTCGTGGCCTTCTGGACCTACACCTCGACCTTCAGCCCTCGCACCA
ACGAGAAAGTGAAGCTCCCTGGCCGTCCCGTTGAGCACTACATCACCTTC
AAGCGCGACGAAGACCGTGCGAAATGGAGCGGAAGGAACAAGATCCCCAT
GCAAACCTTTTCGGAAATGTACCTGGACGGCCTGGTTGACTTCAACGGCG
ACGTGCTTGAGATCCTGGAATACCGCCACGACTGGGCCAGCTTCGCCTTC
ACCTGGGACCTGTTCAAGTTCATCGTCGGCACCTTCTTCGTCGATGTGCT
TTTCCACACCAAGGCCCAGGATGAGGAGCAAATCCGTCCCAACTACGACC
GAGGTAACGACCACTACGCCTGGTTCCTCGGCCCTCGCATGATCTACACC
TCCGGAATCATCTCCGACCCCGATCGTGAAGAAACCCTGGAGGAACTGCA
GGATAACAAGATGGCTGTTGTTTGCGAGAAGATCGGCCTCAAGGAAGGCG
AGACCATGCTGGACATTGGCTGCGGCTGGGGTACTCTGGCCAAGTTCGCC
AGTCTCAACTACGGTGCAAAGGTGACCGGTCTCACTATTGCTGAGAACCA
GACTGCCTGGGGTAACGATGCTCTCCGTAAGGCCGGCATCTCCGAGGAAC
AGAGCCGCATTGTCTGCATGGATTACCGCGATATCCCCCGCACGAAATAC
GACAAGATCACTCAGCTGGAAATGGGCGAGCACGTCGGTATTCGCAAGCT
TACTGGGTTCTTCCGCCAGTGCTATGATATGCTTAACGATGATGGATGCA
TGTACGTGCAGCTTTCGGGTCTGAGACAGGCATGGCAGTACGAGGATTTC
ATCTGGGGTCTGTATCTGAACAAGTACATCTTCCGTGGCGCGGACGCTTC
TACTCCTCTGTGGTACTACGTCAAGTGTCTTGAAGGAGCTGGCTTCGAAG
TCAAGGGTATTGACACTGTCGGCGTCCACTACTCCGGCACCCTCTGGAGA
TGGTACCGCAACTGGGTCGGCAACATCGAGGCAATCAAGGCCAAGTACGG
TCCCAGATGGTACAGGATCTGGGAACTCTTCCTCGCCTGGTCCGTCATCG
CCTCCCGCCAAGGTTCCGCAACCTGCTACCAGATGGTGGTGGTCAAGAAC
CTGAACTCGACGCACCGTATTACCGGAGTGTCCAACCAGTATGGTCTTAT
GGGTGCTCTCGCTAAGAGCAGGGAGGCGGGCAAGTCCCGTCTGCCTTAGA
TGACGACCAAATCTAAAGATGTCGAGCTGTCTGACGACATCCAATTCATC
GAAACTCCCGCACCAGCTCCCCCCAAGTTTGAAACCGGCGAGAGCTGTGG
AGTCGCCCTGACCAATGCCAAGAGTATTAACAATCCTCCCCTGCCGGCAG
ATGGTCCTGGAAACGAGAGCTTCTCCAACCTCCTGTTGGGCGGCGCCATC
ATCGGAGTCCCCGGCTTTTTGACCTACCTGCTCGGCGGTGGAAAGAAAAC
TTTCGTCTTCTTCACTCTGGTAACTGTTCTACCTGTCCTCGTGGCCTTCT
GGACCTACACCTCGACCTTCAGCCCTCGCACCAACGAGAAAGTGAAGCTC
CCTGGCCGTCCCGTTGAGCACTACATCACCTTCAAGCGCGACGAAGACCG
TGCGAAATGGAGCGGAAGGAACAAGATCCCCATGCAAACCTTTTCGGAAA
TGTACCTGGACGGCCTGGTTGACTTCAACGGCGACGTGCTTGAGATCCTG
GAATACCGCCACGACTGGGCCAGCTTCGCCTTCACCTGGGACCTGTTCAA
GTTCATCGTCGGCACCTTCTTCGTCGATGTGCTTTTCCACACCAAGGCCC
AGGATGAGGAGCAAATCCGTCCCAACTACGACCGAGGTAACGACCACTAC
GCCTGGTTCCTCGGCCCTCGCATGATCTACACCTCCGGAATCATCTCCGA
CCCCGATCGTGAAGAAACCCTGGAGGAACTGCAGGATAACAAGATGGCTG
TTGTTTGCGAGAAGATCGGCCTCAAGGAAGGCGAGACCATGCTGGACATT
GGCTGCGGCTGGGGTACTCTGGCCAAGTTCGCCAGTCTCAACTACGGTGC
AAAGGTGACCGGTCTCACTATTGCTGAGAACCAGACTGCCTGGGGTAACG
ATGCTCTCCGTAAGGCCGGCATCTCCGAGGAACAGAGCCGCATTGTCTGC
ATGGATTACCGCGATATCCCCCGCACGAAATACGACAAGATCACTCAGCT
GGAAATGGGCGAGCACGTCGGTATTCGCAAGCTTACTGGGTTCTTCCGCC
AGTGCTATGATATGCTTAACGATGATGGATGCATGTACGTGCAGCTTTCG
GGTCTGAGACAGGCATGGCAGTACGAGGATTTCATCTGGGGTCTGTATCT
GAACAAGTACATCTTCCGTGGCGCGGACGCTTCTACTCCTCTGTGGTACT
ACGTCAAGTGTCTTGAAGGAGCTGGCTTCGAAGTCAAGGGTATTGACACT
GTCGGCGTCCACTACTCCGGCACCCTCTGGAGATGGTACCGCAACTGGGT
CGGCAACATCGAGGCAATCAAGGCCAAGTACGGTCCCAGATGGTACAGGA
TCTGGGAACTCTTCCTCGCCTGGTCCGTCATCGCCTCCCGCCAAGGTTCC
GCAACCTGCTACCAGATGGTGGTGGTCAAGAACCTGAACTCGACGCACCG
TATTACCGGAGTGTCCAACCAGTATGGTCTTATGGGTGCTCTCGCTAAGA
GCAGGGAGGCGGGCAAGTCCCGTCTGCCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008610lipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MT1ATCC64974_62600Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_62600-T1.exon1ATCC64974_62600-T1.exon1Aspergillus niger N402exon
ATCC64974_62600-T1.exon2ATCC64974_62600-T1.exon2Aspergillus niger N402exon
ATCC64974_62600-T1.exon3ATCC64974_62600-T1.exon3Aspergillus niger N402exon
ATCC64974_62600-T1.exon4ATCC64974_62600-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_62600-T1.cdsATCC64974_62600-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_62600-T1ATCC64974_62600-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR003333
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
DBxrefPFAM:PF02353
ProductSphingolipid C9-methyltransferase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:1172411..1174156 +
Powered by Drupal