You are here

Home

ATCC64974_63260-T1, ATCC64974_63260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_63260-T1
Unique NameATCC64974_63260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:54237..54761-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_63260-T1 ID=ATCC64974_63260-T1|Name=ATCC64974_63260-T1|organism=Aspergillus niger N402|type=mRNA|length=525bp|location=Sequence derived from alignment at OGUI01000010.1:54237..54761- (Aspergillus niger N402)
ATGCGATTCCTACAGACCGCTTTCGTGGCTATCAGCCTTGCCGTTTACCC
CACTGTAATGGCCCAGCAACTACAGGGCCAGGGGTCTGTTCAAGTCATCT
CCGACGATGGGATAACCTTTCGTGGATGCCTCGATGATGTTGGCGCATGG
TCCTCTAACTTCTGTGGTGGAATTACCATCGTTGGGGATGGGTATCTTAG
TACCAACCATGGATATCTCACGCTCACCGAGTCGTTGGAAATCACTGTGA
CCCCGGATGTTGCAGACGCCGCATACTGGCAAGCCACCGACTACAGTTCT
TTTGTGAGTGGATAGTATAGGCCTTCACATTGTTCAATTACTGATTAATC
TTGCATACAGGGCCAACCAACCCGACTTGTTGCTGATGGGGGCATTGAGC
AAAATGGGGGAGGTGGTCCGTACTGGTATGGCGCCGCCGATCCTGAGGAG
GAGGATGTCCCGCTCACTGCGCTGGAAGCCGATGGAGATCAGCGTGTGAT
CCTTGCCTGGACTCAAGTGAATTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:54237..54761-

>ATCC64974_63260-T1 ID=ATCC64974_63260-T1|Name=ATCC64974_63260-T1|organism=Aspergillus niger N402|type=CDS|length=936bp|location=Sequence derived from alignment at OGUI01000010.1:54237..54761- (Aspergillus niger N402)
GGCCAACCAACCCGACTTGTTGCTGATGGGGGCATTGAGCAAAATGGGGG
AGGTGGTCCGTACTGGTATGGCGCCGCCGATCCTGAGGAGGAGGATGTCC
CGCTCACTGCGCTGGAAGCCGATGGAGATCAGCGTGTGATCCTTGCCTGG
ACTCAAGTGAATTAGATGCGATTCCTACAGACCGCTTTCGTGGCTATCAG
CCTTGCCGTTTACCCCACTGTAATGGCCCAGCAACTACAGGGCCAGGGGT
CTGTTCAAGTCATCTCCGACGATGGGATAACCTTTCGTGGATGCCTCGAT
GATGTTGGCGCATGGTCCTCTAACTTCTGTGGTGGAATTACCATCGTTGG
GGATGGGTATCTTAGTACCAACCATGGATATCTCACGCTCACCGAGTCGT
TGGAAATCACTGTGACCCCGGATGTTGCAGACGCCGCATACTGGCAAGCC
ACCGACTACAGTTCTTTTGGCCAACCAACCCGACTTGTTGCTGATGGGGG
CATTGAGCAAAATGGGGGAGGTGGTCCGTACTGGTATGGCGCCGCCGATC
CTGAGGAGGAGGATGTCCCGCTCACTGCGCTGGAAGCCGATGGAGATCAG
CGTGTGATCCTTGCCTGGACTCAAGTGAATTAGATGCGATTCCTACAGAC
CGCTTTCGTGGCTATCAGCCTTGCCGTTTACCCCACTGTAATGGCCCAGC
AACTACAGGGCCAGGGGTCTGTTCAAGTCATCTCCGACGATGGGATAACC
TTTCGTGGATGCCTCGATGATGTTGGCGCATGGTCCTCTAACTTCTGTGG
TGGAATTACCATCGTTGGGGATGGGTATCTTAGTACCAACCATGGATATC
TCACGCTCACCGAGTCGTTGGAAATCACTGTGACCCCGGATGTTGCAGAC
GCCGCATACTGGCAAGCCACCGACTACAGTTCTTTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_63260ATCC64974_63260Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63260-T1ATCC64974_63260-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63260-T1.cdsATCC64974_63260-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63260-T1.exon2ATCC64974_63260-T1.exon2Aspergillus niger N402exon
ATCC64974_63260-T1.exon1ATCC64974_63260-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.1
NoteSECRETED:SignalP(1-21)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:54237..54761 -
Powered by Drupal