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ATCC64974_63470-T1, ATCC64974_63470-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_63470-T1
Unique NameATCC64974_63470-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:114006..115265+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_63470-T1 ID=ATCC64974_63470-T1|Name=ATCC64974_63470-T1|organism=Aspergillus niger N402|type=mRNA|length=1260bp|location=Sequence derived from alignment at OGUI01000010.1:114006..115265+ (Aspergillus niger N402)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTCTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGCTCGGCTCAGGCTGCTAGTC
TCCTTCAGGGCTTTGCTTTTGGTGGTGGCACTGCCCCGGATGCATCTGTC
AGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATATCGA
GGATATCGTAGAGCCGCCGGCGAAACGTCGCAAGAGTGCTTTGAGCAGTT
CTGTCACGAGGACGAGTGCGCGCTCTACTCGGAGGGCTGTCAAAGCAGAG
CCCCCTGTCAAAGAGGAGGCGCCTGTCAAAGAGGAAGCACCTGTCAAGGA
AGAGCCGGTCGAGAAGCCGCAAAAGGCACGACGGATGCCCGCGCGCAAGA
TCAAAATCGAGAATGGCGGTTATTCCATGGAGCCGCCGTCTAACTGGGAG
ACTATGTATGACATGGTCAAGAAGATGCGAGAGGCAAATCCCACTGCACC
CGTTGACACCATGGGCTGTGCCGAACTCTACTGGCGTGCATCCTCTCCGC
GCGATCGCCGTTTCCAGACTCTCATCGCGCTAATGCTATCATCCCAGACC
AAGGACACAGTCACGGCGGTGGCCATGCAGCGGTTGCACACGGAGCTTGG
AGACCAGTCGACAACCATTGTGAAGAAGGAGCCCGAAGATTATGACTGGA
AGCCCACGGACCAGGTCAAGGACAGCACTTTGAACCTGGAGAACATCCTA
GCCGTCACCCCTGAGCGCCTGAACGAACTTATTGCCAAGGTGGGCTTCCA
CAACAACAAGACCAAGTATATCAAGGCCGCGGCCATCATCCTCCGCGATC
AATATGACTCCGATATCCCGTCGACTGCTCCTGAACTGATGAAGCTCCCG
GGCGTCGGTCCGAAGATGGCGTTTCTCTGTATGAGCGCGGCGTGGGGCAA
GCACGAAGGCATTGGCGTTGATGTTCACGTTCACCGGATTACCAACCTCT
GGGGCTGGCACAAGACGAAGAATCCCGAGGAAACTCGCATGGCGCTGGAG
TCGTGGCTACCAAAAGACAAGTGGCACGAGATCAACAAACTCTTGGTCGG
CCTAGGACAGACGGTCTGCTTACCTGTAGCCCGGAGATGCGGAGAATGCG
ATCTTGCAGGAACGAAGCTCTGTAAGAGCGAAATCAAGGGTCTGGTAACA
CTGAAGCGAGACGCTGCTGTGAAGCAGGAGGAGCCGAAGGTGAAGGTCGA
GCAGGAGTAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:114006..115265+

>ATCC64974_63470-T1 ID=ATCC64974_63470-T1|Name=ATCC64974_63470-T1|organism=Aspergillus niger N402|type=CDS|length=1260bp|location=Sequence derived from alignment at OGUI01000010.1:114006..115265+ (Aspergillus niger N402)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTCTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGCTCGGCTCAGGCTGCTAGTC
TCCTTCAGGGCTTTGCTTTTGGTGGTGGCACTGCCCCGGATGCATCTGTC
AGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATATCGA
GGATATCGTAGAGCCGCCGGCGAAACGTCGCAAGAGTGCTTTGAGCAGTT
CTGTCACGAGGACGAGTGCGCGCTCTACTCGGAGGGCTGTCAAAGCAGAG
CCCCCTGTCAAAGAGGAGGCGCCTGTCAAAGAGGAAGCACCTGTCAAGGA
AGAGCCGGTCGAGAAGCCGCAAAAGGCACGACGGATGCCCGCGCGCAAGA
TCAAAATCGAGAATGGCGGTTATTCCATGGAGCCGCCGTCTAACTGGGAG
ACTATGTATGACATGGTCAAGAAGATGCGAGAGGCAAATCCCACTGCACC
CGTTGACACCATGGGCTGTGCCGAACTCTACTGGCGTGCATCCTCTCCGC
GCGATCGCCGTTTCCAGACTCTCATCGCGCTAATGCTATCATCCCAGACC
AAGGACACAGTCACGGCGGTGGCCATGCAGCGGTTGCACACGGAGCTTGG
AGACCAGTCGACAACCATTGTGAAGAAGGAGCCCGAAGATTATGACTGGA
AGCCCACGGACCAGGTCAAGGACAGCACTTTGAACCTGGAGAACATCCTA
GCCGTCACCCCTGAGCGCCTGAACGAACTTATTGCCAAGGTGGGCTTCCA
CAACAACAAGACCAAGTATATCAAGGCCGCGGCCATCATCCTCCGCGATC
AATATGACTCCGATATCCCGTCGACTGCTCCTGAACTGATGAAGCTCCCG
GGCGTCGGTCCGAAGATGGCGTTTCTCTGTATGAGCGCGGCGTGGGGCAA
GCACGAAGGCATTGGCGTTGATGTTCACGTTCACCGGATTACCAACCTCT
GGGGCTGGCACAAGACGAAGAATCCCGAGGAAACTCGCATGGCGCTGGAG
TCGTGGCTACCAAAAGACAAGTGGCACGAGATCAACAAACTCTTGGTCGG
CCTAGGACAGACGGTCTGCTTACCTGTAGCCCGGAGATGCGGAGAATGCG
ATCTTGCAGGAACGAAGCTCTGTAAGAGCGAAATCAAGGGTCTGGTAACA
CTGAAGCGAGACGCTGCTGTGAAGCAGGAGGAGCCGAAGGTGAAGGTCGA
GCAGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0019104DNA N-glycosylase activity
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006285base-excision repair, AP site formation
GO:0006281DNA repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTH1ATCC64974_63470Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63470-T1.exon1ATCC64974_63470-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63470-T1.cdsATCC64974_63470-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63470-T1ATCC64974_63470-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263R4M
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR030841
DBxrefInterPro:IPR004036
DBxrefInterPro:IPR000445
DBxrefInterPro:IPR023170
DBxrefInterPro:IPR003265
DBxrefPFAM:PF00730
DBxrefPFAM:PF00633
Productalpha-trehalase nth1
Productalpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:114006..115265 +
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