You are here

Home

ATCC64974_63870-T1, ATCC64974_63870-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_63870-T1
Unique NameATCC64974_63870-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:233915..235056+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_63870-T1 ID=ATCC64974_63870-T1|Name=ATCC64974_63870-T1|organism=Aspergillus niger N402|type=mRNA|length=1142bp|location=Sequence derived from alignment at OGUI01000010.1:233915..235056+ (Aspergillus niger N402)
ATGGCCCATAATCTTTCCATCGCTGGCGTGCAGCTTGAGCTCTCCCAGGC
CACCGCAGGATTCGAATACTACGACAGTCGATTCCTCAACATCACGGGCA
ATGCCCCAAAACTTGAAGTTCTTCTAGAGAACAATGACTTCCCATTCGCT
CACGAAGCAAGTGTCTTCATCCCATCCACAGACGAACTATTCATGAGCAG
CAACATCTTCACCGATCCCCTCACCAATCAGTCAACAATCGAGATCTCTA
AAGTGTCCCTCAGCACCAACCCAGTTACATCAGAAATAATCAACACCACC
ATTCCTCTGCCCAATGGAGGCATCAACCACGACTCCGGCATTCTCTTCTG
CGGTCAGGGTACACTCAACAAATCCGGAGGTCTTTTCCAAATGTCTATTG
ACCCGCCATATGAATCTAAGCTCCTGATCAGTGGTTTCTACGGTCGGGAA
TTCAATTCCCTAAATGATGTGGTTGTTCACAGCGACGGCTCCATCTGGTT
CACAGATCCTACGTACGGATACGAACAGGGCATCCGGCCTGCGCCGCAAT
TGCCGAACCAAGTCTATCGTTATGATCCGAGTACCGGGGATGTGCGTGTC
ATCGCGGATGGGTTTGGTCGCCCGAATGGCATCGCTTTTTCTCCGGATGA
GAAAGTAGTGTATATTACTGATACGGCGTATACGGTTGGTGATGGAACGA
CGGATCCGACTAAGCCTTCCACTATGTATGTTCTTTTCTTTCCTTTCCTG
ATAGTTCCTTCTCCACTCTTCCAAATACTCGAAAGCATGGTATACTATTT
TACGTTTATAGTTTGGCTGATATGGAACCATCCAGCTATGCATTCGACAT
CACCAACTACCACGGCCAACCATTCCTGACGAACCGTCGCGTTTTCGCGA
TGGTGGCTAACGGTATCCCGGATGGGATCAAGACCGATATGGAAGGCAAT
GTGTACGCTGGCTGCGGGGACGGTGTCAATGTCTGGTCGCCCGGTGGTGT
CTTGTTAGGGAAGATTTACATCAAGAGCGGCGTGGCTAATTTTTCATTTG
GCCGCAATGGGCAAATGTTTATTATGAACGAGAATAAACTGTTGTCTGCA
CAGCTTGGCCATTGGGTAAGGGGATCGCTCTTGAAAATTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:233915..235056+

>ATCC64974_63870-T1 ID=ATCC64974_63870-T1|Name=ATCC64974_63870-T1|organism=Aspergillus niger N402|type=CDS|length=2112bp|location=Sequence derived from alignment at OGUI01000010.1:233915..235056+ (Aspergillus niger N402)
ATGGCCCATAATCTTTCCATCGCTGGCGTGCAGCTTGAGCTCTCCCAGGC
CACCGCAGGATTCGAATACTACGACAGTCGATTCCTCAACATCACGGGCA
ATGCCCCAAAACTTGAAGTTCTTCTAGAGAACAATGACTTCCCATTCGCT
CACGAAGCAAGTGTCTTCATCCCATCCACAGACGAACTATTCATGAGCAG
CAACATCTTCACCGATCCCCTCACCAATCAGTCAACAATCGAGATCTCTA
AAGTGTCCCTCAGCACCAACCCAGTTACATCAGAAATAATCAACACCACC
ATTCCTCTGCCCAATGGAGGCATCAACCACGACTCCGGCATTCTCTTCTG
CGGTCAGGGTACACTCAACAAATCCGGAGGTCTTTTCCAAATGTCTATTG
ACCCGCCATATGAATCTAAGCTCCTGATCAGTGGTTTCTACGGTCGGGAA
TTCAATTCCCTAAATGATGTGGTTGTTCACAGCGACGGCTCCATCTGGTT
CACAGATCCTACGTACGGATACGAACAGGGCATCCGGCCTGCGCCGCAAT
TGCCGAACCAAGTCTATCGTTATGATCCGAGTACCGGGGATGTGCGTGTC
ATCGCGGATGGGTTTGGTCGCCCGAATGGCATCGCTTTTTCTCCGGATGA
GAAAGTAGTGTATATTACTGATACGGCGTATACGGTTGGTGATGGAACGA
CGGATCCGACTAAGCCTTCCACTATTTTGGCTGATATGGAACCATCCAGC
TATGCATTCGACATCACCAACTACCACGGCCAACCATTCCTGACGAACCG
TCGCGTTTTCGCGATGGTGGCTAACGGTATCCCGGATGGGATCAAGACCG
ATATGGAAGGCAATGTGTACGCTGGCTGCGGGGACGGTGTCAATGTCTGG
TCGCCCGGTGGTGTCTTGTTAGGGAAGATTTACATCAAGAGCGGCGTGGC
TAATTTTTCATTTGGCCGCAATGGGCAAATGTTTATTATGAACGAGAATA
AACTGTTGTCTGCACAGCTTGGCCATTGGGTAAGGGGATCGCTCTTGAAA
ATTTGAATGGCCCATAATCTTTCCATCGCTGGCGTGCAGCTTGAGCTCTC
CCAGGCCACCGCAGGATTCGAATACTACGACAGTCGATTCCTCAACATCA
CGGGCAATGCCCCAAAACTTGAAGTTCTTCTAGAGAACAATGACTTCCCA
TTCGCTCACGAAGCAAGTGTCTTCATCCCATCCACAGACGAACTATTCAT
GAGCAGCAACATCTTCACCGATCCCCTCACCAATCAGTCAACAATCGAGA
TCTCTAAAGTGTCCCTCAGCACCAACCCAGTTACATCAGAAATAATCAAC
ACCACCATTCCTCTGCCCAATGGAGGCATCAACCACGACTCCGGCATTCT
CTTCTGCGGTCAGGGTACACTCAACAAATCCGGAGGTCTTTTCCAAATGT
CTATTGACCCGCCATATGAATCTAAGCTCCTGATCAGTGGTTTCTACGGT
CGGGAATTCAATTCCCTAAATGATGTGGTTGTTCACAGCGACGGCTCCAT
CTGGTTCACAGATCCTACGTACGGATACGAACAGGGCATCCGGCCTGCGC
CGCAATTGCCGAACCAAGTCTATCGTTATGATCCGAGTACCGGGGATGTG
CGTGTCATCGCGGATGGGTTTGGTCGCCCGAATGGCATCGCTTTTTCTCC
GGATGAGAAAGTAGTGTATATTACTGATACGGCGTATACGGTTGGTGATG
GAACGACGGATCCGACTAAGCCTTCCACTATTTTGGCTGATATGGAACCA
TCCAGCTATGCATTCGACATCACCAACTACCACGGCCAACCATTCCTGAC
GAACCGTCGCGTTTTCGCGATGGTGGCTAACGGTATCCCGGATGGGATCA
AGACCGATATGGAAGGCAATGTGTACGCTGGCTGCGGGGACGGTGTCAAT
GTCTGGTCGCCCGGTGGTGTCTTGTTAGGGAAGATTTACATCAAGAGCGG
CGTGGCTAATTTTTCATTTGGCCGCAATGGGCAAATGTTTATTATGAACG
AGAATAAACTGTTGTCTGCACAGCTTGGCCATTGGGTAAGGGGATCGCTC
TTGAAAATTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_63870ATCC64974_63870Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63870-T1.exon1ATCC64974_63870-T1.exon1Aspergillus niger N402exon
ATCC64974_63870-T1.exon2ATCC64974_63870-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63870-T1.cdsATCC64974_63870-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_63870-T1ATCC64974_63870-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013658
DBxrefInterPro:IPR011042
DBxrefPFAM:PF03088
DBxrefPFAM:PF08450
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:233915..235056 +
Powered by Drupal