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ATCC64974_64170-T1, ATCC64974_64170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_64170-T1
Unique NameATCC64974_64170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:317277..318836+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_64170-T1 ID=ATCC64974_64170-T1|Name=ATCC64974_64170-T1|organism=Aspergillus niger N402|type=mRNA|length=1560bp|location=Sequence derived from alignment at OGUI01000010.1:317277..318836+ (Aspergillus niger N402)
ATGTCGTCGCAAGATCCTCACCGCGCCGACGACGACGCCTACATTGAAGC
CGATGAAGCTGATGAGGTTATCAACCGCGATGAGGACCACCCCATGGAGT
CCGATGCCGAGGACGAGGATGGAGACCAGCCTATGAGCTACGAAGAACAA
GAAATCACTCTGGAGAATGACTCTTCCGCCCATTTCGATAGCCACAACGA
CTCCGTTTTCTGCATTGCCCAGCACCCCATCCACAACAACATCGTAATCA
CTGGCTCCGGAGACGATACCGCTTACATCTTCGATTCGACGCCTAATGAT
GAGCGCCCCGTCCTTCCCCCCAGCTACGAATCGGACCCGCAACCCAGGCG
CGAGCGGGATTCTCTTAAGCCCATCCTTAAGCTTGAGGGCCACGCCGACA
CCGTGAACGCCGTCGCATTCACAGAACCCAAGGGCGAGTTTGTTGTCACA
GCAGGAATGGATGGTAAGCTGCGTGCTTACCGCGACACTACCCCCCAGGG
AACCGGCCTCGCATGGCAGTTCCTCGCGGAGGTTCAAGAAGTGGAGGAGA
TCAACTGGGTTGCTGTCTGCCCTTGCGAGAAGGGCGACGAGGAGAAGAGC
AACATCATTGCTCTGGGTGCCAACGACGGTAGCGCTTGGGTGTTCCGCAT
CGACCCCAGGGACGCCGCGGCTCCTATCTCCATCATTCAGTCGTTCTTCC
AACACACCGGTTCTTGCACGGCGGGTGCCTGGACCCCCGATGGAAAGCTG
CTGGCGACCGTCTCCGAGGACGGTAGCTTCTACGTCTACGATGTCTTTGG
TGCCGCTGCCGCTGCTGGCGTCTCCTACTCCCCGGGTACTAGCGCTGTTG
TCGGTCTGACTGCGGAGGACCAGCGCTTCGCCGTCGAGGGTGGTCTGTAC
TCGATCGCCATCTCCCCGGGTGGTGCTATCGCCGCTGTTGGTGGTGCTGA
GGGCAATATCAAGGTCGTCGGTCTTCCCCGTTTGGCGCCGGCTGGCGGTG
CCGCTGCTTCCAAGGCGAAGGGCAAGGGCGCTGCTTCACAGGCGACTGCC
TCCGCTGCCGGCACTCTCCTCGCCTCTCTCCAGGCTCAGAGTGACGGTGT
TGAGACTCTCTCTTTCTCTTCCCCTCCTCTGACCCTTCTTGCGGCTGGCT
CCGTGGACGGCTCGATCGCCCTGTTCGACGCTGCCCATCGCTTCGCAGTC
CGTCGTCACATCAAGGAGGCGCACGAGGGCGCCGTGGTTAAGGTTGAGTT
CCTGCAGAGCCGTGCTCCTGCCACCCCCTTGCCTCGTCCCAGCCCGCTGG
CTGCCGCGACGGCCGGCCAAGGCCAACCGTGGCTGCTCACCTCCGTGGGT
ATGGATGGTATTGTCAGACGCTGGGATGCTCGTGGAGGAACTGCGGCTGC
TGCCCAGGGTTTGTTGAAAGAGTGGAAGGGCCACTTGGGTCTTGTTGAGA
ACTCGGAGGGTGAACAATCTGGCGGTATCATGGGCTTTGTCCAGAGCTCG
GATGGTAAGCGGGTTGTTACGGCCGGTGATGACGGTATTACTCTGGTATT
TGAGCAGTAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:317277..318836+

>ATCC64974_64170-T1 ID=ATCC64974_64170-T1|Name=ATCC64974_64170-T1|organism=Aspergillus niger N402|type=CDS|length=1560bp|location=Sequence derived from alignment at OGUI01000010.1:317277..318836+ (Aspergillus niger N402)
ATGTCGTCGCAAGATCCTCACCGCGCCGACGACGACGCCTACATTGAAGC
CGATGAAGCTGATGAGGTTATCAACCGCGATGAGGACCACCCCATGGAGT
CCGATGCCGAGGACGAGGATGGAGACCAGCCTATGAGCTACGAAGAACAA
GAAATCACTCTGGAGAATGACTCTTCCGCCCATTTCGATAGCCACAACGA
CTCCGTTTTCTGCATTGCCCAGCACCCCATCCACAACAACATCGTAATCA
CTGGCTCCGGAGACGATACCGCTTACATCTTCGATTCGACGCCTAATGAT
GAGCGCCCCGTCCTTCCCCCCAGCTACGAATCGGACCCGCAACCCAGGCG
CGAGCGGGATTCTCTTAAGCCCATCCTTAAGCTTGAGGGCCACGCCGACA
CCGTGAACGCCGTCGCATTCACAGAACCCAAGGGCGAGTTTGTTGTCACA
GCAGGAATGGATGGTAAGCTGCGTGCTTACCGCGACACTACCCCCCAGGG
AACCGGCCTCGCATGGCAGTTCCTCGCGGAGGTTCAAGAAGTGGAGGAGA
TCAACTGGGTTGCTGTCTGCCCTTGCGAGAAGGGCGACGAGGAGAAGAGC
AACATCATTGCTCTGGGTGCCAACGACGGTAGCGCTTGGGTGTTCCGCAT
CGACCCCAGGGACGCCGCGGCTCCTATCTCCATCATTCAGTCGTTCTTCC
AACACACCGGTTCTTGCACGGCGGGTGCCTGGACCCCCGATGGAAAGCTG
CTGGCGACCGTCTCCGAGGACGGTAGCTTCTACGTCTACGATGTCTTTGG
TGCCGCTGCCGCTGCTGGCGTCTCCTACTCCCCGGGTACTAGCGCTGTTG
TCGGTCTGACTGCGGAGGACCAGCGCTTCGCCGTCGAGGGTGGTCTGTAC
TCGATCGCCATCTCCCCGGGTGGTGCTATCGCCGCTGTTGGTGGTGCTGA
GGGCAATATCAAGGTCGTCGGTCTTCCCCGTTTGGCGCCGGCTGGCGGTG
CCGCTGCTTCCAAGGCGAAGGGCAAGGGCGCTGCTTCACAGGCGACTGCC
TCCGCTGCCGGCACTCTCCTCGCCTCTCTCCAGGCTCAGAGTGACGGTGT
TGAGACTCTCTCTTTCTCTTCCCCTCCTCTGACCCTTCTTGCGGCTGGCT
CCGTGGACGGCTCGATCGCCCTGTTCGACGCTGCCCATCGCTTCGCAGTC
CGTCGTCACATCAAGGAGGCGCACGAGGGCGCCGTGGTTAAGGTTGAGTT
CCTGCAGAGCCGTGCTCCTGCCACCCCCTTGCCTCGTCCCAGCCCGCTGG
CTGCCGCGACGGCCGGCCAAGGCCAACCGTGGCTGCTCACCTCCGTGGGT
ATGGATGGTATTGTCAGACGCTGGGATGCTCGTGGAGGAACTGCGGCTGC
TGCCCAGGGTTTGTTGAAAGAGTGGAAGGGCCACTTGGGTCTTGTTGAGA
ACTCGGAGGGTGAACAATCTGGCGGTATCATGGGCTTTGTCCAGAGCTCG
GATGGTAAGCGGGTTGTTACGGCCGGTGATGACGGTATTACTCTGGTATT
TGAGCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_64170ATCC64974_64170Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64170-T1.exon1ATCC64974_64170-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64170-T1.cdsATCC64974_64170-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64170-T1ATCC64974_64170-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:317277..318836 +
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