You are here

Home

ATCC64974_64340-T1, ATCC64974_64340-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_64340-T1
Unique NameATCC64974_64340-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:368737..370319+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_64340-T1 ID=ATCC64974_64340-T1|Name=ATCC64974_64340-T1|organism=Aspergillus niger N402|type=mRNA|length=1583bp|location=Sequence derived from alignment at OGUI01000010.1:368737..370319+ (Aspergillus niger N402)
ATGGTTGGTGCCCAGCGTTGGCCCTTGTTGACAGCTCTTGTCGGCTCCTG
ATGTCACTTATCTGACCAATCTTTGCAACAGGGTAACCAGCAGTCCAACA
TCGGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGAAAGACAAGAAGGTA
AGCTATACTCCCGTGTTCATCCTGTCAGTTGGCGGTCGGCTTACAATACG
CTCCTCTGCAGAAGGACAAGCCCAGATACGAACCACCTCCGCCGCCTACG
ACTCGTCTCGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTC
CAAGCTTCCGGACATCTTCCCAACGTCACGATGTAAATTACGATATCTCC
GAATGCAACGAGTCCACGACCATTTGTTGCTAGAGGAAGAGTACGTGGAG
AACATGGAGCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGC
GAACCGTAATGATCTCGACATCATGGATCGGAACGCCGATGAGAGAAGCC
GGGTTGACGACATGAGAGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAG
CTGATTGACGATGACCACGCCATCGTCTCGAGCGCGACTGGACCAGAATA
CTATGTTTCGATCATGTCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTG
CTAGCATTCTTCTACACCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACC
GAAGAATCCGACCCCCTCGTATCAGTGATGAAGCTCGACAAAGCTCCCAC
AGAATCATATGCCGATATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCC
GAGAGTCCGTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACGAGGAGATG
GGTATCAAGCCACCCAAGGGTGTGATTCTCTACGGTGCCCCTGGTACCGG
AAAGACGCTGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGCTACTTTCC
TCCGTATCGTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAGATGGCCCT
CGTCTGGTCCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCAT
TGTTTTCATTGATGAAATCGATGCGATTGGTACGAAGCGTTATGATTCTA
CGTCAGGTGGTGAACGAGAAATCCAGCGTACTATGCTTGAGCTTCTTAAC
CAGCTCGATGGTTTCGATGATCGGGGTGACGTCAAGGTCATCATGGCCAC
CAACAAGATTGAGACCTTGGATCCTGCTTTGATTCGTCCGGGACGTATCG
ACCGAAAGATTCTCTTCGAAAACCCAGACCGTAAGTCACTGAGTCCATAC
ATTTGTGCCAGATTGCTAACTATGCACAGAAAATACCAAGAAGAAGATCT
TTACCCTGCACACTTCCAAGATGTCGCTGGGAGACGATGTCGACCTGGAC
GAGTTCATCAACCAGAAGGATGATCTCTCTGGTGCTGATATTCGTGCGAT
CTGTACTGAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTGC
AGATGGACGACTTCCGCGCAGCAAGGGAGCGGATCATGAAGACGAAGCAG
GATGGAGGCCCGGTGGAGGGACTGTACTTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:368737..370319+

>ATCC64974_64340-T1 ID=ATCC64974_64340-T1|Name=ATCC64974_64340-T1|organism=Aspergillus niger N402|type=CDS|length=5568bp|location=Sequence derived from alignment at OGUI01000010.1:368737..370319+ (Aspergillus niger N402)
ATGGGTAACCAGCAGTCCAACATCGGCGGAGGCCCCGGTGGCGATGGAAG
GGATGAGAAAGACAAGAAGAAGGACAAGCCCAGATACGAACCACCTCCGC
CGCCTACGACTCGTCTCGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGT
ACTGCCTCCAAGCTTCCGGACATCTTCCCAACGTCACGATGTAAATTACG
ATATCTCCGAATGCAACGAGTCCACGACCATTTGTTGCTAGAGGAAGAGT
ACGTGGAGAACATGGAGCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTG
GACTCGGCGAACCGTAATGATCTCGACATCATGGATCGGAACGCCGATGA
GAGAAGCCGGGTTGACGACATGAGAGGCAGCCCCATGGGTGTCGGAAATC
TGGAAGAGCTGATTGACGATGACCACGCCATCGTCTCGAGCGCGACTGGA
CCAGAATACTATGTTTCGATCATGTCGTTCGTCGACAAAGACCTGCTCGA
GCCTGGTGCTAGCATTCTTCTACACCACAAGTCGGTCTCGGTTGTCGGTG
TGCTCACCGAAGAATCCGACCCCCTCGTATCAGTGATGAAGCTCGACAAA
GCTCCCACAGAATCATATGCCGATATTGGTGGTCTGGAAACCCAGATCCA
GGAAGTCCGAGAGTCCGTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACG
AGGAGATGGGTATCAAGCCACCCAAGGGTGTGATTCTCTACGGTGCCCCT
GGTACCGGAAAGACGCTGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGC
TACTTTCCTCCGTATCGTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAG
ATGGCCCTCGTCTGGTCCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCC
CCCTCCATTGTTTTCATTGATGAAATCGATGCGATTGGTACGAAGCGTTA
TGATTCTACGTCAGGTGGTGAACGAGAAATCCAGCGTACTATGCTTGAGC
TTCTTAACCAGCTCGATGGTTTCGATGATCGGGGTGACGTCAAGGTCATC
ATGGCCACCAACAAGATTGAGACCTTGGATCCTGCTTTGATTCGTCCGGG
ACGTATCGACCGAAAGATTCTCTTCGAAAACCCAGACCAAAATACCAAGA
AGAAGATCTTTACCCTGCACACTTCCAAGATGTCGCTGGGAGACGATGTC
GACCTGGACGAGTTCATCAACCAGAAGGATGATCTCTCTGGTGCTGATAT
TCGTGCGATCTGTACTGAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGA
TGCGGGTGCAGATGGACGACTTCCGCGCAGCAAGGGAGCGGATCATGAAG
ACGAAGCAGGATGGAGGCCCGGTGGAGGGACTGTACTTGTAGATGGGTAA
CCAGCAGTCCAACATCGGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGA
AAGACAAGAAGAAGGACAAGCCCAGATACGAACCACCTCCGCCGCCTACG
ACTCGTCTCGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTC
CAAGCTTCCGGACATCTTCCCAACGTCACGATGTAAATTACGATATCTCC
GAATGCAACGAGTCCACGACCATTTGTTGCTAGAGGAAGAGTACGTGGAG
AACATGGAGCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGC
GAACCGTAATGATCTCGACATCATGGATCGGAACGCCGATGAGAGAAGCC
GGGTTGACGACATGAGAGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAG
CTGATTGACGATGACCACGCCATCGTCTCGAGCGCGACTGGACCAGAATA
CTATGTTTCGATCATGTCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTG
CTAGCATTCTTCTACACCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACC
GAAGAATCCGACCCCCTCGTATCAGTGATGAAGCTCGACAAAGCTCCCAC
AGAATCATATGCCGATATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCC
GAGAGTCCGTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACGAGGAGATG
GGTATCAAGCCACCCAAGGGTGTGATTCTCTACGGTGCCCCTGGTACCGG
AAAGACGCTGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGCTACTTTCC
TCCGTATCGTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAGATGGCCCT
CGTCTGGTCCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCAT
TGTTTTCATTGATGAAATCGATGCGATTGGTACGAAGCGTTATGATTCTA
CGTCAGGTGGTGAACGAGAAATCCAGCGTACTATGCTTGAGCTTCTTAAC
CAGCTCGATGGTTTCGATGATCGGGGTGACGTCAAGGTCATCATGGCCAC
CAACAAGATTGAGACCTTGGATCCTGCTTTGATTCGTCCGGGACGTATCG
ACCGAAAGATTCTCTTCGAAAACCCAGACCAAAATACCAAGAAGAAGATC
TTTACCCTGCACACTTCCAAGATGTCGCTGGGAGACGATGTCGACCTGGA
CGAGTTCATCAACCAGAAGGATGATCTCTCTGGTGCTGATATTCGTGCGA
TCTGTACTGAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTG
CAGATGGACGACTTCCGCGCAGCAAGGGAGCGGATCATGAAGACGAAGCA
GGATGGAGGCCCGGTGGAGGGACTGTACTTGTAGATGGGTAACCAGCAGT
CCAACATCGGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGAAAGACAAG
AAGAAGGACAAGCCCAGATACGAACCACCTCCGCCGCCTACGACTCGTCT
CGGACGTAAGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTCCAAGCTTC
CGGACATCTTCCCAACGTCACGATGTAAATTACGATATCTCCGAATGCAA
CGAGTCCACGACCATTTGTTGCTAGAGGAAGAGTACGTGGAGAACATGGA
GCGCCTGCGCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGCGAACCGTA
ATGATCTCGACATCATGGATCGGAACGCCGATGAGAGAAGCCGGGTTGAC
GACATGAGAGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAGCTGATTGA
CGATGACCACGCCATCGTCTCGAGCGCGACTGGACCAGAATACTATGTTT
CGATCATGTCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTGCTAGCATT
CTTCTACACCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACCGAAGAATC
CGACCCCCTCGTATCAGTGATGAAGCTCGACAAAGCTCCCACAGAATCAT
ATGCCGATATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCCGAGAGTCC
GTGGAGCTTCCCCTGCTGCATCCGGAGCTGTACGAGGAGATGGGTATCAA
GCCACCCAAGGGTGTGATTCTCTACGGTGCCCCTGGTACCGGAAAGACGC
TGCTGGCCAAGGCGGTCGCGAACCAAACCAGTGCTACTTTCCTCCGTATC
GTGGGTAGTGAGCTGATTCAGAAGTACCTTGGAGATGGCCCTCGTCTGGT
CCGTCAAATCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCATTGTTTTCA
TTGATGAAATCGATGCGATTGGTACGAAGCGTTATGATTCTACGTCAGGT
GGTGAACGAGAAATCCAGCGTACTATGCTTGAGCTTCTTAACCAGCTCGA
TGGTTTCGATGATCGGGGTGACGTCAAGGTCATCATGGCCACCAACAAGA
TTGAGACCTTGGATCCTGCTTTGATTCGTCCGGGACGTATCGACCGAAAG
ATTCTCTTCGAAAACCCAGACCAAAATACCAAGAAGAAGATCTTTACCCT
GCACACTTCCAAGATGTCGCTGGGAGACGATGTCGACCTGGACGAGTTCA
TCAACCAGAAGGATGATCTCTCTGGTGCTGATATTCGTGCGATCTGTACT
GAAGCCGGTTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTGCAGATGGA
CGACTTCCGCGCAGCAAGGGAGCGGATCATGAAGACGAAGCAGGATGGAG
GCCCGGTGGAGGGACTGTACTTGTAGATGGGTAACCAGCAGTCCAACATC
GGCGGAGGCCCCGGTGGCGATGGAAGGGATGAGAAAGACAAGAAGAAGGA
CAAGCCCAGATACGAACCACCTCCGCCGCCTACGACTCGTCTCGGACGTA
AGAAGCGCAAGGCTGCCGGCCCGAGTACTGCCTCCAAGCTTCCGGACATC
TTCCCAACGTCACGATGTAAATTACGATATCTCCGAATGCAACGAGTCCA
CGACCATTTGTTGCTAGAGGAAGAGTACGTGGAGAACATGGAGCGCCTGC
GCAAGACCAAGGCCCAGGCTGCGCTGGACTCGGCGAACCGTAATGATCTC
GACATCATGGATCGGAACGCCGATGAGAGAAGCCGGGTTGACGACATGAG
AGGCAGCCCCATGGGTGTCGGAAATCTGGAAGAGCTGATTGACGATGACC
ACGCCATCGTCTCGAGCGCGACTGGACCAGAATACTATGTTTCGATCATG
TCGTTCGTCGACAAAGACCTGCTCGAGCCTGGTGCTAGCATTCTTCTACA
CCACAAGTCGGTCTCGGTTGTCGGTGTGCTCACCGAAGAATCCGACCCCC
TCGTATCAGTGATGAAGCTCGACAAAGCTCCCACAGAATCATATGCCGAT
ATTGGTGGTCTGGAAACCCAGATCCAGGAAGTCCGAGAGTCCGTGGAGCT
TCCCCTGCTGCATCCGGAGCTGTACGAGGAGATGGGTATCAAGCCACCCA
AGGGTGTGATTCTCTACGGTGCCCCTGGTACCGGAAAGACGCTGCTGGCC
AAGGCGGTCGCGAACCAAACCAGTGCTACTTTCCTCCGTATCGTGGGTAG
TGAGCTGATTCAGAAGTACCTTGGAGATGGCCCTCGTCTGGTCCGTCAAA
TCTTCCAGGTTGCAGCTGAGCACGCCCCCTCCATTGTTTTCATTGATGAA
ATCGATGCGATTGGTACGAAGCGTTATGATTCTACGTCAGGTGGTGAACG
AGAAATCCAGCGTACTATGCTTGAGCTTCTTAACCAGCTCGATGGTTTCG
ATGATCGGGGTGACGTCAAGGTCATCATGGCCACCAACAAGATTGAGACC
TTGGATCCTGCTTTGATTCGTCCGGGACGTATCGACCGAAAGATTCTCTT
CGAAAACCCAGACCAAAATACCAAGAAGAAGATCTTTACCCTGCACACTT
CCAAGATGTCGCTGGGAGACGATGTCGACCTGGACGAGTTCATCAACCAG
AAGGATGATCTCTCTGGTGCTGATATTCGTGCGATCTGTACTGAAGCCGG
TTTGATGGCGCTGAGAGAGCGCCGGATGCGGGTGCAGATGGACGACTTCC
GCGCAGCAAGGGAGCGGATCATGAAGACGAAGCAGGATGGAGGCCCGGTG
GAGGGACTGTACTTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MTS2ATCC64974_64340Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64340-T1.exon1ATCC64974_64340-T1.exon1Aspergillus niger N402exon
ATCC64974_64340-T1.exon2ATCC64974_64340-T1.exon2Aspergillus niger N402exon
ATCC64974_64340-T1.exon3ATCC64974_64340-T1.exon3Aspergillus niger N402exon
ATCC64974_64340-T1.exon4ATCC64974_64340-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64340-T1.cdsATCC64974_64340-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64340-T1ATCC64974_64340-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S protease regulatory subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:368737..370319 +
Powered by Drupal