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ATCC64974_64860-T1, ATCC64974_64860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_64860-T1
Unique NameATCC64974_64860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:521120..522346+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_64860-T1 ID=ATCC64974_64860-T1|Name=ATCC64974_64860-T1|organism=Aspergillus niger N402|type=mRNA|length=1227bp|location=Sequence derived from alignment at OGUI01000010.1:521120..522346+ (Aspergillus niger N402)
ATGGCTGAAGCAACACCCCCAACTGAAACAGTAACCCCTCCTACGGAGGA
GGTCGTCGAAGACCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGCCCAGCACGCCCACA
AGTCGACCCAGCGACAATCAAATCCGAGCCCCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTAAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGATAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAATACCTGCACCGT
TTACCAACACTGCACGACATATTCAACCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGACTATCGGGATGATATGGGTGGTGTAGGATCATTCA
TGAGACAGAATCGCACGTTGTATGTGGGACGGATTCATGTGACGGACTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCCCGGGGTGTTGCGTTCGTGACGTATACAAATG
AGGCGAATGCGCAGTTTGCGAAGGAGGCGATGGCGCATCAGAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TTAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAAGGCAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAGACTGCTGCTGCTGCTCCGCAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTGGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:521120..522346+

>ATCC64974_64860-T1 ID=ATCC64974_64860-T1|Name=ATCC64974_64860-T1|organism=Aspergillus niger N402|type=CDS|length=1227bp|location=Sequence derived from alignment at OGUI01000010.1:521120..522346+ (Aspergillus niger N402)
ATGGCTGAAGCAACACCCCCAACTGAAACAGTAACCCCTCCTACGGAGGA
GGTCGTCGAAGACCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGCCCAGCACGCCCACA
AGTCGACCCAGCGACAATCAAATCCGAGCCCCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTAAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGATAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAATACCTGCACCGT
TTACCAACACTGCACGACATATTCAACCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGACTATCGGGATGATATGGGTGGTGTAGGATCATTCA
TGAGACAGAATCGCACGTTGTATGTGGGACGGATTCATGTGACGGACTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCCCGGGGTGTTGCGTTCGTGACGTATACAAATG
AGGCGAATGCGCAGTTTGCGAAGGAGGCGATGGCGCATCAGAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TTAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAAGGCAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAGACTGCTGCTGCTGCTCCGCAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTGGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC2ATCC64974_64860Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64860-T1.exon1ATCC64974_64860-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64860-T1.cdsATCC64974_64860-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64860-T1ATCC64974_64860-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034181
DBxrefInterPro:IPR000571
DBxrefInterPro:IPR032297
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00642
DBxrefPFAM:PF16131
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:521120..522346 +
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