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ATCC64974_65560-T1, ATCC64974_65560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_65560-T1
Unique NameATCC64974_65560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:764101..765134+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_65560-T1 ID=ATCC64974_65560-T1|Name=ATCC64974_65560-T1|organism=Aspergillus niger N402|type=mRNA|length=1034bp|location=Sequence derived from alignment at OGUI01000010.1:764101..765134+ (Aspergillus niger N402)
ATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGAGTGAGACGCACCCCG
GAGAATTTTCTGCTGGCCTGCTTGACCATGCGGCCCAGACCTCGCAGCTT
CTGGAATCTTAACTAACGTATTTCTTGTTTTCCAGAGTCGGTGTTTTCTC
CCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACT
TCTACAGGTGCTTATATACCCGTTTCTGCCAGAACCACAAACCAGTCCCA
TTAACGCTCCTTCCAGTGTATTCGAGGCCGAATTGCAAGATGTCATTCCC
ATCTGCCACGCAACCATTGCCGGAACCCGCATCGTTGGCCGTCTGACGGC
AGGGTATGTCTAGATCCGATATCCATTTGGATCTCTGTATCAACCCCGCT
GACCATCTTGCCCCCAATATCAGAAACCGTAATGGTCTCCTCGTCCCCAC
CACCACGACAGACCAAGAGCTTCAACATCTCCGGAATACGCTACCCGAAT
CGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTGGGGAACGTC
ATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCTCGAGCGGGA
AACCGAAGAGATGTATGTCGTGCTGCCAATATCTGCAAGTACTGCGCTCA
ATGCTAACATGCTAAACCAACAGCATCGCCGATGTCCTCGGTGTCGAAGT
CTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGGCCC
TCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGACCAG
GATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAA
CCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCG
CTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAAAGT
GTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGC
CAACAAGGAGAGTATTGTGGAGAGTTTCTACTAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:764101..765134+

>ATCC64974_65560-T1 ID=ATCC64974_65560-T1|Name=ATCC64974_65560-T1|organism=Aspergillus niger N402|type=CDS|length=3720bp|location=Sequence derived from alignment at OGUI01000010.1:764101..765134+ (Aspergillus niger N402)
ATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGAAGTCGGTGTTTTCTC
CCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACT
TCTACAGTGTATTCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCAC
GCAACCATTGCCGGAACCCGCATCGTTGGCCGTCTGACGGCAGGAAACCG
TAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATC
TCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGT
CTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGAT
CCACCCGGATCTCGAGCGGGAAACCGAAGAGATCATCGCCGATGTCCTCG
GTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCC
TACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCAT
CCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTG
GTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAAC
GACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGT
CATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAA
TGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGATGGCG
GTCCGCGCGCAGTTCGAGAACTCCAACGAAGTCGGTGTTTTCTCCCGTCT
CACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACA
GTGTATTCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACC
ATTGCCGGAACCCGCATCGTTGGCCGTCTGACGGCAGGAAACCGTAATGG
TCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGA
ATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCG
GCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCC
GGATCTCGAGCGGGAAACCGAAGAGATCATCGCCGATGTCCTCGGTGTCG
AAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATG
GCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGA
CCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTG
TCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGG
CTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGA
AAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCG
ACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGATGGCGGTCCGC
GCGCAGTTCGAGAACTCCAACGAAGTCGGTGTTTTCTCCCGTCTCACCAA
CTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGTGTAT
TCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCC
GGAACCCGCATCGTTGGCCGTCTGACGGCAGGAAACCGTAATGGTCTCCT
CGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAATACGC
TACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTG
GGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCT
CGAGCGGGAAACCGAAGAGATCATCGCCGATGTCCTCGGTGTCGAAGTCT
TCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGGCCCTC
TCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGACCAGGA
TGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAACC
GCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCGCT
GTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAAAGTGT
CTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGCCA
ACAAGGAGAGTATTGTGGAGAGTTTCTACTAGATGGCGGTCCGCGCGCAG
TTCGAGAACTCCAACGAAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTA
CGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGTGTATTCGAGG
CCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACC
CGCATCGTTGGCCGTCTGACGGCAGGAAACCGTAATGGTCTCCTCGTCCC
CACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAATACGCTACCCG
AATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTGGGGAAC
GTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCTCGAGCG
GGAAACCGAAGAGATCATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTC
AAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGGCCCTCTCCAAC
CAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGACCAGGATGAACT
TTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTA
GCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCGCTGTCACG
GGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCG
TCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGG
AGAGTATTGTGGAGAGTTTCTACTAGATGGCGGTCCGCGCGCAGTTCGAG
AACTCCAACGAAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTACGCTAT
TGTTGCCATTGGCGCCTCCGAGAACTTCTACAGTGTATTCGAGGCCGAAT
TGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATC
GTTGGCCGTCTGACGGCAGGAAACCGTAATGGTCTCCTCGTCCCCACCAC
CACGACAGACCAAGAGCTTCAACATCTCCGGAATACGCTACCCGAATCGG
TAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTGGGGAACGTCATC
TGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCTCGAGCGGGAAAC
CGAAGAGATCATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCG
TCGCCGATAACGTCCTGACTGGCTCCTACATGGCCCTCTCCAACCAAGGT
GGTATCGTCCACCCCAAGACCTCCATCCGTGACCAGGATGAACTTTCCTC
CCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCG
TCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTG
GACACGACAGCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGG
TGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTA
TTGTGGAGAGTTTCTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF6ATCC64974_65560Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65560-T1ATCC64974_65560-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65560-T1.exon1ATCC64974_65560-T1.exon1Aspergillus niger N402exon
ATCC64974_65560-T1.exon2ATCC64974_65560-T1.exon2Aspergillus niger N402exon
ATCC64974_65560-T1.exon3ATCC64974_65560-T1.exon3Aspergillus niger N402exon
ATCC64974_65560-T1.exon4ATCC64974_65560-T1.exon4Aspergillus niger N402exon
ATCC64974_65560-T1.exon5ATCC64974_65560-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65560-T1.cdsATCC64974_65560-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG092644O2
DBxrefInterPro:IPR002769
DBxrefPFAM:PF01912
ProductEukaryotic translation initiation factor 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:764101..765134 +
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