You are here

Home

ATCC64974_6580-T1, ATCC64974_6580-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_6580-T1
Unique NameATCC64974_6580-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1991445..1992036-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_6580-T1 ID=ATCC64974_6580-T1|Name=ATCC64974_6580-T1|organism=Aspergillus niger N402|type=mRNA|length=592bp|location=Sequence derived from alignment at OGUI01000001.1:1991445..1992036- (Aspergillus niger N402)
ATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCA
AGCAAGCCCTATCGCCAAGCGCGATGCTGCGACAGTGCTTTCCGACCTTG
AGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCAACTGG
ACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGT
CAAAAGTGCTTTGGACACGGCCATAACTGATACGGAGGCCGCTTCCGCAT
TCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCC
ACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAGGTAAATTCAAG
AAAGCCGACGAGCTTCATTGTTCTGTTGTTGCAGGACTGATGCACAGTTC
TAGGAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTC
CCTGGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGG
CGAAGGCCACCACGACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCC
ATCGACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1991445..1992036-

>ATCC64974_6580-T1 ID=ATCC64974_6580-T1|Name=ATCC64974_6580-T1|organism=Aspergillus niger N402|type=CDS|length=1056bp|location=Sequence derived from alignment at OGUI01000001.1:1991445..1992036- (Aspergillus niger N402)
GAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTCCCT
GGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGGCGA
AGGCCACCACGACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCCATC
GACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAGTAAATGATTTGCAA
CACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCAAGCAAGCCCTA
TCGCCAAGCGCGATGCTGCGACAGTGCTTTCCGACCTTGAGACTATTGGA
AATGACGTTACTACTCTCAAGACGGACGTTACCAACTGGACCGGAGACCT
TCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGTCAAAAGTGCTT
TGGACACGGCCATAACTGATACGGAGGCCGCTTCCGCATTCACCGATACG
GAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCCACGATCATTAT
AGCAACCCTAGATGAGCTTATCTCCAAGGAGTCTACTGCGGCATCTGCGG
GCGTCACTTCCACTTTGCTCTCCTCCCTGGAGACACTCAAGACCGACACG
GACGAGCTGGGGGCGGACCTGGAGGCGAAGGCCACCACGACGGATGCGGC
AACCATTGCCTCGACTCTTGCCTCCATCGACGCGGCATTTTCGAGTGCAA
TTGCTGCCTATGAGTAAATGATTTGCAACACTTTGCTCGTCGTTGCATTG
AGTCTGGGTCTCGTCCAAGCAAGCCCTATCGCCAAGCGCGATGCTGCGAC
AGTGCTTTCCGACCTTGAGACTATTGGAAATGACGTTACTACTCTCAAGA
CGGACGTTACCAACTGGACCGGAGACCTTCTCGCAGCTCTAGGCATTTTG
TCCGATTACAACACCGTCAAAAGTGCTTTGGACACGGCCATAACTGATAC
GGAGGCCGCTTCCGCATTCACCGATACGGAGAGTTCCAGCATCACAACTG
AAGTAACTTCTCTAGCCACGATCATTATAGCAACCCTAGATGAGCTTATC
TCCAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_6580ATCC64974_6580Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6580-T1ATCC64974_6580-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6580-T1.cdsATCC64974_6580-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6580-T1.exon2ATCC64974_6580-T1.exon2Aspergillus niger N402exon
ATCC64974_6580-T1.exon1ATCC64974_6580-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR021054
DBxrefPFAM:PF12296
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1991445..1992036 -
Powered by Drupal