You are here

Home

ATCC64974_65800-T1, ATCC64974_65800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_65800-T1
Unique NameATCC64974_65800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:854789..856455+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_65800-T1 ID=ATCC64974_65800-T1|Name=ATCC64974_65800-T1|organism=Aspergillus niger N402|type=mRNA|length=1667bp|location=Sequence derived from alignment at OGUI01000010.1:854789..856455+ (Aspergillus niger N402)
ATGGCGAATGCGTGAGTATCTCCCTTTTATTGAAACACACCTGGCCACGT
CTCCCGAGAATCCAAGTTCAGCGGTTGACGCTTTTCTAAACCATCCACAG
CATCGGCTCAGCATGGCGGTCCTTTTGGCATACGATGACTTCTTATGATC
GCCATGCTTCCCATGACTCGCCGTATCGAACCGGTAAACATGTGCCTCTT
AGTCAAAGTCGACATGAGCCTCTCACATCCATTGCAACAAGCGCTATCGA
ATCTCGACCGGATCTGACTTCCCCGTATGATGACGATCAGCCGAAAGGCT
CAAATGGCTGGTCCGGCTCCCCTACGGGAGGGGGCTCGCCCAATCGCCCA
TACTCTCCTGGAATGCGATCACTGTCATCTCAGAAGCGTCAATCCGCAGA
TCCCAATGCGGATGGTGCTCCGGAGATCCAGATGCAAAGTTTCCATGATG
GTGCACCGCCCCCTCCACCCATCGCTCATTCATGGAGGAAGATTGAGAAA
TGGCTGGAAAATAATTACCAGGAGCTTTGGGATAATCTATGTGAGGGCTG
CACCCAAAATGACATTAACGAACTGGAGCACGAACTGGACTGCAGCCTAC
CGTTGGAACTGCGGGAATCTTTGATGGTCCATGATGGTCAGGAGCGGGGA
GGGTTGCCCACCGGTGTCATCTTTGGCTGCATGCTTCTGGACTGTGAGGA
GATCGTTCAAGAATGGAAGAACTGGAGGGTAGTCAACGAGGAGTTTTTGA
GCTCGTCTATGATGAACGCTCCTTCAAGGCCAACTCCCAGTTCATCGTCC
GCCGTGCCCCCTGCCCCGGGTGCTAATGGTGCGTGGAGAAATGATCTGCT
CGAGCGACAGGACTCGCAGCCCCCCGGTGCAGTCCAGAAGGCCTATGCTC
ATCCGGCTTGGATTCCCCTGGCTCGCGACTGGGGCGGCAACCATATCGCT
ATCGACTTGGCCCCAGGACCTGCTGGAAAGTGGGGACAGGTTATCATCTT
TGGCCGGGACTACGATTGTAAATACGTTGTTGCTCGGTCCTGGTCTGCCT
TCCTTGCTACACTAGCAGATGATATTTGCAGTGGCAAAGTTTCTGTGGAT
GAAGAGACGAATGAGATGAAGCTTTTGGAGTTCAAGTCGCAAAACGTGGA
ACCCCCCTACTTGGAGATCTTGAGGTGGAGGGCCGATCAGAAGTACGGCA
GGAGACAACCTAGGCGCAAGGCTCCGAATGGCCTGGGATTGAGTACGGGT
GGCAAGTCGGGCAAAGAGTCACCCTATGGCAGCCCAACGCCCAGTGAAGA
GCGTGGAAGGTCGCCGCATCGCTTCCCCAACCGGGGGTCTACTCAAAGTC
CTAAGACTCAATTCGGCATGTCAAGTCCGCTGGCTCGCGTCACAGAAGAG
GCACCGAGCCCGGTACACACTGTTGAGGAGACTGGGCTTCCAGAAAAGGC
CGCTAAGGAGAACGAGGAAGAGCGTTCATCCGAAGACTTGATGGAGGTAG
CCACGCCTCAAATCGGCGGAAAAGAGAACGAGGGAGCCGGAAAGAGTGAG
GAGGAGCGCCAGTCATTGGAAGCGGACAAGGCGCAAAAGCGTGATTCGAA
TCAATTGTCTTCGGCCACTGGCTTGGACGCCGAGGTCTTGGGTGAAATGA
AAAATGTTGCGATCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:854789..856455+

>ATCC64974_65800-T1 ID=ATCC64974_65800-T1|Name=ATCC64974_65800-T1|organism=Aspergillus niger N402|type=CDS|length=3156bp|location=Sequence derived from alignment at OGUI01000010.1:854789..856455+ (Aspergillus niger N402)
ATGGCGAATGCCATCGGCTCAGCATGGCGGTCCTTTTGGCATACGATGAC
TTCTTATGATCGCCATGCTTCCCATGACTCGCCGTATCGAACCGGTAAAC
ATGTGCCTCTTAGTCAAAGTCGACATGAGCCTCTCACATCCATTGCAACA
AGCGCTATCGAATCTCGACCGGATCTGACTTCCCCGTATGATGACGATCA
GCCGAAAGGCTCAAATGGCTGGTCCGGCTCCCCTACGGGAGGGGGCTCGC
CCAATCGCCCATACTCTCCTGGAATGCGATCACTGTCATCTCAGAAGCGT
CAATCCGCAGATCCCAATGCGGATGGTGCTCCGGAGATCCAGATGCAAAG
TTTCCATGATGGTGCACCGCCCCCTCCACCCATCGCTCATTCATGGAGGA
AGATTGAGAAATGGCTGGAAAATAATTACCAGGAGCTTTGGGATAATCTA
TGTGAGGGCTGCACCCAAAATGACATTAACGAACTGGAGCACGAACTGGA
CTGCAGCCTACCGTTGGAACTGCGGGAATCTTTGATGGTCCATGATGGTC
AGGAGCGGGGAGGGTTGCCCACCGGTGTCATCTTTGGCTGCATGCTTCTG
GACTGTGAGGAGATCGTTCAAGAATGGAAGAACTGGAGGGTAGTCAACGA
GGAGTTTTTGAGCTCGTCTATGATGAACGCTCCTTCAAGGCCAACTCCCA
GTTCATCGTCCGCCGTGCCCCCTGCCCCGGGTGCTAATGGTGCGTGGAGA
AATGATCTGCTCGAGCGACAGGACTCGCAGCCCCCCGGTGCAGTCCAGAA
GGCCTATGCTCATCCGGCTTGGATTCCCCTGGCTCGCGACTGGGGCGGCA
ACCATATCGCTATCGACTTGGCCCCAGGACCTGCTGGAAAGTGGGGACAG
GTTATCATCTTTGGCCGGGACTACGATTGTAAATACGTTGTTGCTCGGTC
CTGGTCTGCCTTCCTTGCTACACTAGCAGATGATATTTGCAGTGGCAAAG
TTTCTGTGGATGAAGAGACGAATGAGATGAAGCTTTTGGAGTTCAAGTCG
CAAAACGTGGAACCCCCCTACTTGGAGATCTTGAGGTGGAGGGCCGATCA
GAAGTACGGCAGGAGACAACCTAGGCGCAAGGCTCCGAATGGCCTGGGAT
TGAGTACGGGTGGCAAGTCGGGCAAAGAGTCACCCTATGGCAGCCCAACG
CCCAGTGAAGAGCGTGGAAGGTCGCCGCATCGCTTCCCCAACCGGGGGTC
TACTCAAAGTCCTAAGACTCAATTCGGCATGTCAAGTCCGCTGGCTCGCG
TCACAGAAGAGGCACCGAGCCCGGTACACACTGTTGAGGAGACTGGGCTT
CCAGAAAAGGCCGCTAAGGAGAACGAGGAAGAGCGTTCATCCGAAGACTT
GATGGAGGTAGCCACGCCTCAAATCGGCGGAAAAGAGAACGAGGGAGCCG
GAAAGAGTGAGGAGGAGCGCCAGTCATTGGAAGCGGACAAGGCGCAAAAG
CGTGATTCGAATCAATTGTCTTCGGCCACTGGCTTGGACGCCGAGGTCTT
GGGTGAAATGAAAAATGTTGCGATCTAGATGGCGAATGCCATCGGCTCAG
CATGGCGGTCCTTTTGGCATACGATGACTTCTTATGATCGCCATGCTTCC
CATGACTCGCCGTATCGAACCGGTAAACATGTGCCTCTTAGTCAAAGTCG
ACATGAGCCTCTCACATCCATTGCAACAAGCGCTATCGAATCTCGACCGG
ATCTGACTTCCCCGTATGATGACGATCAGCCGAAAGGCTCAAATGGCTGG
TCCGGCTCCCCTACGGGAGGGGGCTCGCCCAATCGCCCATACTCTCCTGG
AATGCGATCACTGTCATCTCAGAAGCGTCAATCCGCAGATCCCAATGCGG
ATGGTGCTCCGGAGATCCAGATGCAAAGTTTCCATGATGGTGCACCGCCC
CCTCCACCCATCGCTCATTCATGGAGGAAGATTGAGAAATGGCTGGAAAA
TAATTACCAGGAGCTTTGGGATAATCTATGTGAGGGCTGCACCCAAAATG
ACATTAACGAACTGGAGCACGAACTGGACTGCAGCCTACCGTTGGAACTG
CGGGAATCTTTGATGGTCCATGATGGTCAGGAGCGGGGAGGGTTGCCCAC
CGGTGTCATCTTTGGCTGCATGCTTCTGGACTGTGAGGAGATCGTTCAAG
AATGGAAGAACTGGAGGGTAGTCAACGAGGAGTTTTTGAGCTCGTCTATG
ATGAACGCTCCTTCAAGGCCAACTCCCAGTTCATCGTCCGCCGTGCCCCC
TGCCCCGGGTGCTAATGGTGCGTGGAGAAATGATCTGCTCGAGCGACAGG
ACTCGCAGCCCCCCGGTGCAGTCCAGAAGGCCTATGCTCATCCGGCTTGG
ATTCCCCTGGCTCGCGACTGGGGCGGCAACCATATCGCTATCGACTTGGC
CCCAGGACCTGCTGGAAAGTGGGGACAGGTTATCATCTTTGGCCGGGACT
ACGATTGTAAATACGTTGTTGCTCGGTCCTGGTCTGCCTTCCTTGCTACA
CTAGCAGATGATATTTGCAGTGGCAAAGTTTCTGTGGATGAAGAGACGAA
TGAGATGAAGCTTTTGGAGTTCAAGTCGCAAAACGTGGAACCCCCCTACT
TGGAGATCTTGAGGTGGAGGGCCGATCAGAAGTACGGCAGGAGACAACCT
AGGCGCAAGGCTCCGAATGGCCTGGGATTGAGTACGGGTGGCAAGTCGGG
CAAAGAGTCACCCTATGGCAGCCCAACGCCCAGTGAAGAGCGTGGAAGGT
CGCCGCATCGCTTCCCCAACCGGGGGTCTACTCAAAGTCCTAAGACTCAA
TTCGGCATGTCAAGTCCGCTGGCTCGCGTCACAGAAGAGGCACCGAGCCC
GGTACACACTGTTGAGGAGACTGGGCTTCCAGAAAAGGCCGCTAAGGAGA
ACGAGGAAGAGCGTTCATCCGAAGACTTGATGGAGGTAGCCACGCCTCAA
ATCGGCGGAAAAGAGAACGAGGGAGCCGGAAAGAGTGAGGAGGAGCGCCA
GTCATTGGAAGCGGACAAGGCGCAAAAGCGTGATTCGAATCAATTGTCTT
CGGCCACTGGCTTGGACGCCGAGGTCTTGGGTGAAATGAAAAATGTTGCG
ATCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042546cell wall biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_65800ATCC64974_65800Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65800-T1.exon1ATCC64974_65800-T1.exon1Aspergillus niger N402exon
ATCC64974_65800-T1.exon2ATCC64974_65800-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65800-T1.cdsATCC64974_65800-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65800-T1ATCC64974_65800-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009203
DBxrefInterPro:IPR018958
DBxrefPFAM:PF09346
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:854789..856455 +
Powered by Drupal