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ATCC64974_66080-T1, ATCC64974_66080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_66080-T1
Unique NameATCC64974_66080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:926065..927147+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_66080-T1 ID=ATCC64974_66080-T1|Name=ATCC64974_66080-T1|organism=Aspergillus niger N402|type=mRNA|length=1083bp|location=Sequence derived from alignment at OGUI01000010.1:926065..927147+ (Aspergillus niger N402)
ATGGCCGTTGGAAAGTACGTGAATGCCCTACTCTATTATGATTTATGTTG
CAGCAATTCGATTGTAGTAGTCTCTTACTGATTTTATGGCAGGAACAAGC
GCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTC
ACCCGGAAAGACGAGTACTCTGTGAAGGTAAGTGTGCAACTTGAAGGTGT
GTGGATTTTGCTGACAGGAATAGGCTCCCTCGACCTTCCAGACCAGAGAG
TATGGCATCGCCCCTCCCCCCCAAATTTCGTCGTCGGGACTTTCAGATAT
TCTTTCGCCTCGTTATAATTATTTTTTGTCGCATTCCCCATGTGCAAACC
AGTCACTGACCAGTTCTTGTTGAAGTGTTGGAAAGACTCTGGTGAACCGT
ACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGA
AGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGG
TCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTC
CACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTG
GCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATC
TTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATC
AAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAA
GATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGC
TTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCT
ACCCAGGGAATTTACCCCCTGCAGAACGTTCGTCCCCCTCGACCCTCGTA
TTCTATCAAATGATTGCGATCCATCTAATACTCTATTAGGTCCACATTCG
CAAGGTCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTTA
ACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGA
GAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:926065..927147+

>ATCC64974_66080-T1 ID=ATCC64974_66080-T1|Name=ATCC64974_66080-T1|organism=Aspergillus niger N402|type=CDS|length=3855bp|location=Sequence derived from alignment at OGUI01000010.1:926065..927147+ (Aspergillus niger N402)
ATGGCCGTTGGAAAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAA
GAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGG
CTCCCTCGACCTTCCAGACCAGAGATGTTGGAAAGACTCTGGTGAACCGT
ACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGA
AGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGG
TCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTC
CACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTG
GCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATC
TTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATC
AAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAA
GATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGC
TTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCT
ACCCAGGGAATTTACCCCCTGCAGAACGTCCACATTCGCAAGGTCAAGCT
TCTTAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCG
AGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAA
CAGGTTCTTGAGAGCGTGTAAATGGCCGTTGGAAAGAACAAGCGCTTGTC
GAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGA
AAGACGAGTACTCTGTGAAGGCTCCCTCGACCTTCCAGACCAGAGATGTT
GGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTC
CCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACG
AGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGA
AAGAACTGCCTGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCT
GCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTG
TGAAGACGACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACG
AAGAGACGCCCCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCA
AATCCGCGCTATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCG
CTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATC
GGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGT
CCACATTCGCAAGGTCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGGTG
CCCTCCTTAACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAG
GTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAAATGGCCGT
TGGAAAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAA
CTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGGCTCCCTCG
ACCTTCCAGACCAGAGATGTTGGAAAGACTCTGGTGAACCGTACCAGTGG
TCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCC
TTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTC
CGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCT
GGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGC
TGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGT
CTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGAC
TACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCG
AGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACC
AAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGG
AATTTACCCCCTGCAGAACGTCCACATTCGCAAGGTCAAGCTTCTTAAGT
CCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTACA
ACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTTCT
TGAGAGCGTGTAAATGGCCGTTGGAAAGAACAAGCGCTTGTCGAAGGGCA
AGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAG
TACTCTGTGAAGGCTCCCTCGACCTTCCAGACCAGAGATGTTGGAAAGAC
TCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGG
GCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCAT
GCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTG
CCTGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCTGCGATCCC
TTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACG
ACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACG
CCCCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCG
CTATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGC
TCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGA
GATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGTCCACATTC
GCAAGGTCAAGCTTCTTAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTT
AACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAG
AGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAAATGGCCGTTGGAAAGA
ACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGAC
CCTTTCACCCGGAAAGACGAGTACTCTGTGAAGGCTCCCTCGACCTTCCA
GACCAGAGATGTTGGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGA
ACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGAC
TTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGA
CGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCTGGATTTCA
CGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAA
GCCAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGTCTGTTCGC
CATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGACTACATATG
CTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCGAGATCATG
CAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGAT
CCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTACC
CCCTGCAGAACGTCCACATTCGCAAGGTCAAGCTTCTTAAGTCCCCCAAG
TTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTACAACCGATGA
TAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAGCG
TGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS1ATCC64974_66080Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66080-T1ATCC64974_66080-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66080-T1.exon1ATCC64974_66080-T1.exon1Aspergillus niger N402exon
ATCC64974_66080-T1.exon2ATCC64974_66080-T1.exon2Aspergillus niger N402exon
ATCC64974_66080-T1.exon3ATCC64974_66080-T1.exon3Aspergillus niger N402exon
ATCC64974_66080-T1.exon4ATCC64974_66080-T1.exon4Aspergillus niger N402exon
ATCC64974_66080-T1.exon5ATCC64974_66080-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66080-T1.cdsATCC64974_66080-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR027500
DBxrefInterPro:IPR018281
DBxrefInterPro:IPR001593
DBxrefPFAM:PF01015
Productribosomal 40S subunit protein S1B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:926065..927147 +
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