You are here

ATCC64974_66220-T1, ATCC64974_66220-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_66220-T1
Unique NameATCC64974_66220-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1051184..1052140-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_66220-T1 ID=ATCC64974_66220-T1|Name=ATCC64974_66220-T1|organism=Aspergillus niger N402|type=mRNA|length=957bp|location=Sequence derived from alignment at OGUI01000010.1:1051184..1052140- (Aspergillus niger N402)
ATGGCCGGCTTCGTGGCTATGATCGCTGTATTTGTTGTAGTCCTCGTTGA GATGTTCTTTGCATTGAAAGGTGCAGGTCATGTCCATGGGAGCGAATACG ACCAGTTAATCAGCGACGTCGGTGCAGATTTCGCAAGTGACGATCAAGAC GAAGACACTGATTACGGAACCGGATTGGCCGACAATGTCCACCTTGACAG CCTTGGGGAAGACATGACTCTACGCTCTCCCGCGTCACTTGGAAGATCCC CAGCTAATGGGCCTTCAAGGCCAACTAATAAGGACTCGGCTGTGCCAACC GAACTCAACGACAGGGAGTTTGGAGAGTCACATACCTTTGAAGATACTCG CATTAATGCCCAGAAGAATCGGGATGAGCAGCCGTGGCATTCTGATCGCC GTCGGTCTCATGGTAGCGTACATCAAGGGACCGATATCGAGTCATCCAGG CAGAATCCGCAACGCCAATTGCTTCAATGCTTGTTGCTCGAGGCCGGAAT TCTCTTCCACAGTATTTTCATCGGAATGGCTCTCAGTGTTGCCACGGGTA CATCATTCATCGTCCTTCTTGTGGCTATCTGCTTTCACCAGACCTTTGAA GGATTTGCTCTCGGATCACGGATAGCGTCTCTGATCCCTGATCTCTTTCC CCCGTCATCGTACAGACCGTGGCTCATGGCGCTTGCCTATGGAACTACTA CCCCCATAGGGCAAGCTATGGGACTTGTTCTGCATAATCTTTATGATCCA GCAAGTACCACGGGCTTACTTACAGTGGGGATTACTAACGCCATCAGTAG CGGGCTATTATTATTTGCGGGGCTTGTTGAACTTCTAGCAGAGGATTTCC TTAGTGAATCAAGCTATGCGACGCTCAGGGGTCAACGGCGTGTCGAGGCT TGTGTAGCCGTTGCAGGAGGCGCTCTACTCATGGCATTTGTTGGGGCATT TGCCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1051184..1052140-

>ATCC64974_66220-T1 ID=ATCC64974_66220-T1|Name=ATCC64974_66220-T1|organism=Aspergillus niger N402|type=CDS|length=957bp|location=Sequence derived from alignment at OGUI01000010.1:1051184..1052140- (Aspergillus niger N402)
ATGGCCGGCTTCGTGGCTATGATCGCTGTATTTGTTGTAGTCCTCGTTGA
GATGTTCTTTGCATTGAAAGGTGCAGGTCATGTCCATGGGAGCGAATACG
ACCAGTTAATCAGCGACGTCGGTGCAGATTTCGCAAGTGACGATCAAGAC
GAAGACACTGATTACGGAACCGGATTGGCCGACAATGTCCACCTTGACAG
CCTTGGGGAAGACATGACTCTACGCTCTCCCGCGTCACTTGGAAGATCCC
CAGCTAATGGGCCTTCAAGGCCAACTAATAAGGACTCGGCTGTGCCAACC
GAACTCAACGACAGGGAGTTTGGAGAGTCACATACCTTTGAAGATACTCG
CATTAATGCCCAGAAGAATCGGGATGAGCAGCCGTGGCATTCTGATCGCC
GTCGGTCTCATGGTAGCGTACATCAAGGGACCGATATCGAGTCATCCAGG
CAGAATCCGCAACGCCAATTGCTTCAATGCTTGTTGCTCGAGGCCGGAAT
TCTCTTCCACAGTATTTTCATCGGAATGGCTCTCAGTGTTGCCACGGGTA
CATCATTCATCGTCCTTCTTGTGGCTATCTGCTTTCACCAGACCTTTGAA
GGATTTGCTCTCGGATCACGGATAGCGTCTCTGATCCCTGATCTCTTTCC
CCCGTCATCGTACAGACCGTGGCTCATGGCGCTTGCCTATGGAACTACTA
CCCCCATAGGGCAAGCTATGGGACTTGTTCTGCATAATCTTTATGATCCA
GCAAGTACCACGGGCTTACTTACAGTGGGGATTACTAACGCCATCAGTAG
CGGGCTATTATTATTTGCGGGGCTTGTTGAACTTCTAGCAGAGGATTTCC
TTAGTGAATCAAGCTATGCGACGCTCAGGGGTCAACGGCGTGTCGAGGCT
TGTGTAGCCGTTGCAGGAGGCGCTCTACTCATGGCATTTGTTGGGGCATT
TGCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_66220ATCC64974_66220Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66220-T1.cdsATCC64974_66220-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66220-T1.exon1ATCC64974_66220-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66220-T1ATCC64974_66220-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-30)
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1051184..1052140 -