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ATCC64974_6660-T1, ATCC64974_6660-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_6660-T1
Unique NameATCC64974_6660-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:2008811..2010529+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_6660-T1 ID=ATCC64974_6660-T1|Name=ATCC64974_6660-T1|organism=Aspergillus niger N402|type=mRNA|length=1719bp|location=Sequence derived from alignment at OGUI01000001.1:2008811..2010529+ (Aspergillus niger N402)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTATCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCAAGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGAAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCTAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAATTGTGGCGAGTGTTTGCGAACTTCCTTCGTCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCAGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCGCGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAATAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTTCACTGCCTCAGTTAGAACCTGGAAGGAGCTACAGGATGTTTTCTCGA
ATGATGTTGTCAGTAACGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:2008811..2010529+

>ATCC64974_6660-T1 ID=ATCC64974_6660-T1|Name=ATCC64974_6660-T1|organism=Aspergillus niger N402|type=CDS|length=1719bp|location=Sequence derived from alignment at OGUI01000001.1:2008811..2010529+ (Aspergillus niger N402)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTATCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCAAGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGAAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCTAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAATTGTGGCGAGTGTTTGCGAACTTCCTTCGTCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCAGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCGCGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAATAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTTCACTGCCTCAGTTAGAACCTGGAAGGAGCTACAGGATGTTTTCTCGA
ATGATGTTGTCAGTAACGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000287magnesium ion binding
GO:0016831carboxy-lyase activity
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_6660ATCC64974_6660Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6660-T1.exon1ATCC64974_6660-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6660-T1.cdsATCC64974_6660-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6660-T1ATCC64974_6660-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR011766
DBxrefInterPro:IPR012000
DBxrefInterPro:IPR012110
DBxrefInterPro:IPR012001
DBxrefPFAM:PF02776
DBxrefPFAM:PF00205
DBxrefPFAM:PF02775
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:2008811..2010529 +
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